<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Jahanbakhsh (2012)
Title Prevalence of transmitted HIV drug resistance in Iran between 2010 and 2011.
Citation PLoS ONE
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 47
NumPts 47
Subtype A, CRF01_AE, B

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
KSH21 KSH21INT None    D6E, K14R, N27NH, V32I, Q44QH, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, V201I, S283G, R284RG D167EK 
KSH22 KSH22INT None    D6E, E10V, V31I, S39N, I60M, I72V, T112IV, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, D167E, V201I, D232DN, S283G  
KSH24 KSH24INT None    D6E, K14R, P30AS, S39C, I60M, I72V, T112A, I113V, T124A, T125A, V126F, K136Q, V201I, I203M, I220V, D232DN, L234I, S283G D167EK 
KSH25 KSH25INT None    D6DE, S17SN, M22MR, V31I, S39N, D41DN, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, V165VI, D167E, V201I, I203IM, S230N, S283SG, R284RG  
KSH26 KSH26INT None    E11D, R20K, V31I, I60M, I72V, T112V, I113V, T125A, V126F, G134S, K136Q, R187RK, I191IM, V201I, D232DN, S283G D167EK 
KSH28 KSH28INT None    K14R, A21T, S39N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, E157Q, K160Q, I191IM, V201I, K211R, D232DN, L234V, S283G, D288N A38G, D167EK 
KSH29 KSH29INT None    D6E, K14R, A21AT, M22MI, A23V, E35EQ, S39N, M50MI, I60M, I72IV, T112V, I113V, T124S, T125A, V126F, G134S, K136Q, V201I, I203M, I208IM, D232DN, L234LH, S283G D167EK 
KSH30 KSH30INT None    D6E, A23V, V31I, S39N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, V201I, D232DN, S283G D167EK, I182IF 
KSH31 KSH31INT None   V54VI D6E, K14R, V31I, V32VI, I60M, I72V, I84IM, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, V201I, R231K, A239AT, S283G D167EK 
SYZ27 SYZ27INT None    D6E, S17N, A23V, V31I, S39N, Q44H, M50V, I60M, I72V, T112I, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, V201I, I208M, D286DN D232DY 
SYZ32 SYZ32INT None    D6E, K14R, S39N, I60M, I72V, T112I, I113V, T124A, T125A, V126F, G134S, K136Q, V201I, I208M, Q216H, S230SN, D232DE, S283G I73IL, D167EK 
SYZ33 SYZ33INT None    D6E, K14R, V31VI, S39N, L45Q, I60M, I72V, L74LI, P90PS, I113V, T124A, T125A, V126F, G134S, K136Q, V201I, A205S, I208M, S283G, D286N D167EK, G189GE 
SYZ34 SYZ34INT None    D6E, K14R, V31I, S39N, I60M, I72V, T112I, I113V, T124A, T125A, G134N, K136Q, D167E, V201I, Q216H, S283G N144NY 
SYZ35 SYZ35INT None    D6E, K14R, V31I, V32I, S39N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, V201I, Q216HN, L234LI, S283G D167EK, N184NI 
SYZ36 SYZ36INT None    D6DE, K14R, S17SN, V31VI, V32I, S39N, I60M, I72V, I113V, S119P, T125A, V126F, G134S, I135V, K136Q, K173KR, V201I, K211R, D232DN, V249VI, S283G I141IF, D167EK 
SYZ37 SYZ37INT None   T97A D6E, K14R, V31I, S39N, I60M, I72V, L74V, T112I, I113V, T124A, T125A, V126F, G134S, K136Q, V201I, S283G N27NI, D167EK 
SYZ38 SYZ38INT None    D6E, K14R, V31I, S39N, I60M, I72V, I84IL, T112I, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, V201I, I203IM, I208IM, Q216H, D256DE, S283G  
SYZ40 SYZ40INT None   L74M D6E, K14R, S17N, V31I, E35Q, S39N, I60M, I72V, T112I, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, V201I, I203M, S283G N27NI 
THR01 THR01INT None  E138EK  D6DE, K14R, V31I, S39N, M50MI, I60M, I72IV, L74LV, T112V, I113V, T124A, T125A, V126F, G134GS, K136Q, D167E, V201I, I203IM, A205AS, S283G V88VM 
THR02 THR02INT None    K14R, E35Q, S39N, I60M, I72V, L74I, G106GA, K111R, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, I191IM, S195T, V201I, I203M, S283G, R284RG I141IF, D167EK 
THR03 THR03INT None    E11D, V31I, S39N, M50MI, I60M, I72V, G106A, T112I, I113V, T125A, V126F, G134S, K136Q, D167E, G193R, V201I, Q216H, S283G  
THR04 THR04INT None    K14R, V32I, D41N, L45LI, I60M, I72V, K111R, I113V, T124A, T125A, V126F, K136Q, D167E, V201I, K211KR, I268IL, S283G  
THR05 THR05INT None    S17N, E35Q, S39N, I72V, T112V, I113V, T124A, T125TA, K136Q, V201I, S283DG W61GR, D167*K, G237GE 
THR06 THR06INT None    D6E, K14R, S17N, E35Q, S39N, I72IV, I113V, T124A, T125A, K136Q, D167E, V201I, S283G, D286DG N27NI 
THR07 THR07INT None   L74LIMV D6E, K14R, R20RG, V31I, S39SN, I60M, K71KR, I72V, T112V, I113V, T124A, T125A, V126F, G134S, I135IV, K136Q, D167E, K173R, V201I, I203M, S283G I204IT 
THR08 THR08INT None    D6E, K14R, S17N, E35Q, S39N, I72V, T112TI, I113V, T124A, T125A, K136Q, D167DE, V201I, S283G  
THR09 THR09INT None    D6E, K14R, V32I, D41N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, K173R, V201I, I208L, K211R, S283G  
THR10 THR10INT None  R263RK  S17N, E35Q, S39N, I60L, I72V, T112V, I113V, T124A, T125A, V126F, G134S, I135IF, K136Q, D167E, L172F, V176L, V201I, Q216H, D232DN, A265AT, S283G A169D, H171P 
THR11 THR11INT None    K14R, E35Q, S39N, S57SN, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, V201I, D232DN, S255SN, S283G  
THR12 THR12INT None    D6E, K14R, V32I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, V201I, K211R, K215N, S283G, D286N  
THR13 THR13INT None    K14KR, E35Q, S39N, I60M, I72V, P90PS, T112V, I113V, T124A, T125A, V126VF, G134N, I135IV, K136Q, D167E, V201I, L234C, S283G  
THR14 THR14INT None    G4E, V31I, V32I, S39N, D41N, L45I, D55N, I60M, G70E, I72V, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, M154I, R166K, D167E, V201I, I203M, S283G E35K, E69K, F139T, H171HP, L242LF 
THR15 THR15INT None  R263RK  K14R, L28I, V31I, V32I, K34KR, S39N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134GS, K136Q, D167E, R187RK, V201I, I203M, N222K, R231RK, D232DN, K240R, V259VI, A265AT, S283G N144NY, H171HP 
THR17 THR17INT None    K14R, A21T, V31I, I60M, I72V, I84M, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, V201I, S283G D167EK 
THR18 THR18INT None    K14R, S17SN, E35Q, S39N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, I135IV, K136Q, V201I, S230N, S283G D167EK 
THR19 THR19INT None    K14R, E35Q, S39N, I60M, T112V, I113V, T124A, T125A, K136Q, E198Q, V201I, T206S, S230SN, A265AT, R269RK, S283DG D167EK 
THR20 THR20INT None    D6E, K14KR, V31I, I60M, I72V, T112I, I113V, T124A, T125A, V126F, G134S, K136Q, V201I, D232DN, A265AT, S283G D167EK 
THR41 THR41INT None    D6DE, S17SN, E35Q, S39N, L45IV, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, D167E, V201I, S283G N27NI 
THR42 THR42INT None    S17N, E35Q, S39N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, I135V, K136Q, V165VI, D167E, V201I, S230N, S283G  
THR43 THR43INT None    D6E, K14R, A21AS, V37I, Q44H, I60M, I72V, I113V, T124A, T125A, K136Q, D167E, V201I, Q216H, S283G, D286DN S39L 
THR44 THR44INT None    K14R, A21T, E35Q, S39N, I60M, T112V, I113V, T124A, T125A, V126F, G134NS, I135V, K136Q, D167E, K173R, V201I, S283G  
THR46 THR46INT None    D6E, S17N, L28I, V31I, S39C, I60V, I113IV, T124N, T125M, I203M, I220L  
THR47 THR47INT None    E11D, A21T, D25E, E35Q, S39N, I72V, T112V, I113V, S119P, T124A, V126M, K136Q, D167E, V201I, K211KE, T218TI, S283G  
THR48 THR48INT None    K14R, A21T, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K211R, L234I, S283G  
THR49 THR49INT None   E138ED D6E, K14KR, S17N, E35Q, S39N, I60M, I72V, I84IM, T112V, I113V, T124A, T125A, V126F, I135IV, K136Q, I141IV, V201I, S230N, S283G D167EK 
THR50 THR50INT None    K14R, A21T, E35Q, S39N, M50I, I60M, I72V, K111KR, T112AV, I113V, T124A, T125A, V126F, G134GDNS, K136Q, R187RK, G189GR, V201I, K211KR, D232DE, S283G D167EK 
THR51 THR51INT None    I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, K136HQ, R187RK, V201I, D232DE D167EK