Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Luu (2012)
Title HIV type 1 coreceptor tropism, CCR5 genotype, and integrase inhibitor resistance profiles in Vietnam: Implications for the introduction of new antiretroviral regimens.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 54
NumPts 54
Subtype CRF01_AE

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
IVVI00024 IVVI00024 None    K14R, A21T, V31I, S39T, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI00034 IVVI00034 None    K7R, E13EG, K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136KR, M154I, V165I, D167E, V201I, L234I, S283G  
IVVI00100 IVVI00100 None    E11D, A21T, V31VI, S39N, I72V, P90S, Q95S, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
IVVI00112 IVVI00112 None    V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
IVVI00119 IVVI00119 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI00127 IVVI00127 None    E11D, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, E157EQ, D167E, V201I, L234I, S283G  
IVVI00128 IVVI00128 None    K14R, A21T, V31I, S39N, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI00130 IVVI00130 None    A21T, V31I, S39SN, I72V, T112V, T124TA, T125A, V126FL, K127KR, G134N, I135IV, K136R, V165I, D167E, V201I, I217V, L234I, V249VI, S283G  
IVVI00146 IVVI00146 None    K14R, A21T, A23AV, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI00157 IVVI00157 None    D6DN, E11D, K14R, A21T, V31I, S39N, I72IV, T112V, T125A, G134N, I135IV, K136R, M154MI, D167E, V201I, S230SN, L234I, S283G E35EK, C40CY, E48EK, G70GEKR, G149GE, G190GE 
IVVI00159 IVVI00159 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI00259 IVVI00259 None    E11D, A21T, V31I, I72V, K111T, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, I217V, L234V, S283G  
IVVI00287 IVVI00287 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI00297 IVVI00297 None    K14R, A21T, V31VI, S39N, L45Q, I72V, T112V, I113IV, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K211KR, L234I, S283G  
IVVI00312 IVVI00312 None    K14R, A21T, V31I, S39N, I72V, I84V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I  
IVVI00322 IVVI00322 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI01862 IVVI01862 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, Y194YH, V201I, L234I, S283G H171HP 
IVVI01895 IVVI01895 None    K14KR, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, K160R, D167E, V201I, L234I, S283G  
IVVI01927 IVVI01927 None    D6DE, K14KR, A21AT, V31I, S39N, I72V, T112V, T125A, V126VL, K127KR, G134N, I135V, K136QR, D167DE, V201I, L234I, N254NK, S283G T124HPQ, Q252Q* 
IVVI01928 IVVI01928 None    E11D, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
IVVI01932 IVVI01932 None    E11D, A21T, V31I, I72V, T112V, T125A, V126M, G134N, I135V, K136R, D167E, V201I, L234I, S283G, R284G  
IVVI01970 IVVI01970 None    K14R, A21T, V31I, S39N, I72V, T112IV, T124A, T125A, G134N, I135V, K136QR, D167E, V201I, L234I, N254ND, S283SG  
IVVI01979 IVVI01979 None    K14R, A21T, V31I, S39N, I72V, Q95H, T112V, T124A, T125A, G134N, I135V, K136Q, V201I, L234I, D279DG, S283G  
IVVI02003 IVVI02003 None    K14R, A21T, S24SG, V31I, S39N, I72V, T112V, T125A, K127R, G134N, I135V, K136R, K156R, K160KR, D167E, R187RK, G193GE, V201I, L234I, S283G  
IVVI02028 IVVI02028 None    A21AT, V31I, S39N, I72V, T112V, T125A, V126L, K127R, G134N, I135V, K136R, I182V, V201I, T218S, L234I, S283G  
IVVI02035 IVVI02035 None    K14R, A21T, V31I, S39N, I72IV, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI02063 IVVI02063 None    K14R, A21T, V31I, I72V, Q95H, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G A8AP 
IVVI02073 IVVI02073 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI02074 IVVI02074 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI02077 IVVI02077 None    K14KR, A21AT, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
IVVI02134 IVVI02134 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI03728 IVVI03728 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, K127R, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
IVVI03786 IVVI03786 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, I251V, S283G  
IVVI03801 IVVI03801 None    K14R, A21T, A23V, V31I, S39N, I72V, T112V, T124N, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI05273 IVVI05273 None    K14R, A21T, V31I, S39SG, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193D, S195C, V201I, L234I, S283G  
IVVI05296 IVVI05296 None    E11D, K14R, A21T, A23V, I72V, E96D, T112V, T124A, T125A, G134N, I135V, K136R, V201I, L234I  
IVVI05297 IVVI05297 None    K14R, A21T, V31I, S39N, I72V, Y99H, T112V, T124A, T125A, V126M, G134N, I135V, K136QR, V165I, D167E, V201I, L234I, S283G  
IVVI05393 IVVI05393 None    K14R, A21T, V31I, S39N, I72V, P90PS, T112IV, T124TA, T125A, V126M, K127R, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI05455 IVVI05455 None    K14R, A21T, A23V, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, T206S, Q216H, L234I, S283G  
IVVI05537 IVVI05537 None    K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234V, S283G  
IVVI05543 IVVI05543 None   L74IM K14R, A21T, V31VI, I72V, T112V, T124A, T125A, G134GDNS, I135V, K136KT, D167E, H171Y, K173R, V201I, K211KR, L234I, S283G  
IVVI05630 IVVI05630 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, V126L, G134N, K136R, D167E, V201I, L234I, S283G  
IVVI07005 IVVI07005 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI07090 IVVI07090 None    K14R, A21T, V31I, S39SN, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI07118 IVVI07118 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI07133 IVVI07133 None    K14R, A21T, V31I, S39N, I72IV, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167DE, V201I, L234I, S283G  
IVVI07187 IVVI07187 None   L74IM K14R, A21T, V31I, S39N, L63LIMV, I72V, V77VA, V79VA, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI07209 IVVI07209 None    E11ED, K14R, A21T, A23AT, V31I, S39N, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167DE, V201I, L234I, S283G F1FS 
IVVI07223 IVVI07223 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, K136R, V165I, D167E, V201I, L234I, S283G W108WG 
IVVI07272 IVVI07272 None    K14R, A21AT, V31I, S39N, T112V, T125A, V126L, K127R, G134N, I135V, K136R, V201I, L234I, S283G D25AV 
IVVI07324 IVVI07324 None    K14R, A21T, V31I, S39N, M50MV, I72V, Q95H, T112V, T124TA, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
IVVI07355 IVVI07355 None    K14R, A21T, A23V, S39N, I72V, T112V, I113V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G  
IVVI07390 IVVI07390 None    K14R, A21T, A23V, V31VI, S39N, L45Q, I72V, T112V, T124A, T125A, K127R, G134N, I135V, K136R, D167E, V201I, L234I, S283G A91AP, T93TP, T97TP, A105AP, T115TP, D116DA, S123ST, A128AP, A129AP 
IVVI07392 IVVI07392 None    E11ED, K14R, A21T, V31I, S39N, L45V, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S255SR, S283G