Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Kouri (2012)
Title High frequency of antiviral drug resistance and non-B subtypes in HIV-1 patients failing antiviral therapy in Cuba.
Citation J Clin Virol
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 278
NumPts 278
Subtype B, G, D, C, CRF18_cpx, A, F, CRF02_AG, CRF45_cpx, H, CRF35_AD, K, CRF04_cpx, CRF12_BF, J, A + G


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Page 1   listing Isolate 1 to Isolate 100 from Total 278 Clinical PR Isolates

CU100-10 CU100-10 PI    I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64IM, H69K, L89IM  
CU101-10 CU101-10 PI    I15V, E35D, I72V  
CU1023-09 CU1023-09 PI  M46I, I54V, V82T, I84V L89V L10I, I13A, K14R, K20IV, M36I, N37D, R41K, K55R, R57RG, I66F, H69K, T74S G73E, T80V 
CU1024-09 CU1024-09 PI    I13V, L63P  
CU108-10 CU108-10 PI  V32I, I54L, I84V L33F, K43T, F53L L10I, I13V, I15S, L19LI, K20R, E35D, M36I, R41K, D60E, Q61E, I62V, L63T, I64IV, H69K, A71AV, T74A, P79A, L89M  
CU111-11 CU111-11 PI  M46I, L76V, L90M  L10V, R41K, K55R, D60E, I62V, L63P, I64V, A71V, I72T, V77I, L89M, I93L  
CU112-11 CU112-11 PI  M46MIL, I54V, V82A  L10V, T12V, I15V, K20R, E35D, M36I, N37D, R41K, L63P, T91TS  
CU1162-09 CU1162-09 PI    L10I, E35D, M36I, R41K, I62V, L63P, H69Q, K70Q, I72IV, I93L  
CU1163-09 CU1163-09 PI  M46ML, L90M  I13V, G16E, K20I, E35N, R41K, H69K, K70KR, L89M M36IR 
CU117-10 CU117-10 PI    L10V, I15IV, E35D, M36I, R41K, L63P, H69Q, I72V  
CU1191-10 CU1191-10 PI   L33LI T4N, L5F, L10I, T12A, I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M R8G 
CU1267-09 CU1267-09 PI    T12A, I15IV, L19I, E35D, M36I, N37D, R41K, K43R, D60E, I62IV, L63P, I64IV, H69Q  
CU1270-09 CU1270-09 PI    I15V, G16E, K20M, P39S, R41K, K43R, Q61N, L63P, V77I  
CU1304-10 CU1304-10 PI    I13V, I62V, L63S, I64V R8G 
CU1315-09 CU1315-09 PI  I54V, L90M F53L, L89V I13V, K14R, K20I, E35D, M36I, N37D, R41K, K45R, L63P, C67CY, H69K, A71I  
CU1316-09 CU1316-09 PI  I84V, L90M  E35D, M36I, R41K, L63P, H69K, L89M, I93L  
CU1326-09 CU1326-09 PI  I54V, V82T, L90M L33F, F53FL L10V, I13V, K20V, E35N, M36I, N37D, R41K, K45V, K55N, L63P, H69K, T74S, L89M  
CU1341-10 CU1341-10 PI    E35D, M36I, R57K, I62V, L63P, A71T  
CU1342-10 CU1342-10 PI    I13V, K14R, K20I, E35D, M36I, R41K, K43R, L63P, H69K, V82I, L89M  
CU1373-09 CU1373-09 PI  V32I, M46L, L76V, V82A L10F, L33F, L89V I13V, K20R, M36I, N37D, R41K, K43R, Q61N, L63P, A71V, Q92K  
CU1383-10 CU1383-10 PI  G48V, I54V, V82C, L90M  L10I, E34K, R41K, I62V, L63H, H69Y, A71V, I72V, V77I, I93L  
CU1389-10 CU1389-10 PI  D30N, L90M N88D I13V, N37S, R41K, L63PS, I64V, A71V, V77I  
CU1425-10 CU1425-10 PI    L10LI, I13V, G16E, P39S, I62V, L63H, I64V, V77I  
CU1462-10 CU1462-10 PI    I13V, G16E, M36ML, N37S, P39PS, I62V, L63H, I64V  
CU147-10 CU147-10 PI  M46MI, I50IV, L90LM  L10IV, I13IV, K14R, Q18QR, M36MI, N37NS, D60DE, L63LP, A71AV, L89LM  
CU1484-09 CU1484-09 PI    W6G, I15V, Q18E, K20R, E35D, M36I, R41K, K43R, I62V, L63P, H69Q  
CU1497-09 CU1497-09 PI    I15V, Q18R, K20R, M36I, R41K, K43N, I62V, L63P, H69Q L23K, I85M 
CU1511-10 CU1511-10 PI    P1L, I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, L89M  
CU1548-10 CU1548-10 PI    I13V, K14R, I15V, K20I, E35D, M36I, P39PQ, R41K, L63V, I64M, H69K, I72IV, V82I, L89M  
CU1627-09 CU1627-09 PI  I54V, V82A, I84V, L90M  L10I, K20I, E35G, M36I, R41K, D60E, I62V, L63P, H69HQ, A71V  
CU1629-09 CU1629-09 PI    I15IL, Q18L, L19I, E35D, M36I, I62V, L63P, H69Q, I72V  
CU1640-09 CU1640-09 PI    M36I, R41K, K43R, L63P, H69Q  
CU165-11 CU165-11 PI    I13V, K14R, K20I, E35D, M36I, N37ND, R41K, H69K, V82I, L89M  
CU1673-09 CU1673-09 PI    G16E, M36I, N37ND, R41K, D60E, I62V, L63P, H69Q  
CU1692-10 CU1692-10 PI    L10I, T12P, I13V, K14R, K20I, E35D, M36I, L63P, C67S, H69Q, V82I, L89M  
CU1803-09 CU1803-09 PI    L63P  
CU1804-09 CU1804-09 PI    T12K, I13V, L63A  
CU1877-10 CU1877-10 PI    I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU1895-10 CU1895-10 PI    E35D, R41K, R57K, L63P, V82VI, I93L  
CU1913-09 CU1913-09 PI  L90M  E35D, N37S, R41K, L63P, H69K, L89M, I93IL  
CU1916-10 CU1916-10 PI  G48V, V82C, L90M L33LF, G73S L10I, I62V, L63PS, A71V, I72IV, V77I  
CU1920-09 CU1920-09 PI    N37ND, L63P, I64L  
CU196-11 CU196-11 PI    I13V, I15V, K20I, E35N, M36I, P39Q, R41K, H69K, V77I, L89M  
CU1997-10 CU1997-10 PI  I84V, L90M  L10I, I13V, L63P, A71V, I72V, V77VI  
CU2041-09 CU2041-09 PI  M46I, I54V L33I, G73S I13V, K14R, K20I, E35D, M36I, H69K, A71V, T74S, V75I, L89T  
CU2068-10 CU2068-10 PI    I15V, M36MI, K45R, V77I, I93L  
CU2103-09 CU2103-09 PI    I13V, K14R, I15V, K20I, E35EDKN, M36I, R41K, L63V, I64M, H69K, I72E, V82I, L89M  
CU2105-09 CU2105-09 PI    T4S, K14R, G16E, E35D  
CU2137-09 CU2137-09 PI    I13V, K14R, K20I, E35D, M36I, N37D, H69K, K70Q, L89M, T91V  
CU2142-09 CU2142-09 PI    L10I, K20R, E35D, M36I, L63P, I93L  
CU234-10 CU234-10 PI   V11VI L10I, I13AV, K14R, K20I, E35D, M36I, R41K, I64M, H69K, V82I, L89M  
CU25-10 CU25-10 PI  M46L, I54V, V82A, L90M L33F, K43T, F53L, G73S L10V, I13V, L19LI, K20R, E35D, M36I, N37D, R41K, K55R, L63P, H69K, K70T, A71I, I93L  
CU263-10 CU263-10 PI  V32I, I54M, I84V V11I, L33F, F53FL L5LF, L10V, I13V, K14E, I15V, G17D, K20R, E35D, M36I, R41K, K45R, R57K, D60E, Q61N, L63P, I64V, A71V, T74E, V82I Q2L 
CU269-11 CU269-11 PI    L10I, I13V, K14R, I15V, L19S, K20I, E35D, M36I, D60E, Q61E, L63P, C67N, H69K, L89M  
CU272-10 CU272-10 PI    L10LI, I13IV, K14KR, G16GE, K20I, N37NS, H69K, K70KR, V77VI, L89LM, I93IL  
CU294-10 CU294-10 PI  M46L, I54V, I84V Q58E, L89V I13A, L19P, K20I, A22V, L33V, E35D, M36I, N37D, I62IV, L63P, I66F, H69K, A71V, T74A, Q92K, I93IV  
CU300-10 CU300-10 PI    I13IV, I15V, G16GE, Q18R, K20KR, E35D, M36MI, N37NS, R41K, I62IV, L63LP, H69K, K70KR, T74TS, V77VI, L89M, I93IL Q7P 
CU310-10 CU310-10 PI  L90M  L10I, I13IV, E35D, N37S, R41K, L63P, H69K, L89M, I93L  
CU322-11 CU322-11 PI    E35D, M36I, R41K, K43R, Q61H, I62V, L63P, H69Q, V82I  
CU345-10 CU345-10 PI  I54IV, V82VA  W6G, L10I, K20R, E35D, M36I, R41K, Q61DN, L63P, H69Q, K70T, I93L  
CU35-10 CU35-10 PI  I54IV, V82T  L10I, I13V, K20IM, E35D, M36I, N37D, R41K, Q61N, C67Y, H69K, T74S, L89M  
CU373-10 CU373-10 PI  M46I, I54V, L76V, V82A L24I, L33F L10I, I13V, K20R, E35D, M36I, N37D, R41K, D60E, I62V, L63P, A71V, I93L  
CU377-10 CU377-10 PI  I54V, V82A, L90M  L10I, I13V, K20R, M36I, I62V, L63P, H69Q, A71V, I72L, I93L, C95F  
CU404-10 CU404-10 PI    P1L, L10V, I13V, K14R, G16E, E35D, N37T, R41K, L63H, I64V  
CU406-10 CU406-10 PI    I13V, K14R, K20I, M36I, R41K, C67E, H69R, V82I, L89M  
CU424-11 CU424-11 PI    I13V, K14R, G16E, K20I, E35D, M36I, Q61E, H69K, L89IM, Q92K  
CU431-10 CU431-10 PI  M46I, L90M L33I, N88D I13V, E35D, I62V, L63P, A71T  
CU459-10 CU459-10 PI  V32I, M46I, I47V, I54M, V82A, L90M L33F, K43T, Q58E T4P, L10I, I13V, G16E, K20R, E35D, M36I, L63H, K70E, A71V, I72T, I93M  
CU467-11 CU467-11 PI    L10I, I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU483-10 CU483-10 PI    T12P, I13V, K14R, G17GE, L19I, K20I, E35D, M36I, N37D, R41K, C67H, H69K, V82I, L89M  
CU484-10 CU484-10 PI    I13V, K14R, G16E, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M, T91A, F99L  
CU503-10 CU503-10 PI    E35D, M36I, R41K, K43R, L63P, H69Q, I72V  
CU522-10 CU522-10 PI  M46I, I54L, V82A, L90M L33F, T74P I13V, N37S, R41K, K55R, I62V, L63P, H69K, L89M, I93L  
CU524-11 CU524-11 PI    I13V, I15V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU543-11 CU543-11 PI    T12A, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
CU547-11 CU547-11 PI    I13V, K14R, M36I, N37D, R41K, K43R, Q61E, L63P, H69Q  
CU564-11 CU564-11 PI    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU565-11 CU565-11 PI    I13V, K14R, M36I, K43KR, I62V, L63P  
CU572-10 CU572-10 PI    I13V, K14R, K20I, E35N, M36I, R41K, H69K, V82I, L89M  
CU582-09 CU582-09 PI  M46L, I54M, V82A, L90M L33F L5S, L10I, N37ND, R41RK, K55R, R57K, L63P, A71V, V77I, I93L, C95F T4H 
CU585-10 CU585-10 PI    L10N, K14R, L19I, N37S, R41K, C67D, H69K, L89M, I93L  
CU600-09 CU600-09 PI  I84V, L90M G73T L10I, I13V, I62V, L63P, I64V, A71T  
CU604-11 CU604-11 PI    I13V, K14R, I15IV, K20I, E35D, M36I, R41K, D60E, H69K, T74S, L89M  
CU605-11 CU605-11 PI    T4TN, I13V, K14R, I15V, K20I, E35D, M36I, R41K, K45KR, L63P, H69K, K70Q, L89M  
CU606-10 CU606-10 PI  M46L, I84V L10F, L33F I13V, K14R, P39Q, L63PT, K70T, T74S, P79S, L89M  
CU606-11 CU606-11 PI    M36I, L63P, H69K, L89M, I93L  
CU626-10 CU626-10 PI    I13IV, I15V, L19Q, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
CU669-10 CU669-10 PI    Q2P, L19I, E35D, R41K, D60E, Q61E, I62IV, L63P, I93L R8G 
CU672-11 CU672-11 PI    I13V, K14R, G16E, K20I, E35N, M36I, R41K, F53Y, I64M, H69K, K70R, L89M  
CU691-09 CU691-09 PI  D30N, V32I, M46I, I47V, I54L, V82A L10LF, L33F, F53FL, Q58E, N88D I13V, I15V, L19I, K20R, E35D, M36L, N37T, R41T, K45R, D60E, L63P, H69Q, K70R, I72V, V77I, L89F  
CU724-11 CU724-11 PI    I13V, N37S, L63P, V77I  
CU727-09 CU727-09 PI  G48V, I54V, V82A F53L L10I, I13V, I15V, K20I, E35D, M36I, R41K, I64M, H69K, T74S, L89M  
CU738-10 CU738-10 PI  M46I, I50V, I54L L33F, T74P W6C, I13V, K43Q, L63P  
CU745-10 CU745-10 PI  I54T  W6G, I13V, K14R, G16A, K20I, E35D, M36I, R41K, K45T, L63P, H69K, K70R, V82I, L89M R8G 
CU749-09 CU749-09 PI  M46L, I84V N83D L10I, I15V, G16E, K20R, M36I, R41K, D60E, I62IV, L63T, V82I, L89LF  
CU75-11 CU75-11 PI    I13V, K14R, K20I, E35D, M36I, R41K, I64V  
CU799-09 CU799-09 PI  M46I, I54L, I84V, L90M L10F, L33F, G73S L19I, E34Q, N37S, K55N, I62V, L63P, I66F, C67Y, H69Q, A71V, I72K, V77I, P79PS, I93L  
CU845-09 CU845-09 PI   L33F, I50IS, N88D M36I, R41K, D60E, I62V, L63P, H69Q, A71T  
CU881-10 CU881-10 PI  I50V, I54V L33F I13V, K20T, E35D, M36I, R41K, D60E, Q61E, I66F, H69K, K70R, L89M  
CU962-10 CU962-10 PI    T4I, I13V, K14E, K20I, E35D, M36I, R41K, H69K, V82I, L89M R8G