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Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author De Gascun (2012)
Title Human Immunodeficiency Virus Type 1 in Ireland: Phylogenetic Evidence for Risk Group-Specific Subepidemics.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 824
NumPts 824
Subtype B, C, CRF02_AG, A, G, CRF01_AE, D, F, K

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Page 1   from Isolate 1 to Isolate 100 from Total 824 Clinical PR Isolates

SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
IRL01320 IRL01320 None    I15IL, K20R, E35D, M36I, N37D, R41K, H69K, K70KR, L89I L97L* 
IRL01413 IRL01413 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M  
IRL01445 IRL01445 None   L76LF L10V, I13V, G16E, K20I, M36I, R41K, K43KR, H69K, K70R, L89M L38LS, R57R*, I64IK 
IRL02933 IRL02933 None    I13V, K14R, G17E, K20I, M36I, N37E, R41K, H69K, K70R, L89M  
IRL05105 IRL05105 None    L10I, T12X, I13IV, G16GE, Q18QH, E35D, M36I, R57K, L63S, H69K, L89M  
IRL05293 IRL05293 None    L10LI, I13V, K14R, E35D, M36I, N37E, R41K, R57K, L63LIPT, H69K, L89M  
IRL05422 IRL05422 None    L10M, I13V, K20R, E35D, M36I, P39Q, R41K, R57K, D60E, Q61E, I62V, C67Y, H69K, K70R, L89M  
IRL05625 IRL05625 None    I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
IRL05772 IRL05772 None    L10I, I13IV, K14KR, K20KR, E35D, M36I, N37D, R41K, R57K, D60E, L63LP, H69Q, L89M  
IRL07241 IRL07241 None    I13V, K20I, M36I, N37K, R41K, H69K, K70R, P79PA, L89M G16*E 
IRL07975 IRL07975 None    I13V, K14R, K20I, E35K, M36I, N37D, R41K, H69K, L89M  
IRL08974 IRL08974 None    L10I, I13V, E35D, M36I, R41K, C67G, H69K, L89M  
IRL09086 IRL09086 None    I13V, K14R, E35D, M36I, N37D, R41K, R57K, H69K, L89M  
IRL09405 IRL09405 None    I13V, K14R, K20I, M36I, P39PL, R41K, L63LP, I64IM, H69K, L89M Y59YCNS 
IRL10565 IRL10565 None    L10I, I13IM, E35D, M36I, R41K, R57K, I62V, L63T, E65D, H69K, T74S, L89M  
IRL10794 IRL10794 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M G52GS, G68GR 
IRL11685 IRL11685 None    I13V, K14R, G16E, K20I, E35ED, M36MI, P39PL, R41K, Q61H, H69K, K70KR, I72IT, L89M  
IRL11696 IRL11696 None    I13V, E35D, M36I, R41K, K45R, H69K, L89M  
IRL12077 IRL12077 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
IRL12832 IRL12832 None    Q7QH, I13V, K14KT, Q18QH, R41K, L63S, I64V, K70KR, V77I D25DY, L38LCFW, G40GR, W42W*, P44PS, K45K*, G52GC 
IRL12973 IRL12973 None    V11VF, E35D, M36I, R41K, L63LP, H69K, L89M, I93L  
IRL13510 IRL13510 None    I13V, K14R, M36I, R41K, H69K, L89M  
IRL13537 IRL13537 None    I13V, I15V, G16E, K20I, M36I, N37S, P39S, L63P, H69K, K70R, L89M  
IRL13563 IRL13563 None    T12A, I13V, K14R, G16E, Q18QK, K20I, M36I, N37ND, R41K, I62IT, E65ED, H69KT, I72IV, L89M  
IRL14285 IRL14285 None    L10I, I13V, K14R, G16E, K20R, E35D, M36I, N37ND, R41K, H69KQ, L89M  
IRL14463 IRL14463 None    I13V, K20KR, E35D, M36I, R41K, R57RK, I62V, L63T, H69K, T74S, L89M R87RI 
IRL14552 IRL14552 None    I13V, K14R, I15IV, G16GE, K20KR, E35D, M36I, P39PQ, R41K, R57K, H69K, L89M  
IRL14593 IRL14593 None    I13V, R41K, D60DE, L63P, H69HY, K70KR, V77VI  
IRL14981 IRL14981 None   V11I I13V, K14R, K20I, M36L, N37S, R41K, L63P, H69K, L89I  
IRL15038 IRL15038 None    L10I, T12TP, I13V, G16A, E35D, M36I, R41K, R57RK, H69K, L89M  
IRL15052 IRL15052 None   L33LF L10LV, I13V, K14R, L19P, K20I, E35EDHQ, M36I, R41K, K43KR, K45KN, Y59YF, Q61QH, I62IL, H69K, L89M P9PT, W42WCS, P44PQ, G52GS, V56VL, R57RIS, Q58Q*, D60DEHQ, E65EA, V75VL, N98NY 
IRL15796 IRL15796 None    I15V, G17D, K20R, E35D, M36I, N37D, R41K, R57K, L63T, E65D, I72T, L89M  
IRL16047 IRL16047 None   L89MV I13V, G16A, K20R, E35D, M36MI, N37D, L38LIM, R41EK, K55KT, C67CY, H69K, K70KR, I72IL, P79PL, I93IM W42WS, I62IR, L76L*, G78GDE 
IRL16863 IRL16863 None    Q18QK, E35D, M36V, R41K, H69K, L89M  
IRL17304 IRL17304 None    I13V, K14R, G16GE, E35D, M36I, R41K, R57K, H69K, L89M  
IRL17582 IRL17582 None    I13A, K20I, M36I, R41K, H69K, K70R, L89M  
IRL17724 IRL17724 None    I13V, K14R, I15V, K20I, M36I, R41K, R57K, I62V, L63P, C67E, H69K, V82I, L89M E35*Q, P44PL 
IRL17746 IRL17746 None    I13V, K14KE, E35D, M36I, R41K, H69K, L89M  
IRL17894 IRL17894 None    T12TP, I13V, K14R, G16E, N37NS, R41K, L63H, I64V  
IRL18332 IRL18332 None    I13V, K14R, L19LV, K20I, M36I, R41K, I64V, H69K, I72M, V82VI, L89M I15IF, Q18QKPT 
IRL18404 IRL18404 None    L10LM, I13V, K14R, K20I, E35Q, M36I, N37E, R41K, R57RK, I62IV, L63S, C67E, H69K, V82I, L89M  
IRL18754 IRL18754 None    I13V, K20I, M36I, R41K, I64V, H69K, L89M P44PL 
IRL18888 IRL18888 None   K43T I13V, K14R, K20I, E35K, M36V, R41K, H69K, L89M D25DY 
IRL19039 IRL19039 None    I13V, I15L, L19LI, K20I, M36I, L38I, R41K, I62IV, I64L, E65D, H69K, L89M  
IRL20203 IRL20203 None    G17GDE, L19IT, M36IL, N37D, R41K, I62IV, L63P, I64L, A71AT, I72V, I93IL  
IRL22469 IRL22469 None    I13V, G16GA, E35D, M36I, R41K, H69K, L89M  
IRL23671 IRL23671 None   V11VI I13V, I15L, K20I, M36I, R41K, L63LP, H69K, K70R, L89M  
IRL24786 IRL24786 None    I13V, K14R, G16E, K20I, M36I, R41K, K43R, H69K, L89M  
IRL25181 IRL25181 None    Q7QR, L10V, I13V, G16E, K20I, E35D, M36I, N37NY, R41K, K45KN, L63V, H69K, I85IM, L89M G78GA 
IRL25637 IRL25637 None   L10LF, L76LF I13A, K14R, G16GR, K20I, M36I, R41K, D60DY, L63P, H69K, K70KR, L89M, I93IM, N98ND L38LS, L97L* 
IRL26149 IRL26149 None    I13V, K14R, K20I, M36I, R41K, L63C, G68GE, H69K, L89M  
IRL27010 IRL27010 None    L10V, I15V, G16E, E35D, M36I, R41K, R57K, Q61QH, L63T, I72V, L89M Q7QELV, G40GV, E65DHY 
IRL27252 IRL27252 None    T12TS, I13V, K14R, I15V, G17E, K20I, M36I, R41K, K45KR, I64M, H69K, K70KR, L89M  
IRL27388 IRL27388 None    I13V, K14R, L19P, K20I, E34EA, E35G, M36I, L38LI, R41K, L63LP, H69K, K70KR, L89M  
IRL27860 IRL27860 None    I13V, K14R, K20R, E35ED, M36I, R41K, H69K, L89M  
IRL27862 IRL27862 None    I13V, K20R, M36I, N37S, R41RK, H69K, L89M, I93L  
IRL28471 IRL28471 None    W6WL, L10I, I13V, L33V, N37ST, P39S, R41K, L63FI, I64V, C67G R57RT 
IRL28857 IRL28857 None    K14KEGR, E35D, M36I, R41K, K55KT, H69K, K70KR, L89M I13GV 
IRL29133 IRL29133 None    L10I, T12K, I13V, K20I, E34A, M36I, N37D, R41K, L63LP, C67H, H69N, L89IM  
IRL30776 IRL30776 None    I13V, K20I, M36I, R41K, L63P, H69K, L89M  
IRL31485 IRL31485 None    L10I, I13V, K14R, G16E, K20I, M36I, N37S, R41K, H69Q, I72T, L89M  
IRL32818 IRL32818 None    L10I, I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
IRL32980 IRL32980 None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69Q, A71T  
IRL32981 IRL32981 None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, H69Q, A71T  
IRL34458 IRL34458 None    H69Y  
IRL35416 IRL35416 None    I13V, K20R, E35D, M36I, N37D, R41K, H69K, L89M  
IRL35854 IRL35854 None    L10V, I13V, I15V, K20R, M36I, N37ND, R41RK, L63S, H69K, K70R, L89M  
IRL35870 IRL35870 None    L10LV, I15V, G16GE, K20R, E35D, M36I, R41K, R57K, L63T, E65D, H69HY, I72T, L89M  
IRL35871 IRL35871 None    I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, H69Y, I72T, L89M  
IRL37602 IRL37602 None    I13IV, K14R, E35D, M36I, N37D, R41K, H69K, K70R, L89M, I93IL R8RG 
IRL38424 IRL38424 None    I13V, K14R, I15V, E35ED, N37NCSY, R41K, I62V, L63P, H69K, L89M M36ILST 
IRL39082 IRL39082 None    I13V, K20R, M36I, L38LW, H69K, L89M D25DV, R41IKM, W42W* 
IRL39239 IRL39239 None    T12K, I13V, K14R, K20I, M36I, N37E, P39Q, L63P, H69K, L89M  
IRL39248 IRL39248 None    L10V, I13V, K20R, M36I, R41K, L63S, H69K, K70R, L89M  
IRL39742 IRL39742 None    I13V, G16E, E35D, M36I, R41K, H69K, L89I, Q92R  
IRL39771 IRL39771 None    I13V, I15V, E35D, M36I, N37E, R41K, R57K, H69K, L89M  
IRL40236 IRL40236 None    I13V, G16E, E35D, M36I, R41K, I62V, H69K, L89M  
IRL41649 IRL41649 None    L10I, T12TA, I13AV, L19P, K20I, M36I, R41K, K43R, L63P, C67Y, H69K, K70R, L89M  
IRL46503 IRL46503 None    I13V, G16E, L19LI, K20I, E35D, M36I, R41K, K43R, H69K, L89M  
IRL46667 IRL46667 None  L76LGRV  T12P, I13V, L19Q, E35D, M36I, R41K, R57RG, D60DE, Q61QH, L63P, H69K, L89M G52GR, Y59Y*C, I62IR, I64IT, C67C*, G68GR, I85IFST, L97L* 
IRL49110 IRL49110 None    L10V, I13V, I15V, G16E, K20R, E35D, M36I, N37K, P39T, R41K, R57K, L63T, E65D, I72T, L89M  
IRL50192 IRL50192 None    I13V, I15V, G16E, K20I, M36I, N37S, P39S, L63P, I64L, H69K, K70R, L89M  
IRL51253 IRL51253 None    L10LV, I13V, G16E, K20I, M36I, N37K, R41K, H69K, K70KR, L89M  
IRL51516 IRL51516 None    I13V, K14R, E35D, M36I, R41K, H69K, V77I, L89M  
IRL52172 IRL52172 None    L10IV, I13V, E35D, M36I, R41K, R57RK, I62V, L63H, H69K, P79PS, L89M  
IRL53271 IRL53271 None    I13V, K14R, K20I, M36I, N37D, R41K, H69K, K70R, L89M  
IRL53474 IRL53474 None    I13V, L19P, K20I, M36I, R41K, Q61E, I64L, H69K, K70R, L89M  
IRL54561 IRL54561 None    L10V, T12A, I13V, G16E, K20I, E35D, M36I, R41K, L63V, H69K, L89M  
IRL54796 IRL54796 None    L10I, I13V, K14R, G16E, K20I, M36I, N37S, R41K, H69Q, I72T, L89M  
IRL56491 IRL56491 None    I13V, L19P, K20I, M36I, R41K, L63P, H69K, L89M  
IRL56766 IRL56766 None    I13V, G16E, K20I, E35D, M36I, R41K, K43R, R57K, I64V, H69K, K70R, L89M  
IRL57992 IRL57992 None    E35D, M36I, R41K, H69K, L89M  
IRL58673 IRL58673 None    I13V, G16E, K20R, E35D, M36I, R41K, H69K, L89M  
IRL58932 IRL58932 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64L, H69K, L89M  
IRL59045 IRL59045 None    I13V, K14R, I15V, G17E, K20I, E35Q, M36I, R41K, I64M, H69K, L89M  
IRL59962 IRL59962 None    I13V, G16E, K20I, M36I, P39PT, R41K, I62K, H69K, L89M  
IRL61072 IRL61072 None    I13V, G16A, E35D, M36I, R41K, R57K, Q61E, H69K, K70R, L89M  
IRL61894 IRL61894 None    I13V, G16E, K20I, M36I, R41K, Q61H, H69K, K70R, I72T, L89M  
IRL67643 IRL67643 None  M46MI  I13V, K14R, E35D, M36I, R41K, R57RK, H69K, V77I, L89M, I93L  
IRL71517 IRL71517 None    K14S, K20R, E35D, M36I, R41K, R57K, I62V, L63T, I64M, E65D, I72V, L89M  

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