Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kousiappa (2011)
Title Molecular characterization of HIV type 1 strains from newly diagnosed patients in Cyprus (2007-2009) recovers multiple clades including unique recombinant strains and lack of transmitted drug resistance.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 74
NumPts 74
Subtype B, A, C, CRF02_AG, F, B + CRF02_AG, CRF37_cpx

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
CY181 CY181 Unknown    V32I, L45I, S119T, T124A, K156N, L234V, D253E, D256E V31E, K34N, E35Y, V37Q 
CY182 CY182 Unknown    E11D, S17N, V31I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, K136Q, D167E, V201I, I208L, N222K, L234I, S283G  
CY184 CY184 Unknown    D6E, E11D, S17N, E35Q, T124N, V201I, K211Q, D232E, L234F, A265V  
CY185 CY185 Unknown    K7R, E11D, A21T, A23V, V31I, L101I, T112V, T122I, T124A, T125A, G134N, K136T, V201I, L234I, S283G  
CY187 CY187 Unknown    D25E, I72V, F100Y, L101I, T112V, S119P, T122I, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A, S283G  
CY188 CY188 Unknown    E11D, S24N, I72V, L101I, T112A, S119P, T122I, K240R, V281M  
CY189 CY189 Unknown    S17N, A23V, L28I, P30A, I84M, T124A, T125A, G163T, V201I, T206S, K215S, D256E D64H 
CY190 CY190 Unknown    E11D, S24N, V31I, L45V, I72V, T112A, S119P, T124N, M154L, K211R  
CY191 CY191 Unknown    E11D, K14R, V31I, T124S, T125A, I135V, K136Q, G189R, V201I, I220L, Y227F, L234V, S255N, R284G, D288N A80P 
CY192 CY192 Unknown    K7R, V31I, I72V, T112V, T124A, T125A, V126M, G134D, I135V, D167E, V201I, T206S, L234I, S283G  
CY194 CY194 Unknown    E11D, S24N, V31I, L45V, I72V, T112A, S119P, T124N, M154L, A196T, V201I, K211R  
CY195 CY195 Unknown    S39C, T112I, T124N, T125V, V201I  
CY196 CY196 Unknown    E11D, K14R, A21T, S24G, S39C, I60M, I72V, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, V201I, L234I, S283G  
CY197 CY197 Unknown    D6E, A23V, K156N, R187K, V201I, I204V, I208L  
CY198 CY198 Unknown    E11D, S24G, D25E, M50I, G70E, L101I, S119R, T124N, V201I, I204V, I208L  
CY199 CY199 Unknown    D6N, E10D, E11Q, I72V, S119G, T122I, T124N, G163E, T218S, L234I, A265V  
CY200 CY200 Unknown    K14R, V31I, M50L, I72V, L74I, T124A, V201I, T206S, S283G, D286N L28P 
CY201 CY201 Unknown    D6H, E11D, V31I, L45Q, L101I, I113V, S119P, F181L, T218I, L234I, D256E Q95E 
CY202 CY202 Unknown    S17N, S39C, K71Q, P90S, E96N, L101I, T124A, T125A, V165I, K211R, I220L, Y227F, L234I, I268L, R269K, D270N  
CY203 CY203 Unknown   Q95K D6H, E11Q, K14R, R20K, D25E, V32I, L63I, L74I, A91E, F100Y, L101I, T112V, S119P, T125A, K136Q, V201I, T218S, I220V, N222K, L234V, S283G, R284G S24I 
CY204 CY204 Unknown  N155S E92D E11Q, N18S, V32I, T124A, V150I, L158F, K160N, H171R, V176I, M178V, I182V, H183P, K219N, N222K, D232E W132R, V180P, K186R 
CY205 CY205 Unknown    D25E, V31I, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, T218I, L234I, D278A, S283G P29A 
CY206 CY206 Unknown    K14R, V31I, S39C, Y99L, L101I, T112V, S119T, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, S283G  
CY207 CY207 Unknown    E11D, R20K, V31I, I60M, I72V, L74I, T112V, I113V, S119T, T124A, T125A, V126F, G134S, K136Q, V201I, L234I, S283G  
CY208 CY208 Unknown    K14R, A21T, S39N, D41N, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, D167E, V201I, K211R, T218I, L234I, S283G  
CY209 CY209 Unknown   T66P Q9P, S39N, D41N, S57R, I60M, I72V, T112V, I113V, T122I, T124A, T125A, V126F, G134N, I135V, K136Q, D167E, H183P, V201I, K211R, T218I, L234I, S283G H16L, A21G, N117H, N144T, K188T 
CY212 CY212 Unknown    E11D, K14R, S17T, V37I, M50I, I72V, A91T, L101I, S119G, T122I, T124A, T125A, M154I, V165I, V201I, T218L, Q221T, N222T, F223Y, R224W, D229G Q216A, I217R, K219V, V225G, Y226L, Y227H, R228T, S230E 
CY213 CY213 Unknown    D3E, E11D, R20K, V31I, I72V, L74I, K111I, T112V, I113V, S119P, T124S, T125A, V126I, G134D, K136Q, H183L, V201I, L234I, S255N D64Y, E85Q, D167K 
CY214 CY214 Unknown    K14R, V31I, L101I, I135V, K156N, V201I, R231K, K240R, I251L, D256E  
CY216 CY216 Unknown    I72V, G163Q, K215N A248S 
CY217 CY217 Unknown    K14R, L101I, T112V, I113V, T124A, T125A, G134D, E157Q, I191M, V201I, T206S, L234I, S283G, D286E, D288N  
CY218 CY218 Unknown    E11D, K14R, V31I, S39C, M50I, I72V, T112V, I113V, T124G, T125A, K136Q, D167E, V201I, Q216H, S283G  
CY219 CY219 Unknown    E11A, D25E, V31I, I84M, L101I, T112V, T124A, T125A, K136Q, V201I, K215N, L234I, R269K, D278A, S283G  
CY220 CY220 Unknown    S17N, S39C, L45I, M50I, I72V, L101T, T112V, T124N, T125A, K156N, E198D, V201I, R224W, D256Y, D286N K219I 
CY221 CY221 Unknown    D6H, E11Q, V31I, I72V, I84V, P90Q, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, R269K, D278A, S283G, D288N P30L, A33G, K34E 
CY222 CY222 Unknown   Q95K, G140E V32I, K42R, G70E, L101I, T112I, T124G, T125A, K136Q, M154I, E157K, R166K, V201I, L234I, D256E, V260I, S283G E35K, E152K 
CY223 CY223 Unknown   T97A S17N, V31I, I60V, I72V, T112V, T124S, T125A, V126L, G134D, I135V, V201I, E212Q, T218S, L234I, D256E, S283G  
CY224 CY224 Unknown    K7Q, E11D, V32I, L45V, I84V, L101I, T112I, I113V, S119P, T122I, T124A, T125A, K211Q, N254R, S255G, S283G, D286N  
CY225 CY225 Unknown    S17N, L28I, S39C, I84M, T124A, V201I, D232E  
CY226 CY226 Unknown    S119P, T124N, V201I, T206S, I220F  
CY227 CY227 Unknown    K14R, S24D, D25E, N27D, L45V, M50R, I72V, L101I, T112V, I113V, T124A, T125A, I135V, K136Q, V201I, K211R, T218I, L234I, A265V, R269K, D278A, S283G  
CY228 CY228 Unknown    K14R, S24D, D25E, L28I, P30A, S39C, M50I, I72V, L101I, T112V, I113V, T124A, T125A, K136Q, F181L, V201I, T218I, L234I, D278A, S283G  
CY229 CY229 Unknown    S17N, I60L, T122I, T124A, T125A, V201I, R284G  
CY230 CY230 Unknown    K14R, V31I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, D167E, V201I, L234I, D256E, S283G  
CY231 CY231 Unknown    D3E, E11D, R20K, A21T, V31I, I72V, L74I, T112V, I113V, S119P, T124S, T125A, G134D, K136Q, D167E, V201I, L234I, S255N, S283N  
CY232 CY232 Unknown   L68V S17N, I72V, I113V, T124N, T125V, G163E, T210I, K211R, D256E  
CY235 CY235 Unknown    E11D, A21T, D41N, G106A, T112V, I113V, S119T, T124A, T125A, G134D, K136Q, D167E, V201I, T218I, L234I, S283G  
CY236 CY236 Unknown    E11D, A21T, V32I, D41N, I60M, G106A, T112V, I113V, S119P, T124A, T125A, G134D, K136Q, D167E, V201I, A205S, T218I, L234I, S283G  
CY237 CY237 Unknown    V31I, M50I, L101I, T206S, K211R, K219N, D256E, D279G  
CY238 CY238 Unknown    E10G, N27H, Q95S, L101I, T112I, T218S, I220L, Y227F, L234I, D256E R20E, M22V 
CY240 CY240 Unknown   G163R S24N, L28I, L101I, K111T, T112V, S119G, T122I, T124N, T125A, G134N, I135V, E157Q, V201I, T206S, I208L, L234I, S283G E11H 
CY241 CY241 Unknown    D6H, E10D, P30S, V31L, T124N, T125A, V126M, T206S, D232E, L234H, D256E G4R, E35D, A38P, L242V 
CY242 CY242 Unknown   V151I R20K, V31I, M50I, I72V, V77A, K103R, T124N, T125A, L172I, V201I, D256E  
CY243 CY243 Unknown    K14R, V31I, V32I, D41N, I60V, I72V, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, F181Y, V201I, I208L, T218I, L234I, S283G  
CY244 CY244 Unknown    E10D, L101I, T122I, T124A, S230N, A265V  
CY246 CY246 Unknown    E10D, E11Q, I72V, G163Q, K215N, S255N A248S 
CY247 CY247 Unknown    K14R, V31I, S39R, L74I, A91E, L101I, T112I, S119R, T124A, T125A, G134N, I135V, K136T, V201I, T206S, K211R, T218I, L234I, S283G  
CY250 CY250 Unknown    D6E, E10D, V31I, L101I, K111T, T112A, S119P, T124N, I208M, S283G  
CY251 CY251 Unknown    K14R, S17N, S24D, L28I, S39C, T124A  
CY252 CY252 Unknown   T97A K14R, V31I, A91E, L101I, T112I, S119R, T124S, T125A, G134N, I135V, K136T, E157Q, V201I, T206S, Q216H, L234I, I268L, E287D  
CY253 CY253 Unknown    S17N, I72V, I113V, T125A, K156N, V201I, I208L, D256E  
CY254 CY254 Unknown    E11D, A21T, S24G, D25E, S39C, L45Q, L101I, S119A, T122I, T124N, T125A, K211R, N254K A179S 
CY255 CY255 Unknown    V31I, I72V, L74I, I89L, T112V, I113V, S119P, T124N, T125A, G134N, K136Q, M154I, D167E, V201I, L234I, S255N  
CY256 CY256 Unknown   E92D E11D, K14R, S24G, V31I, S57N, I72V, A91T, L101I, T112I, T124A, T125A, V126L, G134N, I135V, K136T, V201I, A205S, T206S, N222H, L234I, R269K, S283G, D286E T93P, W132R, E152K 
CY257 CY257 Unknown    V31I, S39C, K71Q, I84M, S119R, T124A, K156N, H183P, K186*, R187E, V201I, D229E, D232E H51L 
CY258 CY258 Unknown   E138D S17N, A23V, L28I, P30A, A38S, I72V, L74I, I89L, T124A, V201I, T218S, D253E, D256E, S283G  
CY259 CY259 Unknown    K14R, V31I, S39N, G106A, T112V, T124A, T125A, G134D, K136Q, V201I, I208L, T218L, Q221H, N222K, L234I, S255N, S283G, R284G, D288N L45A 
CY260 CY260 Unknown    E11D, A23V, D25E, L45Q, M50I, L101I, T112V, T124A, K136Q, D167E, V201I, K211R, T218I, L234I, D270E, D278A, S283G  
CY262 CY262 Unknown    E11Q, K14R, A21T, I113V, D256E, V259I E10H, D64N 
CY263 CY263 Unknown    M50R, T112I, K156N, D232E D25N, E35K 
CY265 CY265 Unknown    E11D, S24N, L28I, L101I, K111T, T112V, S119G, T122I, T124N, T125A, G134N, I135V, K156N, E157Q, V201I, T206S, I208L, L234I, S283G  
CY266 CY266 Unknown    E11D, S24N, V31I, I72V, S119P, E157Q, K160Q, D167E, V201I, T206S, T218S, S230N, D253E, D256E, R284G  
CY267 CY267 Unknown    I72V, G163Q, K215N A248S 
CY268 CY268 Unknown    E11D, S24N, V31I, L45V, I72V, T93N, T112A, S119P, T124N, M154L, N254K