<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Zhao (2012)
Title CRF22_01A1 is involved in the emergence of new HIV-1 recombinants in Cameroon.
Citation JAIDS
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 13
NumPts 13
Subtype A, CRF02_AG, F, G

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
ARC007 ARC007 RTI RTI A62V, K65R, V75I, F116Y, Q151M, M184I V108I, Y181C I31L, V35I, S68G, T69I, V90I, K104R, K122E, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, F214L, V245Q, T286A, A288T, E291D, V292I, I293V, S322A, G335D, R356K, M357K, G359S, T377M, K390R, T403M, Y405S, K431A, D471E, Q480H, A485S, L491S, Q509H, K512R, S519I, Q520K, I522T, Q524K, K527E, E529D, A534S, A554N, V559I  
ARC087 ARC087 None None   V35T, E36D, D121Y, K122E, D123G, I135V, S162C, E169D, K173A, Q174K, D177E, G196E, T200A, Q207A, R211S, V245Q, K277R, T286A, E291D, I293V, L310F, E312K, A327V, G335D, I341F, P345A, M357R, R358K, G359S, T369V, A371V, I375V, K390R, T403M, E432D, V435A, R461K, V467I, L469I, D471E, Q480H, H483Y, L491S, K512R, S515L, S519N, Q524K, K527E, A534S, A554S F346I, N363K 
BDSH129 BDSH129 None None   E6D, K11T, E28K, K32E, V35T, E36N, T39A, S68G, I135T, S162A, K173I, Q174N, D177E, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359S, T362S, A371V, I375V, V381I, T386I, K390R, T403M, E432D, V435A, A446S, L469I, D471E, Q480H, L491S, K512R, L517I, S519N, Q524K, K527E, E529N, A534S, A554K, K558R  
LB005 LB005 None None   K11T, L34I, V35T, T39N, V60I, D121Y, K122E, D123G, E169D, K173A, Q174K, D177E, G196E, T200A, Q207A, R211S, V245K, D250E, A272P, E291D, I293V, E312D, I326V, G335D, M357K, R358K, G359S, I375V, T377L, S379A, K390R, T403M, E432D, R448K, E449D, T470N, D471E, Q480H, H483Y, K512R, E514D, S519N, Q520L, Q524K, L525M, K527E, A534S, A554S  
LB011 LB011 None None   E6D, K11Q, V35T, T39K, K49R, D121H, K122E, I135T, S162C, E169D, K173T, Q174K, N175Y, D177E, G196E, T200A, Q207A, R211S, P243A, V245E, T286A, I293V, E297K, I329V, G335D, M357R, G359S, A371V, I375V, T377L, S379A, K388R, K390R, T403M, E432D, V435I, A446S, N447S, R461K, D471E, Q480H, H483Y, L491S, K512R, S519N, Q520L, Q524K, K527E, A534S, A554S  
LB013 LB013 None None   K11T, L34I, V35T, T39Q, V60I, D121Y, K122E, D123G, E169D, K173A, Q174K, D177E, G196E, I202V, Q207A, R211S, F214L, V245E, D250E, A272P, L283I, T286A, E291D, I293V, E312D, G335D, M357K, G359S, K366R, A371V, I375V, T386I, T403R, E432D, V435E, L452S, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, A534S  
LB045 LB045 None None   V35T, K122E, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, S322A, I326V, G335D, R356K, M357K, R358K, G359S, V365I, K366R, I375V, T403M, E432D, V435E, A437V, K454R, D471E, Q480H, H483Y, L491S, S519N, Q520L, Q524K, K527E, E529D, A534S, V548A, A554K, K558R  
LB052 LB052 None None   K104R, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, V245K, A272P, T286A, E291D, V292I, I293V, E312N, S322A, I326V, G333E, G335D, R356K, M357R, G359S, A371V, K390R, T403L, S468F, D471E, T477N, Q480H, L491S, K512R, S519N, Q520L, Q524K, K527A, E529D, A534S, A554N, K558R, V559I T472A 
LB054 LB054 None None   V35T, T39K, S68G, K122E, I135T, S162C, E169D, K173A, Q174K, D177E, G196E, Q207A, R211S, V245Q, E248D, K249Q, A272P, K281R, T286A, E291D, I293V, E297K, E312D, I326V, G335D, M357R, G359S, T369V, I375V, I380V, T386I, K390R, T403M, E432D, V435I, T470A, D471E, Q480H, H483Y, L491S, A502G, K512R, S519N, Q524K, K527E, A534S, A554S  
LPH27MF LPH27MF None None   I5V, K11T, V35T, T39R, E40D, S68G, D121Y, K122E, S162C, K173A, Q174K, D177E, G196E, Q207A, R211S, V245Q, D250E, S251D, T286A, I293V, E312N, E328D, G335D, M357R, G359S, T369V, I375V, A376S, K390R, T403M, E432D, K454R, T470A, D471E, Q480H, H483Y, L491S, I495V, K512R, S519N, Q524K, K527E, K530R, A534S, A554S  
LT31 LT31 None None   T27S, V35T, E40D, K49R, I50V, V60I, A98S, I135V, P170T, K173I, Q174K, T200A, Q207A, R211K, V245T, D250E, A272P, V276I, T286A, E291S, V292I, I293V, E297A, D320E, S322E, D324E, I329V, Q334L, G335E, F346Y, R356K, M357R, R358G, G359S, V365I, A371M, A376S, K390R, T403R, E413D, K431T, V435A, R448K, S468P, H483N, L491S, K512R, L517V, S519N, I526V, A534S, A554S  
LT66 LT66 None None   V35T, E40D, D123E, S162A, Q174K, D177E, I178M, T200A, Q207E, P243S, V245K, A272P, K275R, Q278H, K281R, E291D, I293V, P294T, E297A, L303M, G335D, F346H, R356K, M357R, R358K, G359S, T362P, T386I, K390R, A400T, K431T, E432D, V435L, K454R, D471E, H483Q, L491S, L503I, Q509H, S519N, K527Q, A534S, A554S  
NYU488 NYU488 None None   V35T, E36D, D121Y, K122E, D123G, I135V, S162C, E169D, K173A, Q174K, D177E, G196E, T200A, Q207A, R211S, V245Q, K277R, T286A, E291D, I293V, E312D, A327V, G335D, I341F, M357R, R358K, G359S, T369V, A371V, I375V, K390R, T403M, E432D, V435A, T450N, R461K, V467I, L469I, D471E, Q480H, H483Y, L491S, K512R, S515L, S519N, Q524K, K527E, A534S, A554S