<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Foster (2014)
Title Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: the identification and phylogeography of circulating recombinant form (CRF) 50_A1D.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 6
NumPts 6
Subtype A

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
11762 11762 None None   E28R, K32E, V35T, V60I, K122E, D123S, I135T, S162A, T165I, K173S, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, D250E, I257V, T286A, E291D, I293V, P294T, L295M, E312D, G335D, M357N, G359S, A371V, I375V, T377M, K390R, A400T, T403M, E404D, E432D, V435E, A446AT, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S  
12792 12792 None None   V35T, T39A, E40D, K43E, S48T, V60I, R78X, D121H, K122E, S162A, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, D250E, L283I, V292I, I293V, P294T, E297A, E312D, G335D, M357K, G359S, K366R, T369V, A371V, I375V, A376T, T377R, K390R, A400T, T403M, E404D, E432D, V435E, T470N, D471E, K476M, Q480H, Q509L, E516G, S519N, Q524K, K527E, E529D, A554S E29Q, G490R 
33365 33365 None None   V35T, E40D, V60I, D121H, K122E, I135T, S162A, K173S, Q174N, T200A, Q207A, R211S, D250E, A272P, K277R, E291D, V292I, I293V, P294T, E312D, G335S, M357N, G359S, A371V, I375V, K390R, T397P, E399K, A400X, T403M, E404D, E432X, T450N, D471E, Q480H, L491S, E516AG, S519N, Q524E, K527G, E529D, A534S, A554S L391~, F416I 
34567 34567 None None   V35T, E40D, K49KR, V60I, V106VI, L109LM, D121H, K122E, T200A, Q207A, R211G, D250E, K277R, I293V, E297K, K311R, G335D, M357K, G359S, K366R, T369V, A371V, I375V, A376T, T377M, K390R, A400T, T403M, E404D, E432D, V435E, D460N, R461K, S468T, H483Y V108VG, V111G, D113DE, A114AP, Y115Y*KN 
40534 40534 None None   V35T, V60I, D121H, K122E, D123G, I135T, S162A, K173S, Q174N, D177E, V179I, T200A, Q207A, R211S, D250E, K277R, E291D, V292I, I293V, P294T, E312D, G335D, M357K, G359S, K366R, T369V, A371V, I375V, A376T, T377M, K390R, A400T, T403M, E404D, E432D, V435E, S468P, D471E, Q480H, L491S, S519N, Q524K, K527E, E529D, A534S, A554S  
8179 8179 None None   V35T, E40D, V60I, D121H, K122E, D123G, I135T, S162A, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, D250E, E291D, V292I, I293V, P294T, E312D, G335D, M357K, G359S, K366R, T369V, A371V, I375V, A376T, T377M, K390R, T397P, A400T, T403M, E404D, E432D, V435E, A437X, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S