Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Sigaloff (2013)
Title Short communication: high rates of thymidine analogue mutations and dual-class resistance among HIV-infected Ugandan children failing first-line antiretroviral therapy.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 44
NumPts 44
Subtype A, D, CRF05_DF, B, CRF35_AD, CRF45_cpx, CRF02_AG, C


Clinical PR Isolates

JCR011_0 JCR011_0 None    M36I, N37D, L63Q, I64V  
JCR017_0 JCR017_0 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
JCR022_0 JCR022_0 None    I13V, K20M, E35N, M36I, R41K, I64V, H69Q  
JCR024_0 JCR024_0 None    I3N, I13V, M36I, R41K, I64V  
JCR046_0 JCR046_0 None    I13V, M36I, R41K, L63Q, I64V  
JCR047_0 JCR047_0 None    P1L, L10V, I13V, G16A, K20M, M36L, R41K, I64V, V75I  
JCR049_0 JCR049_0 None    I3N, I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M  
JCR061_0 JCR061_0 None    I15V, E35D, M36I, R41K, R57K, H69K, L89I  
JCR066_0 JCR066_0 None    I3N, L10I, I13V, E35D, M36I, R41K, H69Q, L89M  
JCR070_0 JCR070_0 None    L10I, I13V, G16E, G17X, E35D, M36I, P39S, R41K, H69K, K70R, L89M  
JCR073_0 JCR073_0 None   L33I I13V, M36T, R41K, D60E, I62V, L63V, I64V, E65D, K70R  
JCR077_0 JCR077_0 None   Q58E I13V, M36L, R41K, R57K, L63P, I64V  
JCR079_0 JCR079_0 None    I13V, K14R, K20M, E35D, M36I, R41K, L63P, H69K, L89M  
JCR083_0 JCR083_0 None    I3N, L10V, G16E, K20R, M36I, P39T, R41K, H69K, L89M  
JCR092_0 JCR092_0 None    I13V, K20R, M36I, R41K, L63Q, I64V, H69C  
JCR093_0 JCR093_0 None    L10V, I13V, G17E, Q18*, N37S, P39S, R41K, D60E, I62V, L63P, I64V, K70R, V77I  
JCR099_0 JCR099_0 None    L10V, I13V, G16E, E35D, M36I, P39S, R41K, I62V, L63S, I64V, E65D  
JCR101_0 JCR101_0 None    I3N, I13V, K14R, I15V, R41K, L63Q, I64V, V82I  
JCR104_0 JCR104_0 None    L5F, I13V, I15V, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
JCR109_0 JCR109_0 None    I13V, E35E_D, M36I, R41K, R57K, L63S, I64M, H69K, L89M  
JCR111_0 JCR111_0 None    L10V, I13V, M36I, R41K, I62V, L63S, I64V  
JCR113_0 JCR113_0 None    L10V, I13V, M36I, R41K, I62V, L63A  
JCR116_0 JCR116_0 None    I13V, G16E, E35D, M36I, R41K, K45R, R57K, H69K, K70R, L89M  
JCR117_0 JCR117_0 None    I13V, E35D, M36I, R41K, H69K, L89M  
JCR118_0 JCR118_0 None    I13V, E35D, R41K, L63S, I64V  
JCR120_0 JCR120_0 None    L10V, T12A, I13V, K14R, G16E, K20I, M36I, N37S, R41K, Q61E, L63S, H69K, I72T, L89M  
JFP048_0 JFP048_0 None    L10V, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M  
JFP058_0 JFP058_0 None    I13V, G16E, K20R, M36I, P39S, D60E, I62V, L63P, I64V, I72V  
JFP103_0 JFP103_0 None    I13V, K14R, G16E, E35D, M36I, R41K, R57K, L63H, H69K, K70R, L89M L10A 
MBA005_0 MBA005_0 None    I3N, E35D, M36I, N37E, R41K, R57K, D60E, H69K, L89M  
MBA031_0 MBA031_0 None    L10I, I13V, R41K, I64V  
MBA036_0 MBA036_0 None    L10V, I13V, M36I, R41K, L63P, I64V  
MBA041_0 MBA041_0 None    Q2S, I3N, G16A, E35D, M36I, R41K, H69K, L89M  
MBA043_0 MBA043_0 None    L10I, I13V, R41K, I64V I3K, T4H 
MBA046_0 MBA046_0 None    I3N, L10I, I13V, I15V, E35D, M36I, R41K, R57K, L63V, H69K, L89M  
MBA047_0 MBA047_0 None    L10M, I13V, M36I, R41K, C67Y, H69K, L89M  
MBA049_0 MBA049_0 None    L10V, I13V, R41K, D60E, I64V, V77I, N98I  
MBA054_0 MBA054_0 None    I3N, I13V, E35D, M36I, R41K, R57K, D60E, H69K, L89M  
MBA059_0 MBA059_0 None    I13V, I15V, K20R, M36I, N37K, R41N, L63T, H69K, P79D, V82I, L89I, I93L  
MBA063_0 MBA063_0 None    G16E, K20R, E35D, M36I, R41K, R57K, L63S, H69K, L89M  
MBA064_0 MBA064_0 None    I3N, I13V, L19I, E35D, M36I, R41K, L63P, H69K, K70R, L89M  
MBA079_0 MBA079_0 None    L10I, T12I, I13V, E35D, M36I, R41K, R57K, I62V, L63P, I64L, H69K, L89M  
MBA093_0 MBA093_0 None    I15V, M36I, R41K, I64V  
MBA094_0 MBA094_0 None    I13V, M36I, N37D, L63T, I64V, E65D, K70R, I72V