<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kim (2011)
Title Genetic variation of the HIV-1 integrase region in newly diagnosed anti-retroviral drug-naive patients with HIV/AIDS in Korea.
Citation Clin Microbiol Infect
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 75
NumPts 75
Subtype B, CRF01_AE, CRF02_AG


Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
p1 p1 None    D6E, E11D, K14R, L28I, V31I, V32I, V37I, I72V, L101I, T124N, I135V, I200L, V201I, I203M L241I, D286E 
p10 p10 None    E11D, S24N, V31I, I72V, I113V, G163E, V201I  
p11 p11 None    D6E, E11D, K14R, L28I, V31I, V32I, V37I, I72V, L101I, T124N, I135V, I200L, V201I, I203M L241I, D286E 
p12 p12 None    V31I, T124N, T125A  
p13 p13 None    D6E, S17N, V31I, I72V, T124N, A265V  
p14 p14 None    V31I, I113V, T124N  
p15 p15 None    E11D, L28I, V37I, S39R, S57N, E69K, I72V, L101I, T124N, I135V, V201I A8D, C40G 
p16 p16 None   V151I A21T, V31I, S119T, T124N, T125A, K215N, D232E  
p17 p17 None    Q9P, K14R, V31I, S119G, T122I, T124N, T125A, G163E, S230N, Q252H E287D 
p18 p18 None    E11D, V31I, V32I, I72V, L101I, I113V, T122I, T124N, T125A, G163E, A205T  
p19 p19 None   V151I E11D, A21T, D25E, V31I, S119P, T124N, T125A, I135V, V201I, K215N, D256E  
p2 p2 None    D3N, V31I, E69K, T124N, T125A, I135V, D256E G47E, Q285P 
p20 p20 None    E11D, L28I, V37I, S39C, I72V, L101I, T124N, I135V, V201I, I203M  
p21 p21 None    E11D, S24N, V31I, I72V, I113V, G163E, V201I, T218A  
p22 p22 None    K14R, A21T, M22L, A23V, V37I, S39N, L45V, T112V, T124A, T125A, G134N, I135V, K136R, V201I, T218L, L234I V225I, S283G 
p23 p23 None    D6E, S17N, V31I, I72V, T124N, A265V  
p24 p24 None    E10D, V31I, I72V, L101I, T122I, T124N, K156N, V165I, E198D, V201I, I204L, S255R, G272A D286N 
p25 p25 None    V31I, I72V, L101I, T122I, T124N, E157Q, R187K, D232N, S255N  
p26 p26 None    E11D, V31I, V32I, T124N, T125A, I135V, I161L, S230N, L234V, A265P L241I 
p27 p27 None    E11D, S24N, V31I, I72V, I113V, G163E, V201I  
p28 p28 None   V151I E11D, A21T, V31I, T124N, T125A, I135V, D256E  
p29 p29 None   V151I E11D, A21T, V31I, T124N, T125A, I135V, D256E  
p3 p3 None    V31I, K111R, T124N, T125A, V126L  
p30 p30 None    E10D, V31I, I72V, S119P, T124N, T125A, K211Q, S230N, A265V  
p31 p31 None    V31I, G193E, T218S, S230N, D256E D286N 
p32 p32 None    E11D, V32I, L101I, T124N, I162L, D167E, V201I, N222K  
p33 p33 None    D6E, S17N, T124N, T125A, E157Q, K160Q, E198D, V201I, A265V D288E 
p34 p34 None    E10D, V31I, L101I, T124N, T125A, K211Q  
p35 p35 None    S230N, R231K  
p36 p36 None    S230N, R231K  
p37 p37 None    E10D, V31I, L101I, T124N, T125V, G163E, D256E  
p38 p38 None    V31I, I113V, T124N, T125A, K136N, T206S, K215N  
p39 p39 None    E10D, S39C, L101I, I135V, E157Q, K160Q, V201I R284G 
p4 p4 None    E10D, V31I, L101I, T124N, T125V, G163E, D256E  
p40 p40 None    E11D, V31I, T124N, S195T, A265V, Y271F  
p41 p41 None   V151I E11D, A21T, V31I, T124N, T125A, I135V, D256E  
p42 p42 None    S24N, V31I, L45V, L101I, T124N, T125A, G163E  
p43 p43 None   V151I E11D, K14R, A21T, V31I, T124N, T125A, I135V, I203M  
p44 p44 None    S230N, R231K  
p45 p45 None    K14R, L28I, V31I, V32I, S57G, L101I, T112A, T124N  
p46 p46 None    S17N, V31I, L101I, S119G, T122I, T125A, G163E, H171Q, S255R  
p47 p47 None    S230N, R231K  
p48 p48 None    S230N, R231K  
p49 p49 None    E11D, V31I, V32I, V37I, L101I, T124N, T125A, I135V, V201I, D256E  
p5 p5 None    E11D, V31I, V32I, T124N, S195T, A265V  
p50 p50 None    S230N, R231K  
p51 p51 None    E11D, K14R, S24H, V32I, S39C, I72V, L101I, T112V, T124A, G134N, I135V, K136T, V201I, T206S, L234I, S255N S283G 
p52 p52 None   L74M T124A, G163E S283G 
p53 p53 None    V31I, L101I, I113V, T124N, A265V, R269K  
p54 p54 None    E11D, V31I, V37I, L101I, S119G, T122I, T124N, T125A, G163E, V201I, D256E  
p55 p55 None    V31I, V32I, L101I, T124N, A265V  
p56 p56 None    V32I, I113V, T124N  
p57 p57 None    K14R, A21T, M22L, A23V, V37I, S39N, L45V, T112V, T124A, T125A, G134N, I135V, K136R, V201I, T218L, L234I S283G 
p58 p58 None    S230N, R231K  
p59 p59 None    E11D, S17N, V31I, T124N, E157Q, V201I, A265V  
p6 p6 None    E11D, V31I, L101I, I113V, T124N, T125A, I135V, G163E, H171Y, V201I, N222K, R224S, E246K, V249I, D256E V225D, G245R 
p60 p60 None   V151I E11D, K14R, A21T, V31I, T124N, T125A, I135V, D256E  
p61 p61 None    E11D, V31I, V32I, T124N, I135V, S195T, S230N  
p62 p62 None    V31I, L101I, T122I, T124N, K211R, A265V  
p63 p63 None    D6E, E10D, V31M, D256E S283G 
p64 p64 None    D6E, S17N, V32I, T124N, A265V  
p65 p65 None    V31I, I72V, L101I, T122I, T124N, E157Q, R187K, S255N  
p66 p66 None    E10D, K14R, V31I, I72V, T124N, T125A  
p67 p67 None    R20K, V31I, V37I, M50L, L101I, I113V, T124N, I135V, I200L, V201I, I203M R284G 
p68 p68 None    K14R, V31I, S57G, T124N, T125A, I135V  
p69 p69 None    D6E, E10D, V31I, L101I, T112I, T124N, D232E, A265V  
p7 p7 None    D6E, E11D, V31I, V37I, L101I, S119G, T122I, T124N, T125A, G163E, V201I, I203M, D256E, D278E  
p70 p70 None    E11D, S39C, L101I, T124N, V150A, V201I, I208L, K240R  
p71 p71 None    D6E, E10D, V31I, I72V, I113V, S119G, T122I, T124N, D256E  
p72 p72 None    K14R, A21T, V32I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, L234I  
p73 p73 None    D6E, K14R, V31I, I113V, T124N, I162V, G163E, G193R, V201I  
p74 p74 None    E10D, V31I, L101I, T124N, T125V, G163E, D256E  
p75 p75 None    E11D, S24N, V31I, I72V, T124N, V201I  
p8 p8 None    S17N, V31I, I60M, I72V, L74I, I84M, T124S, T125A, G163E, A205T, G277C V281M 
p9 p9 None    E11D, K14R, A21T, V31I, V32I, I72V, T112V, T124A, T125A, G134S, I135V, D167E, V201I, L234I S283G