Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author An (2012)
Title Reconstituting the epidemic history of HIV strain CRF01_AE among men who have sex with men (MSM) in Liaoning, northeastern China: Implications for the expanding epidemic among MSM in China
Citation J Virol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 39
NumPts 39
Subtype CRF01_AE, C, B

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
08LNA001 08LNA001 None    V31I, V32I, D41N, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, S283G  
08LNA002 08LNA002 None    E11D, A21T, A23S, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
08LNA003 08LNA003 None    V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, I203M, L234I, S283G, D288N  
08LNA004 08LNA004 None    K14R, A21T, V31I, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
09LNA005 09LNA005 None    K14R, V31I, T112V, T124A, T125A, G134N, K136Q, D167E, V201I, L234I, S283G  
09LNA007 09LNA007 None    K14R, A21T, A23V, V31I, T112V, I113V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G  
09LNA008 09LNA008 None    K14R, V31I, I72V, T112V, I113V, T124A, T125A, G134N, I135V, K136R, H171Q, G193E, V201I, I203M, L234I, S283G, D288N  
09LNA011 09LNA011 None    K14R, V31I, I72V, T112V, I113V, T124A, T125A, G134N, I135V, K136R, H171Q, G193E, V201I, I203M, L234I, S283G, D288N  
09LNA013 09LNA013 None    K14R, A21T, V31I, V32I, I72T, T112V, T124A, T125A, V126L, G134N, I135V, K136R, D167E, V201I, L234I, S283G, D288N  
09LNA014 09LNA014 None    E11D, V37I, I72V, L101I, T112A, S119P, T125A, I200M, V201I, Q252K, I268L  
09LNA020 09LNA020 None    E11D, A21T, V31I, I60L, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
09LNA025 09LNA025 None    K14R, A21T, T112V, I113V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G  
09LNA040 09LNA040 None    K14R, A21T, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
09LNA041 09LNA041 None    K14R, A21T, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
09LNA136 09LNA136 None    K14R, A21T, T112V, T124A, T125A, G134N, K136R, D167E, V201I, L234I, S283G  
09LNA230 09LNA230 None    E11D, A21T, V31I, I60L, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K215N, L234I, S283G A23C 
09LNA336 09LNA336 None    G149A, K156N, R187K, K188R, S255R, K264R  
09LNA340 09LNA340 None    K14R, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, L234I, S283G, D288N  
09LNA353 09LNA353 None    K14R, A21T, V31I, I60L, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, D278E, S283G, D288N  
09LNA379 09LNA379 None   L74M K14R, A21T, N27G, S39N, L45Q, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G, D286N  
09LNA423 09LNA423 None    K14R, V31I, V32I, I72V, V88I, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
09LNA425 09LNA425 None    K14R, A21T, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
09LNA439 09LNA439 None    K14R, R20K, A23V, L28I, S39C, V201I, K215N, S255N, I268L  
09LNA446 09LNA446 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, L234S, R269K, S283G  
09LNA527 09LNA527 None    K14R, A21T, V31I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K211R, L234I, S283G  
09LNA745 09LNA745 None    V31I, K42Q, L101I, T112V, T124A, T125A, I135L, K136Q, V201I, R269K, S283G L234R 
10LNA016 10LNA016 None    K14R, A21T, V31I, T112V, T124A, T125A, G134N, K136R, E157G, D167E, V201I, L234I, S283G  
10LNA057 10LNA057 None    K14R, A21T, V31I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
10LNA103 10LNA103 None    K14R, R20K, V31I, V32I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, G193E, V201I, L234I, D256E, S283G  
10LNA105 10LNA105 None    K14R, A21T, V31I, T112V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G  
10LNA124 10LNA124 None    K14R, I72V, T112V, T124A, T125A, G134N, I135V, K136R, G193E, V201I, L234I, S283G, D288N  
10LNA264 10LNA264 None    K14R, A21T, V31I, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, V281M, S283G  
10LNA294 10LNA294 None    K14R, A21T, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, S230N, L234I, S283G  
10LNA571 10LNA571 None    E11D, K14R, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, L234V, S283G, D286N  
10LNA669 10LNA669 None    K14R, A21T, V31I, V32I, I72T, T112V, T124A, T125A, V126L, K127R, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
10LNA819 10LNA819 None    K14R, R20K, I72V, T112V, T124A, T125A, G134N, I135V, K136R, G193E, V201I, L234I, S283G, D288N K156E 
10LNA821 10LNA821 None    K14R, A21T, V31I, I60L, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, T218K, L234I, S283G D3N, I217K 
10LNA918 10LNA918 None    K14R, A21T, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
10LNA976 10LNA976 None    K14R, A21T, T112V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G