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Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Wilantho A (2011)
Title HIV-1 integrase isolated from infected patients in Thailand.
Citation GenBank Submission
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 167
NumPts 167
Subtype CRF01_AE, B, C, A


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Page 1   from Isolate 1 to Isolate 100 from Total 167 Clinical IN Isolates

SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
1006360 1006360 None    E11D, K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
421377 421377 None    S24N, D25E, V31I, S39C, I60M, I72V, I84M, F100Y, L101I, T112V, T125A, D167E, K173KR, K188R, V201I, I203M, T206S, K215N, T218L, L234I, I268IL, R269K, D278A S283G 
500187 500187 None    K14R, A21T, A23V, V31I, S39N, I72V, Q95H, T112V, T124A, T125A, V126VM, G134N, I135V, K136R, V165I, V201I, L234I, D253E, D256E S283G 
500188 500188 None    K14R, A21T, V31I, S39N, I72V, Y83X, G106A, T112V, T124N, T125A, G134N, I135V, K160Q, Q164K, D167E, V201I, L234I S283G 
502925 502925 None    K14R, A21T, A23AV, I72V, L101I, T112V, T124S, T125A, G134N, I135V, K136T, D167E, V201I, L234I S283G 
508836 508836 None    S17N, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, V165I, D167E, V201I, E212EQ, L234I S283G 
510696 510696 None    K14R, A21AT, V31I, I72V, G106A, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K215N, L234I  
511282 511282 None    K14R, A21T, I72V, Q95H, T112V, T124A, T125A, G134N, I135V, K136R, E157Q, K160T, D167E, V201I, L234I S283G, R284G 
514016 514016 None    K14R, A21T, M22MI, V31I, T112V, T124A, T125A, V126L, G134N, I135V, K188KR, I191IM, V201I, N222K, L234V S283G, R284G 
514628 514628 None    K14R, A21T, M22I, A23V, S39N, L45V, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, R187K, K188R, V201I, L234I S283G 
514638 514638 None    S17C, L28LI, L45V, A91T, S119R, T124N, T125S, V165I, K211R, N222H, A265V  
514641 514641 None    K14R, A21AT, M22L, S24SN, V31VI, S39N, I60M, I72V, A98G, T112V, T125A, V126F, G134N, I135V, K136QR, V165VI, D167E, V201I, S230SN, L234I T124DN, S283G 
514643 514643 None    K14R, A21T, V31I, L45Q, I72V, T112V, T124A, T125A, V126IM, G134N, I135V, K136R, V165I, D167E, V201I, L234I S283G 
514645 514645 None    E11D, K14KR, A21T, A23AV, V31I, S39N, L45LV, I72V, T112V, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
514650 514650 None    K14R, A21T, V31VI, S39N, I72V, T112V, T124A, T125A, K127KR, G134N, I135V, K136Q, D167E, V201I, L234I, V260I S283G 
514653 514653 None    E11D, K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
514655 514655 None    K7KR, E11D, A21T, I72IV, T125A, I135V, V201I, K215N, S230SN D279GS, S283G, R284G 
514656 514656 None    A21AT, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I S283G 
521315 521315 None    K14R, A21T, S39N, L45Q, I72V, Q95H, T112V, T125A, G134N, I135V, K136R, V201I, L234I S283G 
522995 522995 None    K14R, V31I, V32I, S57SG, I72IV, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, T206S, K215N, L234I S283G 
522996 522996 None    K7KR, K14R, L28I, P30H, I60V, I72V, T112V, T124A, T125A, V126M, G134N, I135V, K136R, V165I, D167E, V201I, L234I S283G 
522998 522998 None    K14R, A21T, S39N, I72V, K111R, T112V, T124A, T125A, G134N, I135V, D167E, V201I, L234I S283G 
523020 523020 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, N144X, V165I, D167E, V201I, K215N, L234I S283G 
524787 524787 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, V126VIM, G134N, I135V, K136R, V150VA, V165I, D167E, V201I, L234I S283G 
600332 600332 None   E138D K14R, A21T, V31I, S39N, I72V, Q95H, T112V, T125A, G134N, K136Q, D167E, V201I, Q216N, L234I S283G 
600343 600343 None    E11D, K14R, A21T, V31VI, I72V, T112V, T124A, T125A, G134N, I135V, K136QR, V165I, D167E, V201I, T218S, L234I S283G 
600344 600344 None    E11D, K14KR, A21T, V31I, S39SN, I72V, T112V, T125A, G134N, I135V, K136Q, G163GV, D167DE, V201I, L234I S283G 
602512 602512 None    K14R, A21T, V31I, S39SN, I72V, T112V, T124A, T125A, G134N, I135V, K136HQ, I141IV, D167E, V201I, I208M, I220L, L234I  
607859 607859 None    K14R, A21T, A23V, V31I, S39N, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
610640 610640 None    K14R, A21T, A23V, V31I, S39N, L101V, T112V, T124A, T125A, I135V, K136R, D167DE, H171HQ, V201VI, I203M, K215KN, I220IL, R224RW, L234I  
612240 612240 None    E11D, K14R, A21T, V31I, S57SG, I72V, T112V, N117X, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I S283G 
623328 623328 None    K14R, V31VI, V32VI, I72V, T112V, T124A, T125A, V126L, G134N, I135V, K136R, G163A, D167E, V201I, I203IM, L234I, D256E S283G 
623329 623329 None    K14R, S17SN, I72V, T112V, T124A, T125A, V126M, G134N, I135V, K136R, K160T, D167E, V201I, L234I, D253DE, D256E S283G 
623330 623330 None    K14R, A21T, V32I, S39SN, L45Q, I72V, T112V, T125A, G134N, K136Q, D167E, V201I, K211R, T218I, L234I S283G, D288N 
626542 626542 None    R20K, V31I, I72V, P90PS, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167DE, V201I, I208L, L234I S283G 
700213 700213 None    K14R, A21T, A23V, V31VI, S39SN, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
704575 704575 None    E11D, K14R, A21AT, S24N, V31I, S39SN, L101I, T112V, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
707881 707881 None    K14R, A21T, A23V, V31I, S39N, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
711172 711172 None    K14R, V31I, I60L, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, D167E, S195T, V201I, K215N, L234I S283G 
711174 711174 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, Q216X, I220L, L234I S283G 
711206 711206 None    S17C, L28LI, L45V, A91T, S119R, T124N, T125S, V165I, K211R, N222H, A265V  
711209 711209 None    K7R, K14R, V31I, I72V, K111Q, T112V, T124A, T125A, V126VIM, G134N, I135V, K136R, E157ED, D167DE, V201I, L234I S283G 
711217 711217 None    V31VI, V88I, A91T, L101I, S119R, T124N, T125S, G163E, K211R, K215KN L158LF 
711218 711218 None    E11D, K14KR, A21T, A23AV, V31I, S39N, L45LV, I72V, T112V, T125A, G134N, I135V, K136R, D167E, V201I, L234I N117NS, S283G 
714013 714013 None    E11D, A21T, V31I, S39N, I72V, T112V, T125A, V126M, G134N, I135V, K136R, V165I, D167E, V201I, K215Q, L234I S283G 
715567 715567 None    K7Q, E11D, A21T, V31I, T112V, T124A, T125A, G134N, I135V, D167E, V201I, L234I S283G 
718017 718017 None    S17N, L101I, T112I, I113V, T124N, T125A, I135V, G163D, S230N, D253E, D256E  
718019 718019 None    E11D, K14R, L28I, P30S, I72V, T112V, I113V, T124A, T125A, G134N, I135V, K136R, V201I, I203M, T206S, L234I, N254S, S255G S283G 
718021 718021 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, K215N, L234I S283G 
718023 718023 None    K14R, A21T, S39SN, L101I, T112V, T124N, T125A, G134N, I135V, K136Q, K160KR, I161T, D167E, R187K, V201I, L234I, D278N S283G 
804236 804236 None    E11D, K14R, A21T, V31I, S39N, L101I, T112I, T124A, T125A, A133AT, G134D, I135V, K136R, V165I, V201I, K215KR, L234I, D279G S283G 
811650 811650 None    K14R, A21T, I72V, T112V, T124A, T125A, V126VIM, G134N, I135V, K136R, D167E, V201I, L234I S283G 
811690 811690 None    E11D, K14R, A21T, V31I, M50I, I72V, T112V, T124N, T125A, G134N, I135V, K136R, D167E, K188R, V201I, L234V, D256E  
811691 811691 None    E11D, K14R, A21T, V31I, V32I, L101I, T112V, T124N, T125A, G134N, I135V, K136R, D167E, V201I, I203M, L234I S283G 
819190 819190 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G, R284G 
819199 819199 None    K14R, A21T, M22L, V37I, S39C, L45V, I72V, T112V, T124A, T125A, V126M, G134N, I135V, K136R, D167E, V201I, L234I S283G 
819220 819220 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, K215N, L234I S283G 
901273 901273 None   E138D K14R, A21T, V31VI, S39N, I72V, Q95H, T112V, T125A, G134N, K136Q, D167E, V201I, Q216N, L234I S283G 
901288 901288 None    S17SN, R20RK, G70E, L101I, K111R, T112X, S119R, T122P, T124N, T125S, V201I, K211R, S230N, A265AV T115TA, N117NS, M275MT 
901320 901320 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, T206S, L234I  
916776 916776 None    K14R, V31I, V32I, S57SG, I72IV, L101I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, T206S, K215N, L234I S283G 
916788 916788 None   T97TA K14R, A21T, V31I, S39N, I72V, E96D, T112V, T124A, T125A, V126L, G134N, I135V, K136R, D167E, V201I, L234I S283G 
916797 916797 None    K14R, S24N, V31I, I72IV, L101I, T112V, N117X, T124A, T125A, G134N, I135V, K136H, D167E, V201I, L234I S283G 
924194 924194 None    E11D, K14R, A21T, V31VI, I72V, T112V, T124A, T125A, G134N, I135V, K136QR, V165VI, D167E, V201I, T218S, L234I S283G 
chan11 chan11 None    K14R, A21T, S24SG, E35Q, S39N, L45LI, L63LV, I72V, L74I, E96D, T112V, I113V, T124N, T125A, G134N, K136R, K160N, D167E, V201I, L234I, D256E S283G 
SL002 SL002 None    K14R, A21T, S39H, L45V, I72V, T112V, I113V, T124A, T125A, G134N, K136H, G163V, D167E, V201I, L234I, D256E S283G 
SL005 SL005 None    E11X, K14R, V31I, I72V, T112V, T124N, T125A, G134D, I135V, K136R, D167E, V201I, L234I S283G 
SL007 SL007 None    S17SN, S119K, T124N, T125S, L234I  
SL012 SL012 None    K14R, A21T, A23V, D25E, V31I, S39N, L63V, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, L234I S283G 
SL013 SL013 None    K14R, A21T, A23AV, N27NH, V31VI, S39N, I72V, T112V, T124N, T125A, G134N, I135V, K136Q, D167E, V201I, K215N, I220IV, L234I S283SG 
SL0182 SL0182 None    S17N, V31VI, A91T, L101LI, I113IL, S119R, T124N, T125A, G163E, K211R, S255SN, D256E  
SL032 SL032 None    K14R, A21T, V31I, S39N, I72V, T112V, I113V, T124N, T125A, G134N, K136R, V165I, D167E, V201I, L234I S283G 
SL034 SL034 None    K7R, K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, D167E, V201I, L234I S283G 
SL055 SL055 None    E11D, S17C, M50MV, C56Y, S57N, A91T, L101I, K111R, S119R, T125A, G163D, K211R, L234I, D279G  
SL057 SL057 None   V151I E11D, K14KR, A21T, V31I, S39N, I72V, T112V, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
SL058 SL058 None    K14R, A21T, V31I, S39N, L45Q, I72V, T112V, T124A, T125A, G134N, I135V, K136QR, V165I, D167E, V201I, L234I S283G 
SL059 SL059 None    K14R, A21T, V31I, V32I, I72V, Q95QH, R107RG, T112V, T124A, T125A, G134N, I135V, K136R, V165I, V201I, L234I S283G 
SL060 SL060 None    E11D, K14R, A21T, V31I, M50MI, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, R269RK S283G 
SL062 SL062 None    E11D, A21T, A23V, N27H, I72IV, I84IV, L101I, T112V, T125A, A133P, G134N, I135V, D167E, V201I, K215N, L234I T115TA, N117NS, S283G 
SL065 SL065 None    E11D, K14R, A21T, V31I, M50L, I72IV, I84L, T112V, I113V, T125A, G134N, E157Q, K160Q, D167E, V201I, I203M, L234I, D256E N117NS, S283G 
SL070 SL070 None    I72V, L101I, T112V, T124A, T125A, G134N, I135V, K160N, D167E, R187K, V201I, K211KR, L234I S283G 
SL072 SL072 None    K14R, A21T, V31I, S39SN, I72V, T112V, T124A, T125A, G134N, I135V, K136R, K160R, D167E, V201I, K215KN, L234I S283G 
SL073 SL073 None   V151I K14R, V31I, I72V, I84IL, P90S, L101I, T122TI, T124TA, V201I, A205S, K211KR, D256E  
SL074 SL074 None    K14R, V32I, I72V, T112V, T124A, T125A, V126L, G134N, I135V, K136R, D167E, V201I, T206S, L234I S283G 
SL075 SL075 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, V126L, G134N, I135V, K136R, V165I, V201I, L234I S283G 
SL076 SL076 None    K14R, A21AT, V31I, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, T206TS, L234I S283G, R284RG, D286DN 
SL077 SL077 None    K14R, A21T, V31I, S39N, I72V, T112V, T124N, T125A, V126L, G134N, I135V, K136R, D167E, V201I, L234I Y226YH, S283G 
SL079 SL079 None    E11D, K14R, A21T, V31I, L63V, I72V, T112V, T124A, T125A, G134N, I135V, K136R, M154I, V165I, D167E, V201I, K215N, L234I S283G 
SL101 SL101 None    K14R, V32I, I72V, K111Q, T112V, T124A, T125A, V126M, K127R, G134N, I135V, K136R, V165I, V201I, K211R, L234I S283G 
SL102 SL102 None    K14R, A21T, V31I, S39N, I72IV, T112V, I113IV, T124H, T125A, G134N, K136Q, D167E, V201I, I203M, L234I S283G 
SL103 SL103 None    K14R, A21T, V31I, S39SN, I72V, L101I, T112IV, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I S283G 
SL106 SL106 None    K14R, A21T, S39N, L45Q, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
SL110 SL110 None    K14R, V31I, S39N, I72V, T112V, T124A, T125A, V126M, G134D, I135V, K136R, V165I, D167E, V201I, L234I S283G 
SL128 SL128 None    K14R, A21T, S39SN, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, T218S, L234I K266KT, S283G 
SL129 SL129 None    E11D, K14R, A21T, V32I, L45LV, S57SG, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K211KR, L234I S283G 
SL139 SL139 None    K14R, V31I, V32I, I72V, L101I, T112I, T124A, I135V, D167E, V201I, T206S, L234I S283G 
SL140 SL140 None    K14R, A21AT, V31I, I72V, G106GA, T112V, T124A, T125A, G134S, K136X, D167E, V201I, L234I S283G 
SL178 SL178 None    K14KR, V31VI, V32I, I72V, Y99F, L101I, T112V, T124A, T125A, G134N, I135V, K136N, V201I, L234I, D279DG  
SL179 SL179 None    E11D, S24SN, V31I, V32I, I72V, T112V, T125A, V126VL, K127R, G134N, I135V, K136QR, D167E, V201I, L234V S283G 
SL433 SL433 None    K14R, L28I, V31I, V32I, I72V, I89L, T112V, T125A, V126M, G134N, I135V, K136Q, V201I, K211R, L234I S283G