Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Monno (2005)
Title HIV-1 subtypes and circulating recombinant forms (CRFs) from HIV-infected patients residing in two regions of central and southern Italy.
Citation J Med Virol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 44
NumPts 44
Subtype CRF02_AG, C, F, CRF01_AE, G, A, J, B, CRF06_cpx, CRF09_cpx


Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
Coc44 Coc44 Unknown Unknown   V35T, K104KR, D123E, I135V, S162C, Q207E, R211RK, V245Q, D250E, A272P, K281KR, T286TA, E291D, V292I, I293V, E297I, K311R  
Dem76 Dem76 Unknown Unknown   V35K, V60I, I135V, E138A, S162A, K173T, Q174K, D177DE, T200A, Q207E, R211RK, F214L, V245VILM, E248ED, K281R, T286A, E291D, V292I, I293V, P294T, S322P  
Dia65 Dia65 Unknown Unknown   V35T, K49R, K122KE, D123DN, I135T, S162A, K173T, D177E, I178M, T200TA, Q207E, R211K, T286A, E291ED, V292I, I293V, P294T, S322T  
Gar71 Gar71 Unknown Unknown   E6D, K20KR, V35T, T39TK, I135L, S162Y, E169D, K173A, Q174K, D177EG, T200A, Q207E, R211K, V245Q, E248DN, A272P, V276VI, Q278H, T286A, E291D, V292I, I293V, E297V  
Gufr Gufr Unknown Unknown M184MV  E28EK, V35T, T39EK, S48T, K122E, D123GRS, I135T, K173A, D177E, G196K, T200A, Q207E, R211K, V245Q, E248D, A272P, K277KR, L283LI, T286TA, E291D, V292I, I293V, V317A, Q334N, G335D, R356K, G359T, A371V, I375T, T377M, T386I, K390R  
Huk63 Huk63 Unknown Unknown   V35T, E36A, T39E, S48T, K122E, D123S, I135T, K173A, D177E, I178V, G196K, T200A, Q207E, R211K, V245Q, E248N, A272P, T286A, E291D, V292I, I293V, V317A  
Min70 Min70 Unknown Unknown K219Q  V35T, T39A, D123E, I135V, S162C, E169D, K173A, Q174K, D177E, T200A, Q207E, R211K, D218E, A272P, K277R, T286A, E291D, V292I, I293V, E297T, V314VL, V317A, S322A A299AP 
Osa68 Osa68 Unknown Unknown   K32R, V35IT, V60I, K122E, S162A, E169KR, K173E, Q174N, D177E, I178M, R199RK, T200E, R211K, V245Q, E248D, A272P, K275R, Q278N, L283I, T286V, E291D, V292I, I293V, E297AT  
PACE600607 PACE600607 Unknown Unknown   V35VI, K101KR, V118I, D123E, I135T, I178V, I202V, E204D, Q207K, R211G, F214L, A272P, K281KR, T286P, E297K, S322T M41MR 
Plo57 Plo57 Unknown Unknown   V35T, E36D, T39TK, K122Q, I135V, S162A, K173T, Q174EK, D177E, T200A, I202IV, E203ED, Q207DE, R211K, V245Q, E248D, K275R, T286A, E291D, I293V, P294T, E297K, A304T, S322T  
s03-918 s03-918 Unknown Unknown  V179D, Y181P T27A, V35LM, K43R, E44K, G45E, K122KAET, S162A, K173T, Q174K, D177E, I180L, I195L, T200A, Q207E, R211K, P243PT, V245Q, E248EDKN, S251SHNR, T286A, E291D, V292I, I293V, P294T, L303I Q182I, E302~ 
s03-919 s03-919 Unknown Unknown   V35T, K102Q, I135V, S162A, K173A, Q174K, D177E, I178V, T200A, Q207E, V245K, E248D, K281R, T286A, E291D, V292I, I293V, P294T, S322T F87S 
s03-920 s03-920 Unknown Unknown   I5IM, T7TI, K32KQ, V35K, E36X, T39E, S48SFL, K49R, D121DE, K122KE, D123DN, F124FL, I135L, T139V, S162A, K173AT, Q174KR, D177E, T200A, Q207AGV, R211K, V245Q, E248ED, D250N, T286A, E291D, I293V, P294T, R307K, S322T P1PA, I2IKN, S3SCFI, L34L*, Y115YN, L120L*, R125R*, Y127Y*KN, Q222Q* 
s03-921 s03-921 Unknown Unknown   V35M, E36EA, T39E, S48T, K122E, D123S, A158S, K173A, D177E, T200A, Q207E, R211K, V245VELQ, E248ED, D250DE, S251SN, A272P, K277KR, E291D, V292I, I293V  
s03-922 s03-922 Unknown Unknown M184MV G190GR V35AT, D121DN, D123E, E169ED, P170PL, K173T, Q174QK, D192DN, Q207A, H208HY, V245Q E89EK, G93GEKR, D113DN, G152GE, D186DN 
s03-923 s03-923 Unknown Unknown M41L, D67DN, L210W, T215Y L100I, K103N E28K, V35IT, T39A, E53EQ, V118I, K122E, I135T, K173T, Q174K, G196E, Q207E, L228LR, K238R, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, E297T, D324E  
s03-924 s03-924 Unknown Unknown   T39E, E40D, K49KR, I50IV, K122E, D123G, A158S, K173T, Q174K, D177E, I178IM, T200A, Q207E, R211RK, V245Q  
s03-925 s03-925 Unknown Unknown   V35T, E36D, K122E, D123N, S134G, F171Y, K173A, Q174K, D177E, I178M, G196E, T200A, Q207D, F214L, P243L, V245Q L246R 
s03-926 s03-926 Unknown Unknown  V108VI W88C, D121H, K122E, I135V, S162A, S163ST, T165I, K173AST, Q174KR, D177E, I178ILM, T200A, Q207E, R211K, F214L, V245Q  
s03-927 s03-927 Unknown Unknown   V35T, E36Q, T39A, K43E, D121H, K122E, I135T, S162C, K173A, Q174K, D177E, G196E, T200R, Q207E, R211K, V245Q, D250E, S251D, A272P, K281R, T286A, E291D, V292I, I293V, E297K, S322T, D324E D17DHY 
s03-928 s03-928 Unknown Unknown   V35T, E36A, T39E, S48T, K122E, D123GS, A158S, K166KR, K173A, D177E, I178L, T200A, K201R, E203ED, E204K, Q207E, R211K, P243T, V245Q, A272S, K277R, T286TA, E291D, V292I, I293V  
s03-929 s03-929 Unknown Unknown   E6EK, K11A, V35M, T39K, K43E, K49R, K64R, A158S, K173T, Q174K, D177E, I178M, T200A, Q207E, V245Q, D250E, S251D, A272P, Q278H, T286A, A288T, E291D, V292I, I293V, E297A, V317A  
s03-930 s03-930 Unknown Unknown   T39E, K122E, D123S, I142IV, K166KR, K173AITV, Q174KN, D177E, I178L, T200A, Q207E, R211RK, V245Q  
s03-932 s03-932 Unknown Unknown   V35T, E36A, T39E, S48T, D121H, K122E, D123S, I142IV, K173AT, D177E, I178L, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, V292I, I293V, E297EA  
s03-933 s03-933 Unknown Unknown   V35T, E36A, T39E, E40D, K122E, D123N, A158S, K173A, Q174K, D177E, I178M, T200E, E204D, Q207K, L210E, R211RK, V245Q, A272P, T286TA, E291D, V292I, I293V, V317A  
s03-934 s03-934 Unknown Unknown   K20R, V35T, T39K, E40D, V60I, K104R, K122E, D123G, E169D, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, E248D, D250E, S251I, A272P, K275KQ, V276I, Q278H, L279I, T286A, E291D, V292I, I293V, P294S, E297T, L301M, V317A, P321S, D324E  
s03-935 s03-935 Unknown Unknown   V35T, T39A, K102Q, I135V, S162A, K173A, Q174K, D177E, I178V, T200A, Q207E, V245Q, E248N, K281R, T286A, E291D, V292I, I293V, P294T, S322T, D324DE  
s03-936 s03-936 Unknown Unknown   V35T, E36A, T39D, S48T, V60I, D121HY, K122E, K166R, K173A, Q174QH, D177E, T200A, Q207DN, L210LF, R211K, V245Q, A272P, K277R, L283LI, A288AS, E291D, V292I, I293V, P294AT, K311KR, V317VA  
s03-937 s03-937 Unknown Unknown   E6D, K11T, K20R, T27P, K32I, V35T, T39K, K122KE, D123S, Y144F, S162D, K173I, Q174K, Q197H, T200I, Q207A, R211S, K238R, V241I, V245E, K275KR, T286A, E291D, V292I, I293V, P294T, E312DN H198T, R199G 
s03-938 s03-938 Unknown Unknown  P225PH V35T, E36D, I135V, S162A, E169G, K173T, Q174K, T200A, Q207E, F214L, P243T, V245Q, V276I, T286A, E291D, V292I, I293V, P294T, S322T P226PR, N306H 
s03-939 s03-939 Unknown Unknown   V35T, V60I, K64KR, D121H, K122E, I135V, S162A, K173AT, Q174QK, D177E, T200A, Q207E, R211K, V245Q, K281KR, T286A, E291D, V292I, I293V, P294T, S322A  
s03-942 s03-942 Unknown Unknown   M16ML, V35T, E36A, T39D, S48T, K122E, D123NS, K173AT, D177G, T200A, I202V, Q207E, V245Q, K249Q, D250DN, A272P, T286TA, E291D, V292I, I293V, P294T, K311R  
s03-943 s03-943 Unknown Unknown   V35T, E36D, K49R, V60I, K122E, D123T, I135T, K173S, Q174K, D177E, I178IM, T200TA, Q207A, R211S, V245Q, E248D, D250E, K281KR, T286A, E291D, V292I, I293V, P294PQ, E312NT H221HD 
s55-1000 s55-1000 Unknown Unknown M184V  V35KT, E36A, T39E, K122E, D123GS, A158S, K166KR, K173AT, Q174NS, D177E, T200A, Q207E, V245Q, D250T, A272P, K277R, E291D, V292I, I293V  
s55-1002 s55-1002 Unknown Unknown D67N, K70R, M184I, T215Y, K219E V179D, M230L V35T, T39A, K102KR, K103R, D123E, I135L, S162C, K173T, Q174R, I195L, T200A, Q207A, R211K, V245Q, E248N, A272P, L283LI, V292I, I293V, P294T, E297A, A304E, V317A, D324E A158AV 
s55-1003 s55-1003 Unknown Unknown M41L, M184V, T215F A98AG V35T, E36D, I135V, S162A, K173T, D177E, I178V, T200A, E203EK, Q207E, V276VAIT, T286V, E291D, V292I, I293V, P294T, S322T  
s55-1004 s55-1004 Unknown Unknown V75VL K103KN, Y181YC E6D, K11T, K20R, V35T, T39K, K43E, K122E, D123S, S162A, K173IT, Q174K, D177E, I178IM, T200I, I202IV, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, P294T, L310I, E312N  
Smn77 Smn77 Unknown Unknown  K103N E28EA, V35T, I50V, V60I, W88C, D121H, K122E, D123S, I135V, S162SACG, Q174N, D177E, T200A, Q207E, V245Q, E248D, A272S, K277R, T286A, E291D, V292I, I293V, E297T  
SNT53 SNT53 Unknown Unknown   K32KE, V35T, T39TA, E40ED, V106I, I135IV, A158S, I159IV, S162A, K173T, Q174KR, D177DE, T200TA, Q207E, R211RK, Q242QH, V245Q, K263KE, K277KR, Q278QR, R284RK, T286A, E291ED, V292VI, I293V, S322ST N175ND, N265NS, S268ST, K281KN, L283LV 
SSA75 SSA75 Unknown Unknown   V35T, E36A, T39E, S48T, K104E, K122E, D123S, K166R, K173A, Q174QK, D177E, T200A, E203K, Q207E, V245HQ, D250E, A272P, K277R, T286A, E291D, V292I, I293V, P294T  
Ssi73 Ssi73 Unknown Unknown M184V  V35T, K122E, T139K, S162C, E169D, K173T, Q174K, T200A, Q207D, R211K, V245Q, E248D, A272P, L283I, T286A, E291D, V292I, I293V, E297A  
Tch74 Tch74 Unknown Unknown   I5V, K11IT, V35T, T39K, D121Y, K122E, D123G, I135T, S162C, K173T, Q174K, D177E, G196E, Q207A, R211S, V245Q, E248D, D250Q, A272S, T286A, I293V, E312D  
Yan74 Yan74 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, I178IM, T200A, Q207A, R211S, K238KR, V245E, V276VI, T286A, E291D, V292I, I293V, E312T  
Zng77 Zng77 Unknown Unknown   V10I, V35K, V60I, I135V, E138A, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245L, E248D, K281R, T286A, E291D, V292I, I293V, P294T