<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Musyoki (2012)
Title Genetic characterization of HIV before widespread testing of HIV vaccine candidates at a clinical trial site in Pretoria, South Africa.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 25
NumPts 25
Subtype C


Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
DGM.1 DGM.1 None None   E6K, V35T, E36A, T39E, S48T, V60I, K122E, D123G, S162A, K173T, D177E, T200A, Q207E, R211K, V245Q, D250N, A272P, K277R, T286A, E291D, V292I, Q334H, G335D, R356K, M357R, G359A, T377L, K390R, A400T, E404D, W414R, N418T, T419Y, L422Y, V423L  
DGM.11 DGM.11 None None  Y181C K20R, V35T, T39E, K122E, I135T, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, R211K, F214L, V245Q, A272P, K275R, Q278Y, T286A, E291D, V292I, I293V, I329V, Q334H, G335D, G359T, T369S, A371V, T377Q, S379C, K390R, E396D, A400T, E404D, W426X, L429X  
DGM.13 DGM.13 None None   V35T, T39E, S48T, E53D, K102Q, K122E, D123S, K166R, K173A, Q174E, D177E, T200A, Q207D, R211K, D250E, A272P, K277R, T286A, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T377L, T386V, K388R, K390R, A400T, E404D  
DGM.15 DGM.15 None None   V35T, E36A, T39E, S48T, K122E, D123G, K173A, D177E, T200E, Q207E, R211K, V245Q, D250N, A272P, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, F346H, R356K, G359S, T377M, K390R, A400T, E404D, K424~, L425I  
DGM.16 DGM.16 None None  V179D K20R, V35T, T39E, S48T, V60I, K122E, T139K, S162C, K173A, Q174R, T200A, I202V, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, K311R, Q334N, G335D, R356K, G359T, T369A, T377M, K390R, A400T, E404D  
DGM.19 DGM.19 None None  K103N V35T, T39E, A98S, K122E, D123S, E138D, K173A, D177G, T200A, Q207E, R211K, F214L, V245Q, A272P, I293V, E297K, Q334N, G335D, R356K, G359T, T377L, K390R, A400I, E404D, V423E  
DGM.2 DGM.2 None None   V35K, E36A, T39E, S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207N, R211K, V245Q, P247A, A272P, T286A, E291D, V292I, I293V, G335E, R356K, M357R, R358K, G359S, E370D, T377M, T386I, K390R, E399D, A400T, W402G, T403~, P412L, W414R, F416~, T419P, L422K  
DGM.20 DGM.20 None None   V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, T165I, K173A, Q174K, T200A, Q207D, R211K, V245Q, A272P, V292I, I293V, K311R, D324E, G335D, R356K, M357R, G359T, T377S, K390R, A400L, E404D  
DGM.21 DGM.21 None None   P4S, V35T, T39E, E40D, S48T, V60I, K122E, K173A, D177E, T200A, E204K, Q207D, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, M357R, G359T, T377Q, K390R, A400T, E404D, W414R  
DGM.25 DGM.25 None None   V35T, T39E, K82R, A98S, K122E, K173A, Q174K, D177E, V179I, T200A, I202V, Q207K, R211M, V245Q, E248D, A272Q, I274L N265T 
DGM.28 DGM.28 None None   V35T, T39E, S48T, V60I, K122E, D123G, K173A, T200A, E204D, Q207T, R211K, V245Q, A272P, E291D, V292I, I293V, I326V, G335D, R356K, G359T, T377L, K390R, A400T  
DGM.29 DGM.29 None None   K20R, V35T, E36A, T39E, S48T, K122E, D123N, A158S, K173A, D177E, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, K277R, Q278H, L279I, K281R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, M357I, G359S, T377M, T386I, K390R, A400T, E404D  
DGM.3 DGM.3 None None   V35K, E36A, T39E, K122E, S162C, K173T, Q174K, D177E, I178M, T200A, Q207E, V245Q, I257L, A272P, E291D, V292I, I293V, P313T, V317A, P345L, F346L, N348T, R356K, G359T, T377I, L391V, Q394H, E396G, E399X, W402G, E404G, Y405D, W410R, I411M, P412L, W414R, T419P Q336K, W337G, T338R, L349V, T351S, H361G, T362E, N363A, P387H, K390G, P392T, I393P, W401G, W406S, F416Q 
DGM.30 DGM.30 None None   V35K, E36A, T39E, S48E, D123E, T139A, K173T, D177E, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, M357K, R358K, G359S, E370D, I375V, T377L, K385R, K390R, E399D, A400T, E404D, E430R, E432G  
DGM.33 DGM.33 None None   V35T, E36A, T39E, S48T, K122E, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q, D250E, A272P, K275R, K277R, E291D, V292I, I293V, Q334H, G335D, R356K, M357V, G359T, A360T, T377Q, S379C  
DGM.35 DGM.35 None None   K11R, V35I, T39E, S48T, K122E, K173T, Q174K, D177E, T200A, Q207D, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, Q334H, G335D, R356K, R358K, G359N, Q367M, T377Q, S379C, K390R, A400T, E404D, W414R  
DGM.37 DGM.37 None None   E28K, K32E, V35T, E36A, T39E, S48T, V60I, K122E, D123S, K173A, D177E, T200A, E204D, Q207E, V245Q, K281R, E291D, V292I, I293V, I329L, Q334H, G335D, I341X, K347X, R356K, M357X, G359P, E370X A360P, H361N 
DGM.38 DGM.38 None None   V35T, T39E, S48T, K122E, E138A, I142V, F171Y, K173T, Q174R, T200A, Q207E, R211K, F214L, V245Q, E248D, A272P, K275R, Q278N, T286A, E291D, V292I, I293V, I329V, G335D, A355T, R356K, G359S, T377M, K390R, E396D, T397M, A400T, E404D, F416Y  
DGM.39 DGM.39 None None   V35T, E36A, T39E, S48T, V60I, K122P, K173A, Q174R, D177E, G196E, T200A, Q207E, V245K, K281R, E291D, V292I, I293V, S322A, D324E, G335D, R356K, M357R, G359T, T369A, T377I, K390R, A400T, E404D, W414R, F416Y  
DGM.4 DGM.4 None None   V35T, E36A, T39E, S48T, V60I, K102Q, K122E, D123N, I135V, S162A, K173A, D177E, T200A, E204K, Q207E, R211K, F214L, P243L, V245Q, L246M, E248D, A272P, Q278Y, T286A, L289I, E291D, V292I, I293V, L295M, A304E, D324E, A327G, G335D, Y342S, E344D, R356K, G359T, K366R, T377M, K390R, A400T  
DGM.5 DGM.5 None None   V35T, T39E, S48T, K82R, A98S, K122E, K166R, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272S, K277R, L282C, T286A, V292I, I293V, P294T, Q334H, G335D, R356K, G359T, T377Q, K390R, A400I, E404D  
DGM.6 DGM.6 None None   V35T, E36A, T39E, K122E, D123S, K173T, G196E, T200A, E204K, Q207E, F214L, V245T, A272P, T286A, E291D, V292I, I293V, D324E, Q334H, G335D, R356K, G359T, T377V, K390R, A400T, E404D  
DGM.7 DGM.7 None None   V35T, E36A, T39E, S48T, A98S, K122E, D123S, E138A, T139A, S162C, K173A, Q174R, D177E, T200A, Q207A, P243A, V245Q, A272P, K277R, T286A, V292I, I293V, L303M, Q334N, G335D, R356K, G359T, K366R, T377Q, K390R, E399D, A400T, E404D, V423E, L429M, K431E  
DGM.8 DGM.8 None None   K20R, K22R, V35M, E36A, T39E, S48T, K122E, D123N, Q145V, A158S, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, I274V, K281R, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T369A, T377M, K390R, A400T, T403S, E404D, L425I, L429S, K431E, E432K  
DGM.9 DGM.9 None None   P4S, V35T, T39E, K122E, K173A, Q174R, D177E, T200A, Q207E, R211K, V245Q, E248N, A272P, K277R, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, A376T, T377I, K390R, P392X, K395R, E404D, A408X, W410G, I411S E396~, A400C, W401~, W402~, T403E, P412E