Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Rolland (2011)
Title Genetic impact of vaccination on breakthrough HIV-1 sequences from the STEP trial
Citation Nat Med
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 67
NumPts 67
Subtype B, CRF02_AG


Clinical PR Isolates

0006 consensus_0006 None    T12N, E35D, N37H, R41K, L63P  
0053 consensus_0053 None    R41K, K43R, L63P, V77I  
0062 consensus_0062 None    I13V, M36I, N37D, R41K, I64V, E65D, I72R  
0176 consensus_0176 None    I13V, K20R, M36I, N37D, I64V, I93L  
0223 consensus_0223 None    I15V, L63P, I72M  
0227 consensus_0227 None    T12A, E35D, N37NS, R41K, L63P, I93L  
0287 consensus_0287 None    K14R, L19I, E35D, M36I, N37D, L63P  
0309 consensus_0309 None    G16E, E35D, I62V, L63H  
0322 consensus_0322 None    T12S, K14R, I15V, E35D, M36V, D60E, Q61E, L63P  
0341 consensus_0341 None    I15V, L19I, E35D, N37S, L63Q  
0346 consensus_0346 None    T12V, I15V, N37S, R41K, L63P, I72V, I93L  
0364 consensus_0364 None    K14R, G17E, K45R, K55R, R57K, I62V, L63P, A71T  
0388 consensus_0388 None    E35D, M36I, R57K, L63P  
0491 consensus_0491 None    G17E, E35D, N37D, L63P, I93L  
0524 consensus_0524 None    L10V, T12P, K14R, I15V, R41K, K43R, L63T, A71T, I72T, V82I, I93L  
0525 consensus_0525 None    Q61E, I62V, L63S, I64L, I72T, V82I, I93L  
0572 consensus_0572 None    R41K, I62V, L63H, A71V, V77I, Q92H, I93L  
0648 consensus_0648 None    T12P, K14R, L63P, C67S  
0717 consensus_0717 None    L63P, V77I, I93L  
0762 consensus_0762 None    D60E, I64V, V77I, I93L  
0823 consensus_0823 None    I13V, N37C, L63P, V77VI, I93L  
0839 consensus_0839 None    E35D, R41K  
0841 consensus_0841 None    N37S, I62V, L63P, A71V, I72V, P79S, I93L  
0879 consensus_0879 None    G16E, E35D, I62V, L63H  
0897 consensus_0897 None    T12S, K20R, N37S, L63P, V77I  
0923 consensus_0923 None    K14R, E35D, N37D, L63P  
0938 consensus_0938 None    I15V, L63P, I93L  
0961 consensus_0961 None    I62V, L63P, I64L, V77I, I93L  
0965 consensus_0965 None    G40X, P44X, L63X, I64V, G68X, K70R  
1027 consensus_1027 None    L33V, I85V  
1046 consensus_1046 None    L63S, I72V, V77I  
1047 consensus_1047 None    Q61E, I62V, L63P, I64M, I72V, I93L  
1055 consensus_1055 None  I47V  T12S, I13V, K14R, L19V, N37S, L63P, I72V  
1115 consensus_1115 None    T12S, I13V, L19I, L63P  
1174 consensus_1174 None    L33V, N37E, P39Q, R57K, Q61E, I62V, L63P, A71V, I72E, I93L M36N 
1191 consensus_1191 None    L10V, E35D, M36I, R41K, R57K, L63P, A71T, I93L  
1211 consensus_1211 None    M36I, Q61E, I64V, H69Y  
1368 consensus_1368 None    I15V, Q18R, K20M, E35D, M36V, L63P, I93L  
1399 consensus_1399 None    N37T, L63S, I64L, I72V, V77I, I93L  
1400 consensus_1400 None    T12P, I15V, L19I, P39S, L63V, T91V, I93L  
1478 consensus_1478 None    E35D, M36I, R57K, L63P, I93L  
1500 consensus_1500 None    I13V, E35D, N37S, L63P  
1504 consensus_1504 None    I13V, R41K, L63H, I64V, H69Y, V77I  
1512 consensus_1512 None    N37D, L63H, V77I, I93L  
1518 consensus_1518 None    L10V, N37S, R41K, L63P, K70R, V77I, I93L  
1619 consensus_1619 None    G17E, Q18I, E35D, M36I, R41K, Q61E, I62V, L63T, I64V, E65D, I72T  
1799 consensus_1799 None    I13V, K14R, N37E, Q61E, L63Q, E65D, T74S, V77I, L89M  
1897 consensus_1897 None    N37S, I62V, L63P, I72V, V77I, I93L  
1926 consensus_1926 None    I15V, L19T, N37S, I62V, L63C, I93L  
2000 consensus_2000 None    L19Q, M36I, I64V, H69Y, K70E, I72V  
2008 consensus_2008 None    E35ED, R41K, L63P, E65ED, I93IL  
2136 consensus_2136 None    E35D, N37S, R41K, R57K, Q61E, L63P, A71T, I72V, I93L  
2241 consensus_2241 None    I13V, R41K, L63P, V77I  
2254 consensus_2254 None    L10I, T12V, I13V, I15V, Q18H, N37D, L63P, C67S  
2289 consensus_2289 None    I13V, E35D, M36I, R41K, L63A, I64L  
2305 consensus_2305 None    E35D, I62V, L63P, A71AT, I72E, I93L  
2349 consensus_2349 None    T4S, G16E, L19I, L63A, I72T, Q92K  
2437 consensus_2437 None    E35D, N37D, I62V, L63H, T74S, V77I, I93L  
2495 consensus_2495 None    I13V, R41K, L63P, V77I  
2586 consensus_2586 None    L10V, M36MI, D60E, I62V, L63T  
2622 consensus_2622 None    L33V, N37D, I62IV, L63P, P79S  
2649 consensus_2649 None    E35D, P39Q, R41K, L63P, A71T  
2667 consensus_2667 None    N37S, L63P, I64L  
2696 consensus_2696 None    I13A, G17E, K20I, E35D, M36I, R41K, H69K, I72V, L89M  
2717 consensus_2717 None   V11I L10I, Q61E, I62V, L63H, I64L, A71V, V77I, P79S, I93L  
2794 consensus_2794 None   V11I L10I, T12P, N37E, Q61E, I62V, L63A, I64L, V77I, I93L