<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kotaki (2013)
Title Detection of drug resistance-associated mutations in human immunodeficiency virus type 1 integrase derived from drug-naive individuals in Surabaya, Indonesia.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 43
NumPts 43
Subtype CRF01_AE, B

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
IDU1 IDU1 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IDU10 IDU10 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, M154I, D167E, V201I, L234I, S283G  
IDU11 IDU11 None    K14R, A21T, V31I, V32I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IDU12 IDU12 None    E11D, A21T, V31I, S39N, I72V, L74I, T112V, I113V, S119T, T125A, V126M, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
IDU13 IDU13 None    K7R, K14R, A21T, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IDU14 IDU14 None    E11D, A21T, V31I, S39N, D41N, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, D253G, S283G  
IDU15 IDU15 None    K14R, A21T, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IDU17 IDU17 None    E11D, A21T, V31I, S39N, M50I, I72V, L74I, E96D, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IDU18 IDU18 None    E11D, A21T, V31I, S39N, M50I, I72V, L74I, E96D, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G G106R 
IDU2 IDU2 None    S17C, H51Q, T124S, T125A, I135V, V201I, I203M, S230N T115K 
IDU3 IDU3 None    E11D, K14R, A21T, V31I, L101I, K111R, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IDU4 IDU4 None    E11D, K14R, A21T, V31I, I72V, L74I, I84V, T112V, T125A, G134N, I135V, K136R, M154I, V165I, D167E, V201I, L234I, S283G Q95T 
IDU5 IDU5 None    S17C, T124S, T125A, I135V, V201I, I203M, S230N E48K 
IDU7 IDU7 None   V151I K14R, V31I, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, K240R, S283G  
IDU8 IDU8 None    E11D, A21T, V31I, S39N, M50I, I72V, L74I, E96D, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G S195I, R199I 
IDU9 IDU9 None   E92N S24G, V31I, A38T, S39ST, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G H16D 
PJ105 PJ105 None   L74M K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
PJ109 PJ109 None    E11D, K14R, A21T, A23V, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
PJ117 PJ117 None    V31I, T112V, T124A, T125A, G134N, I135V, D167E, V201I, L234I, D279G, S283G  
PJ119 PJ119 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
PJ121 PJ121 None    K14R, V31I, S39N, L45T, L101I, T112V, T124A, T125A, G134D, I135V, K136R, D167E, V201I, K215N, N222K, L234I, K240R, S283G  
PJ22 PJ22 None  E138K  E11D, K14R, A21T, S39N, L45I, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234V, S283G  
PJ28 PJ28 None    E11D, A21T, S39N, D41N, M50I, I72V, T112V, T124A, T125A, G134N, I135V, K136H, D167E, V201I, L234I, S283G  
PJ37 PJ37 None    K14R, A21T, V31I, S39SN, I72V, T112V, T124A, T125A, G134N, K136Q, D167E, V201I, D232E, L234I, S283G  
PJ39 PJ39 None    K14R, V31I, I72V, T112V, T124A, T125A, G134N, K136Q, D167E, V201I, D232E, L234I, S283G  
PJ68 PJ68 None    K14R, A21T, V32I, I72V, Q95H, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G A38P 
PJ81 PJ81 None    E11D, A21T, V31I, S39N, M50I, Y83F, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283D  
PJ90 PJ90 None    E11D, A21T, V31I, S39N, M50I, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
SM11 SM11 None    V31I, I72V, Q95H, T112V, I113V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283D  
SM18 SM18 None    K14R, A21T, V31I, T112V, T125A, G134N, I135V, I161V, V201I, L234I, S283G  
SM2 SM2 None    E11D, A21T, V31I, M50I, Q95N, L101I, T112V, T124A, T125A, G134N, I135V, K136N, D167E, V201I, I203M, L234I  
SM26 SM26 None    K14R, A21T, V31I, S39N, I72V, Q95H, T112V, T124A, T125A, G134D, I135V, D167E, V201I, L234I, S283G  
SM35 SM35 None    K14R, A21T, A23V, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G G106R 
SM44 SM44 None    E11D, K14R, A21T, V32I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
SM51 SM51 None    E11D, A21T, V31I, S39N, M50I, I72V, L74I, E96D, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
SM56 SM56 None    E11D, K14R, A21T, V31I, S39Q, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, I208M, L234I, S283G  
SM65 SM65 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, K211Q, L234I, S283G  
UA14 UA14 None    E11D, S17C, I84M, A91T, T93S, L101I, T124S, V165I, V201I, S230N, R284G  
UA15 UA15 None    K7R, K14R, A21T, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
UA2 UA2 None    V32I, D41N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, V201I, L234I, S283G  
UA5 UA5 None    K7R, K14R, A21T, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, K173R, V201I, L234I, S283G  
UA6 UA6 None    E11D, K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, L234I, S283G  
UA8 UA8 None    K14R, A21T, V31I, Y99F, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G