Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Chung (2014)
Title Oligonucleotide ligation assay detects HIV drug resistance associated with virologic failure among antiretroviral-naive adults in Kenya.
Citation JAIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 48
NumPts 48
Subtype A, C, D, CRF35_AD, CRF18_cpx, G, B


Clinical PR Isolates

KAX_37_KA301e KAX_37_KA301e None    E35D, M36I, N37D, R41K, K43R, R57K, L63C, E65D, H69K, L89M  
KAY_37_KA322e KAY_37_KA322e None    M36I, N37K, R41N, H69K, L89M, I93L  
KBT_31_KA310e KBT_31_KA310e None    E35D, M36I, R41K, R57K, L63T, H69K  
KDP31_RT_108e KDP31_RT_108e None    L63P, H69K, I93L  
KDP33_RT_123e KDP33_RT_123e None    K43R, L63A, H69K, T74S, V82VI, L89M, I93L  
KDP34_RT_124e KDP34_RT_124e None    M36I, R41K, L63S, H69K, L89LM, I93L  
KDP_38_KA131e KDP_38_KA131e None    E35D, M36I, N37D, R41K, R57K, D60E, H69K, K70R, L89M  
KEL36_RT_148e KEL36_RT_148e None    L63T, H69K, V82I, L89M, I93L  
KEL_34_KA142e KEL_34_KA142e None    R41K, R57K, I62V, L63I, I64L, H69K, L89M  
KEW32_RT_160e KEW32_RT_160e None    E35D, M36I, R41K, I62V, H69K, T74S, V77VI, L89M  
KEW34_RT_163e KEW34_RT_163e None    N37D, R57K, L63T, H69Q, L89M  
KFN41_RT_185e KFN41_RT_185e None    E35D, M36I, R41K, R57K, Q61E, H69K, T74A, L89M  
KGK31_RT_188e KGK31_RT_188e None    E35D, M36I, N37D, R41K, L63LV, E65D, H69K, L89M  
KGK40_RT_198e KGK40_RT_198e None    M36I, N37K, R41N, L63T, H69K, L89M, I93L  
KGL33_RT_204e KGL33_RT_204e None    M36I, R41K, D60E, L63P, H69K, L89M, I93L  
KGL36_RT_210e KGL36_RT_210e None    E35D, M36I, N37D, R41K, R57K, L63T, E65D, H69K, L89M  
KGL_38_KA214e KGL_38_KA214e None    M36I, R41K, I64V, K70R  
KGL_41_KA218e KGL_41_KA218e None    I13V, E35D, M36I, R41K, R57K, E65D, H69K, L89M  
KTA_31_KA120e KTA_31_KA120e None    R41K, L63V, H69K, I72V, P79S, V82I, L89M, I93L  
KTA_32_KA127e KTA_32_KA127e None    L63P  
KTA_34_KA152e KTA_34_KA152e None    M36I, R41K, R57K, D60E, L63P, H69K, V82VI, I93L  
KTA_36_KA231e KTA_36_KA231e None    E35D, M36I, K45R, R57K, L63T, C67Y, G68E, H69R, L89M  
KTA_42_KA243e KTA_42_KA243e None    M36L, R41K, R57K, D60E, I62V, L63P, I64V, V77I  
KTF_32_KA246e KTF_32_KA246e None    M36I, R41K, I62V, L63P, I72V  
KTF_33_KA247e KTF_33_KA247e None    R41K, L63V, H69K, L89M  
KTF_34_KA249e KTF_34_KA249e None    E35D, M36I, R41K, R57K, I62V, L63T, H69K, T74S, L89M  
KTF_39_KA256e KTF_39_KA256e None    I13V, L19I, E35D, M36I, R41K, R57K, I62V, L63T, H69K, L89M  
KTF_42_KA261e KTF_42_KA261e None    I13V, K14KR, E35D, R41K, L63P, I64V, K70R  
KTH_33_KA265e KTH_33_KA265e None    E35D, M36I, R41K, R57K, H69K, L89M  
KTH_37_KA271e KTH_37_KA271e None    E35DG, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
KTH_42_KA280e KTH_42_KA280e None    E35D, M36I, R41K, R57K, H69K, L89M  
KTI_37_KA308e KTI_37_KA308e None    E35D, M36I, N37D, R41K, R57K, D60E, I62IV, H69K, L89M  
KTI_38_KA300e KTI_38_KA300e None    L19T, E35D, M36I, R41K, K45R, L63P, H69K, I72T, V82I, L89M, I93L  
KTL_33_KA329e KTL_33_KA329e None    P39T, R41K, D60E, L63P  
KTL_37_KA340e KTL_37_KA340e None    T12S, I15V, L19I, M36I, N37K, R41N, L63P, H69K, L89M, I93L L23LF 
KTL_38_KA341e KTL_38_KA341e None    E35D, M36I, R41K, H69K, K70R, L89M  
KTV_37_KA381e KTV_37_KA381e None    I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
KUB_39_KA427e KUB_39_KA427e None    I13V, L19Q, E35D, M36I, N37D, R41K, R57K, Q61N, H69R, V77VI, L89M  
KUF_34_KA436e KUF_34_KA436e None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
KUF_40_KA443e KUF_40_KA443e None    M36I, R41K, L63T, H69K, I72T, I93L  
KUF_43_KA438e KUF_43_KA438e None    I13V, K20I, M36I, N37S, R41K, R57K, L63P, C67S, H69K, V82I, L89M  
KUF_44_KA383e KUF_44_KA383e None    I13V, K14R, I15V, E35D, M36I, N37E, R41K, K43KR, R57K, H69K, K70R, L89M  
KVE_34_KA453e KVE_34_KA453e None    K14R, E35D, M36I, R57K, L63T, H69K, V77I, L89M  
KVO_35_KA476e KVO_35_KA476e None    E35D, M36I, N37E, R41K, R57K, I62V, L63S, H69K, K70R, L89M  
KWV_33_KA497e KWV_33_KA497e None    I13V, M36I, R41K, I64V  
LJJ_1_KA221e LJJ_1_KA221e None    I64V  
LJJ_2_KA222e LJJ_2_KA222e None    M36I, R41K, I62V, L63H, I64V, I72V, V77I  
LJJ_3_KA227e LJJ_3_KA227e None    M36I, R41K, L63Q, I64V, E65D, I72V