<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Musyoki (2012)
Title Genetic Characterization of HIV Before Widespread Testing of HIV Vaccine Candidates at a Clinical Trial Site in Pretoria, South Africa.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 25
NumPts 25
Subtype C

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
DGM.1 DGM.1 None None   E6K, V35T, E36A, T39E, S48T, V60I, K122E, D123G, S162A, K173T, D177E, T200A, Q207E, R211K, V245Q, D250N, A272P, K277R, T286A, E291D, V292I, Q334H, G335D, R356K, M357R, G359A, T377L, K390R, A400T, E404D, W414R N418T, T419Y, L422Y, V423L 
DGM.11 DGM.11 None None  Y181C K20R, V35T, T39E, K122E, I135T, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, R211K, F214L, V245Q, A272P, K275R, Q278Y, T286A, E291D, V292I, I293V, I329V, Q334H, G335D, G359T, T369S, A371V, T377Q, S379C, K390R, E396D, A400T, E404D, W426X, L429X  
DGM.13 DGM.13 None None   V35T, T39E, S48T, E53D, K102Q, K122E, D123S, K166R, K173A, Q174E, D177E, T200A, Q207D, R211K, D250E, A272P, K277R, T286A, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T377L, T386V, K388R, K390R, A400T, E404D  
DGM.15 DGM.15 None None   V35T, E36A, T39E, S48T, K122E, D123G, K173A, D177E, T200E, Q207E, R211K, V245Q, D250N, A272P, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, F346H, R356K, G359S, T377M, K390R, A400T, E404D, L425I K424~ 
DGM.16 DGM.16 None None  V179D K20R, V35T, T39E, S48T, V60I, K122E, T139K, S162C, K173A, Q174R, T200A, I202V, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, K311R, Q334N, G335D, R356K, G359T, T369A, T377M, K390R, A400T, E404D  
DGM.19 DGM.19 None None  K103N V35T, T39E, A98S, K122E, D123S, E138D, K173A, D177G, T200A, Q207E, R211K, F214L, V245Q, A272P, I293V, E297K, Q334N, G335D, R356K, G359T, T377L, K390R, A400I, E404D V423E 
DGM.2 DGM.2 None None   V35K, E36A, T39E, S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207N, R211K, V245Q, P247A, A272P, T286A, E291D, V292I, I293V, G335E, R356K, M357R, R358K, G359S, E370D, T377M, T386I, K390R, E399D, A400T, P412L, W414R W402G, T403~, F416~, T419P, L422K 
DGM.20 DGM.20 None None   V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123G, T165I, K173A, Q174K, T200A, Q207D, R211K, V245Q, A272P, V292I, I293V, K311R, D324E, G335D, R356K, M357R, G359T, T377S, K390R, A400L, E404D  
DGM.21 DGM.21 None None   P4S, V35T, T39E, E40D, S48T, V60I, K122E, K173A, D177E, T200A, E204K, Q207D, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, M357R, G359T, T377Q, K390R, A400T, E404D, W414R  
DGM.25 DGM.25 None None   V35T, T39E, K82R, A98S, K122E, K173A, Q174K, D177E, V179I, T200A, I202V, Q207K, R211M, V245Q, E248D, A272Q, I274L N265T 
DGM.28 DGM.28 None None   V35T, T39E, S48T, V60I, K122E, D123G, K173A, T200A, E204D, Q207T, R211K, V245Q, A272P, E291D, V292I, I293V, I326V, G335D, R356K, G359T, T377L, K390R, A400T  
DGM.29 DGM.29 None None   K20R, V35T, E36A, T39E, S48T, K122E, D123N, A158S, K173A, D177E, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, K277R, Q278H, L279I, K281R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, M357I, G359S, T377M, T386I, K390R, A400T, E404D  
DGM.3 DGM.3 None None   V35K, E36A, T39E, K122E, S162C, K173T, Q174K, D177E, I178M, T200A, Q207E, V245Q, I257L, A272P, E291D, V292I, I293V, P313T, V317A, Q336K, W337G, P345L, F346L, N348T, R356K, G359T, T377I, L391V, Q394H, E396G, E399X, E404G, Y405D, W410R, P412L, W414R T338R, L349V, T351S, H361G, T362E, N363A, P387H, K390G, P392T, I393P, W401G, W402G, W406S, I411M, F416Q, T419P 
DGM.30 DGM.30 None None   V35K, E36A, T39E, S48E, D123E, T139A, K173T, D177E, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, M357K, R358K, G359S, E370D, I375V, T377L, K385R, K390R, E399D, A400T, E404D, E430R, E432G  
DGM.33 DGM.33 None None   V35T, E36A, T39E, S48T, K122E, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q, D250E, A272P, K275R, K277R, E291D, V292I, I293V, Q334H, G335D, R356K, M357V, G359T, A360T, T377Q, S379C  
DGM.35 DGM.35 None None   K11R, V35I, T39E, S48T, K122E, K173T, Q174K, D177E, T200A, Q207D, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, Q334H, G335D, R356K, R358K, G359N, Q367M, T377Q, S379C, K390R, A400T, E404D, W414R  
DGM.37 DGM.37 None None   E28K, K32E, V35T, E36A, T39E, S48T, V60I, K122E, D123S, K173A, D177E, T200A, E204D, Q207E, V245Q, K281R, E291D, V292I, I293V, I329L, Q334H, G335D, I341X, K347X, R356K, M357X, G359P, E370X A360P, H361N 
DGM.38 DGM.38 None None   V35T, T39E, S48T, K122E, E138A, I142V, F171Y, K173T, Q174R, T200A, Q207E, R211K, F214L, V245Q, E248D, A272P, K275R, Q278N, T286A, E291D, V292I, I293V, I329V, G335D, A355T, R356K, G359S, T377M, K390R, E396D, T397M, A400T, E404D, F416Y  
DGM.39 DGM.39 None None   V35T, E36A, T39E, S48T, V60I, K122P, K173A, Q174R, D177E, G196E, T200A, Q207E, V245K, K281R, E291D, V292I, I293V, S322A, D324E, G335D, R356K, M357R, G359T, T369A, T377I, K390R, A400T, E404D, W414R, F416Y  
DGM.4 DGM.4 None None   V35T, E36A, T39E, S48T, V60I, K102Q, K122E, D123N, I135V, S162A, K173A, D177E, T200A, E204K, Q207E, R211K, F214L, P243L, V245Q, L246M, E248D, A272P, Q278Y, T286A, L289I, E291D, V292I, I293V, L295M, A304E, D324E, A327G, G335D, E344D, R356K, G359T, K366R, T377M, K390R, A400T Y342S 
DGM.5 DGM.5 None None   V35T, T39E, S48T, K82R, A98S, K122E, K166R, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272S, K277R, L282C, T286A, V292I, I293V, P294T, Q334H, G335D, R356K, G359T, T377Q, K390R, A400I, E404D  
DGM.6 DGM.6 None None   V35T, E36A, T39E, K122E, D123S, K173T, G196E, T200A, E204K, Q207E, F214L, V245T, A272P, T286A, E291D, V292I, I293V, D324E, Q334H, G335D, R356K, G359T, T377V, K390R, A400T, E404D  
DGM.7 DGM.7 None None   V35T, E36A, T39E, S48T, A98S, K122E, D123S, E138A, T139A, S162C, K173A, Q174R, D177E, T200A, Q207A, P243A, V245Q, A272P, K277R, T286A, V292I, I293V, L303M, Q334N, G335D, R356K, G359T, K366R, T377Q, K390R, E399D, A400T, E404D, K431E V423E, L429M 
DGM.8 DGM.8 None None   K20R, K22R, V35M, E36A, T39E, S48T, K122E, D123N, Q145V, A158S, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, I274V, K281R, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T369A, T377M, K390R, A400T, T403S, E404D, L425I, K431E L429S, E432K 
DGM.9 DGM.9 None None   P4S, V35T, T39E, K122E, K173A, Q174R, D177E, T200A, Q207E, R211K, V245Q, E248N, A272P, K277R, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, A376T, T377I, K390R, P392X, K395R, E404D, A408X, W410G E396~, A400C, W401~, W402~, T403E, I411S, P412E 

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