<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author An (2012)
Title Reconstituting the epidemic history of HIV strain CRF01_AE among men who have sex with men (MSM) in Liaoning, northeastern China: Implications for the expanding epidemic among MSM in China
Citation J Virol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 39
NumPts 39
Subtype CRF01_AE, C, B


Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
08LNA001 08LNA001 None None   E6G, E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I309L, G335D, T338S, R356K, G359T, T377I, K390R, A400T, E404D, E432D, I434M, V435A, A437V, L452I, Q464K, D471E, Q480H, H483Y, L491S, S519N, K530R, A534S, A554S N137S 
08LNA002 08LNA002 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135T, K173M, Q174K, D177E, T200R, Q207A, R211S, F214L, K238R, V245D, V276I, T286A, E291D, I293V, K311R, E312T, I326V, I329V, G335D, M357K, G359S, K366R, K390R, K395R, A400T, E404D, E432D, N447S, R448K, D460N, R461K, D471E, Q480H, H483Y, L491P, K512R, L517I, S519N, Q524E, I526V, A534S, V552F, A554S  
08LNA003 08LNA003 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123N, S162C, K173R, Q174K, D177E, I178M, V179I, Q207A, R211S, K238R, V245E, K281R, T286A, E291D, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S, A554T  
08LNA004 08LNA004 None None   E6D, V35T, T39K, K43E, K122E, D123S, K173R, Q174K, D177E, T200I, Q207A, R211S, K238R, V245E, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, K390R, K395R, A400T, T403A, A408T, E432D, N447S, R448K, D460S, R461K, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554L  
09LNA005 09LNA005 None None   P4H, E6D, V8I, V35T, T39K, K43E, K122E, D123S, I135T, K173I, Q174K, D177E, Q207A, R211S, F214L, K238R, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, E432D, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA007 09LNA007 None None   E6D, V35T, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200V, Q207A, R211S, F214L, V245E, V276I, E291D, V292I, I293V, E312T, P321S, I326V, I329V, G335D, M357K, G359S, K366R, T369A, A371V, K390R, K395R, A400T, E404D, E432D, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, E514D, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA008 09LNA008 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123N, S162C, K173R, Q174K, D177E, I178M, V179I, Q207A, R211S, K238R, V245E, K281R, T286A, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S, A554T  
09LNA011 09LNA011 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123N, S162C, K173R, Q174K, D177E, I178M, V179I, Q207A, R211S, K238R, V245E, K281R, T286A, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S, A554T  
09LNA013 09LNA013 None None   E6D, K20R, E28K, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, T286A, E291D, V292I, I293V, I309L, E312T, I326V, I329V, G335D, P345Q, F346Y, M357K, G359S, K366R, T369A, A371V, A376S, K390R, K395R, A400T, T403A, E432D, N447S, D460N, Q464K, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554T  
09LNA014 09LNA014 None None   V35I, R83K, K122E, D123S, A158S, I195K, T200A, Q207E, R211K, E248D, K277R, A288S, E297K, S322T, G333E, Q334H, V365I, A376T, A400T, V435A, D460N, S468T, Q480K, S519N, I556V  
09LNA020 09LNA020 None None   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200R, E203D, Q207A, R211S, F214L, K238R, V245D, V276I, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, K431R, E432D, N447S, R448K, D460N, D471E, Q480H, L491P, K512R, L517I, S519N, Q524E, I526V, A534S, A554S, K558R  
09LNA025 09LNA025 None None   E6D, K11T, V35T, E36D, T39K, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, P345Q, M357K, G359S, K366R, T369A, A371V, K395R, A400T, E432D, N447S, D460N, D471E, Q480H, H483Y, L491P, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA040 09LNA040 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, A158S, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, P345Q, F346Y, M357K, G359S, K366R, K390R, A400T, E432D, N447S, R448K, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA041 09LNA041 None None   E6D, V35T, T39K, K43E, K122E, D123S, I135T, K173R, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, R358K, G359S, K366R, T369A, K390R, K395R, A400T, E432D, N447S, R448K, D460N, R461K, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA136 09LNA136 None None   E6D, V35T, T39L, K122E, D123S, I135T, I142V, K173I, Q174K, D177E, T200R, Q207A, R211S, F214L, K238R, Q242L, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, E432D, N447S, R448K, D460N, D471E, Q480H, H483Y, L491S, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA230 09LNA230 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135T, K173M, Q174K, D177E, T200R, I202V, E204Q, Q207A, R211S, F214L, K238R, V245D, K281R, T286A, E291D, V292I, I293V, E312T, S322A, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, E404D, E432D, N447S, R448K, D460N, R461K, D471E, Q480H, H483Y, L491P, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA336 09LNA336 None None   E6D, V35I, I135L, S162C, G196E, E248V, A272P, A288G, I293V, E297A, V317A, D324E, I326V, I329V, E344D, M357I, R358K, A360V, K390R, R463K, H483Y, L517V, K530R, K550R, I556V  
09LNA340 09LNA340 None None   E6D, K11T, V35T, T39K, K43E, K103R, D123N, S162C, K173R, Q174K, D177E, I178M, V179I, T200A, E203D, Q207A, R211S, K238R, V245E, K281R, T286A, I293V, E312T, V317T, I329V, G335D, M357K, G359S, K366R, K388R, K390R, A400T, T403M, E404D, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S  
09LNA353 09LNA353 None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, V245E, V276I, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, A360S, K366R, A371V, K390R, K395R, A400T, E432D, N447S, R448K, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
09LNA379 09LNA379 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R, V245E, A272P, T286A, A288T, E291D, V292I, I293V, P294T, E312T, I326V, I329L, M357K, G359S, A371V, T386I, K390R, A400I, T403M, E432D, N447S, D471E, Q480H, H483Y, K512R, L517V, Q524E, A534S, V548I, A554S  
09LNA423 09LNA423 None None   K122E, D123S, I135R, K173I, Q174K, D177E, V179I, T200I, I202V, Q207A, R211S, I244V, V245E, K281R, L282V, T286A, E291D, V292I, I293V, P294T, E312N, L325I, I326V, I329V, G335D, M357K, G359S, A371V, K390R, A400T, T403M, E432D, N447S, R448K, D460N, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, E529D, A534S, A554S  
09LNA425 09LNA425 None None   E6D, V35T, T39K, K43E, K122E, D123S, I135T, K173M, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, K281R, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, T369A, K395R, A400T, E432D, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, K530R, A534S, A554S  
09LNA439 09LNA439 None None   V60I, D123E, I135T, D177E, I195L, Q197R, R211K, F214L, A272P, T286A, V292I, E297K, V317A, I329L, R358K, T369A, A376T, K390R, E399D, A400T, E404D, D460N, R461K, L491S, A554T  
09LNA446 09LNA446 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V, P313T, G335D, T338S, R356K, G359T, E370D, T377M, K390R, A400T, E404D, E432D, V435A, A437V, L452I, Q464K, D471E, Q480H, H483C, L491S, S519N, K530R, A534S, A554S  
09LNA527 09LNA527 None None   E6D, K11T, V35T, T39R, K43E, K49R, K103R, K122E, D123S, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, K277R, K281R, T286A, E291D, V292I, I293V, I309L, E312T, I326V, I329V, G335D, P345Q, F346Y, M357K, G359S, K366R, T369A, A371V, A376S, K390R, K395R, A400T, T403A, E432D, N447S, D460N, Q464K, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S  
09LNA745 09LNA745 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, K102R, K122E, V245Q, E248V, K249Q, A272P, V276I, K277R, T286A, E291D, V292I, I293V, I309L, G335D, T338S, R356K, G359T, T377M, K388R, K390R, A400T, E404D, E432D, A437V, L452I, Q464K, D471E, Q480H, H483Y, L491S, S519N, K530R, A534S, A554S  
10LNA016 10LNA016 None None   P4H, E6D, K11T, V35T, T39K, K43E, K64R, V118I, K122E, D123S, I135T, K173G, Q174K, D177E, G196R, T200I, I202V, Q207A, R211S, F214L, K238R, V245E, V276I, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, E432D, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
10LNA057 10LNA057 None None   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, V276I, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, R356K, M357K, G359S, K366R, T369A, A371V, K390R, K395R, A400T, E432D, D460N, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, I526V, K530R, A534S, A554S  
10LNA103 10LNA103 None None   I5V, E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135T, S162C, K173N, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, A272P, K281R, E291D, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, E370D, A371V, K388R, K390R, A400T, T403M, N447S, D471E, Q480H, L491S, K512R, L517T, S519N, Q524D, A534S  
10LNA105 10LNA105 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, I202V, Q207A, R211S, F214L, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, P345Q, M357K, G359S, K366R, T369A, A371V, K390R, K395R, A400T, E432D, N447S, L452I, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
10LNA124 10LNA124 None None   I5V, E6D, K11T, V35T, T39K, K43Q, K122E, D123S, I135T, S162C, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400L, T403M, N447S, D460N, D471E, Q480H, H483L, L484I, L491S, K512R, L517A, S519N, Q524E, A534S, A554S  
10LNA264 10LNA264 None None  V108I E6D, V35T, T39K, K43E, K122E, D123S, K173R, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, A272P, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, P345Q, F346Y, M357K, R358G, G359S, K366R, T369A, E370A, A371V, K390R, K395R, A400T, E404D, E432D, N447S, R448K, D460N, K465E, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
10LNA294 10LNA294 None None   E6D, V35T, T39K, K43E, K122E, D123S, I135T, K173M, Q174K, D177E, T200I, Q207A, R211S, K238R, V245E, K281R, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, K395R, A400T, T403S, E432D, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, K530R, A534S, A554S  
10LNA571 10LNA571 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, Q207A, R211S, K238R, E248A, V276I, T286A, E291D, V292I, I293V, E312T, V317T, I329V, M357K, G359S, K366R, A371V, K390R, A400T, T403M, N447S, V458I, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
10LNA669 10LNA669 None None   E6D, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, K277R, T286A, E291D, V292I, I293V, I309L, E312T, I326V, I329V, G335D, P345Q, F346Y, M357K, G359S, K366R, T369A, A371V, K390R, K395R, A400T, T403A, E432D, N447S, D460N, Q464K, S468T, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, V531I, A534S, A554T M41K 
10LNA819 10LNA819 None None   I5V, E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135T, S162C, D177E, I178M, T200A, Q207A, R211S, K238R, V245E, T286A, E291D, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400L, T403M, N447S, D460N, D471E, Q480H, H483L, L484I, L491S, K512R, L517A, S519N, Q524E, A534S, A554S  
10LNA821 10LNA821 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135T, K173R, Q174K, D177E, T200I, Q207A, R211S, F214L, K238R, V245E, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, P345Q, M357K, G359S, T369A, E370D, A371L, K390R, K395R, A400T, E432D, N447S, R448K, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, A534S, A554S  
10LNA918 10LNA918 None None   E6D, V35T, T39K, K43E, K122E, D123S, I135T, K173M, Q174K, D177E, T200I, Q207A, R211S, K238R, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, K395R, A400T, T403S, E432D, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, I526V, K530R, A534S, A554S  
10LNA976 10LNA976 None None   E6D, K11R, K22R, V35T, T39K, K122E, D123S, I135T, K173I, Q174K, D177E, T200I, Q207A, R211S, F214L, V245E, T286A, E291D, V292I, I293V, P294T, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, K431R, E432D, N447S, R448K, D460N, D471E, Q480H, H483Y, G490E, L491S, K512R, L517I, S519N, Q524E, A534S, A554S