Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Fokam (2011)
Title Drug resistance among drug-naive and first-line antiretroviral treatment-failing children in Cameroon.
Citation Pediatr Infect Dis J
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 80
NumPts 80
Subtype CRF02_AG, CRF01_AE, F, G, J, CRF45_cpx, D, A, G + J, CRF05_DF, CRF13_cpx, CRF18_cpx, CRF49_cpx


Clinical PR Isolates

CIRCB-10124 CIRCB-10124 None    L10LV, T12A, I13V, I15V, K20I, E35D, M36I, R41K, K43R, Q61H, L63P, G68E, H69R, K70R, L89M  
CIRCB-10155 CIRCB-10155 None    L10IV, K20R, E35D, M36I, R41K, D60E, I62V, L63P, I64IV, H69Q, I93L  
CIRCB-10183 CIRCB-10183 None    L10I, E35D, M36I, R57RK, I62V, L63AP, I64L, H69Q, L89M  
CIRCB-10196 CIRCB-10196 None    L10I, T12K, I13V, G17E, L19LP, K20I, M36I, R41K, K45R, L63S, C67Y, H69K, K70R, L89M  
CIRCB-10232 CIRCB-10232 None    I13V, K14Q, G17E, K20I, E34KT, E35D, M36I, R41RK, R57K, Q61H, L63I, I64M, H69C, K70R, I72E, P79PL, L89M  
CIRCB-10235 CIRCB-10235 None    L10V, I13V, L19P, K20I, M36I, R41K, I64IV, H69K, K70R, L89M  
CIRCB-10273 CIRCB-10273 None    I13V, K14KR, K20IV, E35D, M36I, R41K, H69K, T74S, L89M  
CIRCB-10305 CIRCB-10305 None    I13V, K14R, I15IV, G16E, K20I, M36I, R41K, H69K, K70E, L89I  
CIRCB-10351 CIRCB-10351 None    L10I, I13V, K20I, E35D, M36I, R41K, H69Q, L89M  
CIRCB-10362 CIRCB-10362 None    I13V, G17E, K20I, M36I, L63S, H69K, L89M  
CIRCB-10398 CIRCB-10398 None    L10I, T12A, I13V, K14R, I15V, L19LP, K20I, M36I, R41K, H69K, L89I, F99L  
CIRCB-10430 CIRCB-10430 None    I13A, L19LV, K20I, M36I, N37D, L63P, H69K, K70R, I72M, L89I  
CIRCB-10494 CIRCB-10494 None    T12TK, I13V, K14KR, K20I, E35DN, M36I, N37E, R41K, L63I, I64L, H69K, K70KR, L89M  
CIRCB-10536 CIRCB-10536 None    I13V, G16A, K20KR, E35D, M36I, N37D, R41K, E65D, H69K, V82VI, L89M  
CIRCB-10544 CIRCB-10544 None    I13V, K14R, I15V, K20I, M36I, R41K, I64M, H69K, L89M  
CIRCB-10552 CIRCB-10552 None    I13V, E35N, M36I, N37D, R41K, I62IV, L63PS, H69K, K70R, L89M  
CIRCB-10613 CIRCB-10613 None    I13V, K14KR, I15V, K20I, E35D, M36I, N37D, R41K, L63P, I64M, C67Y, H69K, V77I, L89M  
CIRCB-10615 CIRCB-10615 None   M46MV, I47IM T12TP, I13V, K14R, I15V, Q18E, K20KR, E35D, M36I, N37DE, R41RK, H69K, L89M D25DG 
CIRCB-10695 CIRCB-10695 None    T12K, I13V, K14R, G16GE, L19I, K20I, E35D, M36I, N37S, R41K, L63I, I64M, H69K, L89M  
CIRCB-10696 CIRCB-10696 None    T12K, I13V, K14KR, I15V, L19I, K20I, M36T, R41K, L63V, I64M, H69K, L89M  
CIRCB-10738 CIRCB-10738 None   L33F T12K, I13V, G16E, K20V, M36L, N37S, P39S, R41K, H69K, L89M  
CIRCB-10740 CIRCB-10740 None    I13V, K14R, I15V, K20I, E35N, M36I, R41N, H69K, L89M  
CIRCB-10950 CIRCB-10950 None    I13V, K20I, M36I, N37D, R41K, H69K, T74S, L89M  
CIRCB-10965 CIRCB-10965 None    I15V, K20R, E35D, M36I, R41K, K45R, R57K, I62V, L63P, H69Q, L89M  
CIRCB-10996 CIRCB-10996 None   L33F I13V, K14R, L19K, K20I, M36I, P39PS, R41N, H69K, L89M  
CIRCB-11004 CIRCB-11004 None    K20R, E35D, M36I, N37ND, R41K, H69K, L89M  
CIRCB-11058 CIRCB-11058 None    I13V, L19P, K20I, E35D, M36I, R41K, H69K, L89M  
CIRCB-11060 CIRCB-11060 None    T4TN, I13V, K14R, G16E, K20I, M36I, R41K, I64M, H69K, K70R, L89M  
CIRCB-11066 CIRCB-11066 None    L10V, I13V, K14R, K20I, M36I, N37NS, R41K, H69K, L89M  
CIRCB-11096 CIRCB-11096 None    L10V, I15V, K20R, M36I, R41K, I62V, L63T, E65ED, H69Q  
CIRCB-11106 CIRCB-11106 None    I13IV, I15V, K20R, E35D, M36I, N37E, R41RK, K45KR, H69K, K70KR, L89M  
CIRCB-11195 CIRCB-11195 None    I13V, K14R, G17E, K20I, M36I, R41K, H69K, L89M  
CIRCB-11442 CIRCB-11442 None    L10LV, I13V, K14KR, L19P, K20I, M36I, N37ND, R41RK, I64L, H69K, L89M  
CIRCB-11514 CIRCB-11514 None    L10LV, I13V, K14R, G16GEQR, K20I, M36I, R41K, H69K, K70E, L89M  
CIRCB-11539 CIRCB-11539 None    L10V, I15IV, K20R, E35D, M36I, N37NS, P39T, R41K, D60E, I62V, L63P, H69Q G94V 
CIRCB-11621 CIRCB-11621 None    I13V, K14KR, K20I, M36I, R41K, K43R, H69K, K70KR, L89M  
CIRCB-11643 CIRCB-11643 None    L10I, I13IV, K14R, K20R, E35D, M36I, R41K, K45R, L63T, H69Q, L89M  
CIRCB-11689 CIRCB-11689 None    L10I, I13V, G16E, K20I, E35D, M36I, L63V, H69N, L89M  
CIRCB-11745 CIRCB-11745 None    I13V, K20I, E34T, M36I, P39L, R41K, I62V, H69K, L89M  
CIRCB-11792 CIRCB-11792 None    T12A, G16A, R57K, D60E, Q61D, C67E, H69K, V77I, L89M  
CIRCB-11796 CIRCB-11796 None    T4P, L10I, E35D, M36I, R41K, L63T, C67E, H69K, L89M  
CIRCB-11835 CIRCB-11835 None    I13V, K14R, G16E, L19LP, K20I, M36I, R41K, H69K, L89IM  
CIRCB-11877 CIRCB-11877 None    L10I, I13V, L19P, K20I, M36I, R41K, L63V, H69K, L89M  
CIRCB-12062 CIRCB-12062 None    I13V, G16E, L19I, K20I, E35K, M36I, R41K, K43R, H69K, L89M  
CIRCB-12162 CIRCB-12162 None    I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70KR, L89M  
CIRCB-12221 CIRCB-12221 None    T12TA, I13V, L19P, K20I, M36I, R41KN, Q61H, H69K, K70KR, L89M T96TN 
CIRCB-12227 CIRCB-12227 None    L10I, T12A, K14R, G16A, L19V, M36I, N37D, D60E, Q61E, L63I, C67E, H69K, L89M, I93L C95G 
CIRCB-12235 CIRCB-12235 None    I13V, K20I, M36I, N37D, R41K, H69K, K70R, L89M T26TS 
CIRCB-12481 CIRCB-12481 None    L10LV, I13V, K14R, G16GE, K20I, M36I, R41K, I64M, H69K, K70KR, L89M L19HP 
CIRCB-12497 CIRCB-12497 None    I13V, L19I, E35D, M36I, R41K, H69K, L89M  
CIRCB-12541 CIRCB-12541 None    L10I, I13V, G16E, K20I, E35ED, M36I, R41K, C67HQ, H69K, L89M  
CIRCB-1519 CIRCB-1519 None    I15V, E35D, M36I, R41K, L63P, H69Q  
CIRCB-1641 CIRCB-1641 None    V11VF, I13V, K14IR, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
CIRCB-2223 CIRCB-2223 None    I13V, L19P, K20I, M36I, N37NS, R41K, K43KR, L63P, H69K, L89M  
CIRCB-3194 CIRCB-3194 None  M46I, L90M  I13V, K14R, G17E, K20I, E35D, M36V, R41K, I62V, I64V, C67S, H69K, V82I, L89M  
CIRCB-3241 CIRCB-3241 None    I13V, K14R, K20R, M36I, N37D, R41K, H69K, K70R, L89I, N98K  
CIRCB-3379 CIRCB-3379 None    T12V, I13V, K20I, E35D, M36I, R41K, L63LP, H69K, L89M G16M 
CIRCB-4061 CIRCB-4061 None    I13V, K14R, G17E, Q18H, K20I, E34K, M36I, N37E, P39V, D60E, Q61N, I62M, L63A, C67E, H69K, I72V, V77I, L89M  
CIRCB-4069 CIRCB-4069 None    T12I, I13V, G17E, K20I, E34K, M36I, R57K, Q61N, I62LM, L63N, C67E, H69K, I72T, V77VI, L89M  
CIRCB-4899 CIRCB-4899 None    L10V, I13V, I15V, E35ED, M36I, R41K, H69K, L89M  
CIRCB-7171 CIRCB-7171 None    I13A, K20I, M36I, R41K, H69K, L89M  
CIRCB-7205 CIRCB-7205 None    L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
CIRCB-7759 CIRCB-7759 None    L10LI, I13V, L19LV, K20R, E35D, M36I, N37D, R41K, H69K, L89M R8RP, E21E*, L90LW 
CIRCB-7815 CIRCB-7815 None    I13V, K14KR, G16GE, K20I, E35D, M36I, R41K, K43KR, H69K, K70KR, L89M, I93IM  
CIRCB-7842 CIRCB-7842 None    I13V, I15V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, V77I, L89M  
CIRCB-7949 CIRCB-7949 None    L10I, I13V, I15IV, L19P, K20I, E35DN, M36I, R41K, K45R, L63P, H69Q, I72V, L89M, T91TN I64K, T96TN 
CIRCB-8845 CIRCB-8845 None    L10LI, I13V, K20R, E35D, M36I, N37D, R41K, R57RK, L63LP, H69K, I72IV, L89M  
CIRCB-8956 CIRCB-8956 None    I13V, K20I, E35N, M36I, R41K, H69K, L89M  
CIRCB-8995 CIRCB-8995 None    I15IV, K20R, M36I, R41K, L63AV, K70KR, I72IM  
CIRCB-9210 CIRCB-9210 None    I13V, K14R, G16E, K20I, M36MI, N37NS, R41K, I64M, H69K, K70R, L89M  
CIRCB-9281 CIRCB-9281 None    I15V, G16GA, Q18QE, E35D, M36I, N37D, R41RK, R57K, D60E, Q61E, L63A, C67EG, H69K, V77I, L89M  
CIRCB-9470 CIRCB-9470 None    L10V, I15V, K20R, E35D, M36I, R41K, K45R, H69Q, I72V, L89M  
CIRCB-9552 CIRCB-9552 None    L5LF, I13V, K14KR, G17E, K20KI, A22AT, M36I, N37D, R41K, K43KR, H69K, K70R, L89M  
CIRCB-9583 CIRCB-9583 None   I47IM I13V, K20I, M36I, R41K, C67S, H69K, V82I, L89M  
CIRCB-9626 CIRCB-9626 None    I13IV, K14R, L19LI, K20I, E35N, M36I, R41K, I64M, H69K, L89M  
CIRCB-9660 CIRCB-9660 None    I13V, K20I, E35N, M36I, R41K, H69K, V77I, L89M  
CIRCB-9830 CIRCB-9830 None    I13V, K14R, G17E, K20I, E35ED, M36I, N37A, L63P, H69K, L89M  
CIRCB-9860 CIRCB-9860 None    T12S, I15V, G16E, L19I, E35D, M36MI, P39S, R41K, D60DE, Q61DN, L63H  
CIRCB-9936 CIRCB-9936 None    T12A, I13V, K14R, G16E, K20I, M36I, R41K, H69K, I72V, L89M  
CRICB-9078 CIRCB-9078 None   V11VI L10M, I13V, K14KR, I15IV, L19P, K20I, E35D, M36I, R41K, L63LP, H69K, L89I