<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Youngpairoj (2012)
Title Prevalence of drug resistance-related polymorphisms in treatment-naive individuals infected with nonsubtype B HIV type 1 in Cameroon.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 57
NumPts 57
Subtype CRF02_AG, A, F, CRF11_cpx, D, CRF18_cpx

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
cm1067 cm1067 None None   P4S, V35T, E36D, T39L, S162A, F171Y, K173T, D177E, T200A, Q207E, R211K, V245Q, Y271F, K281S, T286A, E291D, V292I, I293V, P294T, L295M, S322T, I326V, G335D, R356K, M357R, G359S, A371V, I375V, A376S, T386I, K390R, A400T, T403M, E432D  
cm1079 cm1079 None None  G190E V35T, D123N, I135V, S162A, K173A, Q174T, D177E, V179I, T200A, Q207K, P243T, V245K, T286A, E291D, V292I, I293V, S322A, I326V, G335D, R356K, M357K, G359S, T369V, A371I, I375V, K390R, E399K, T403L, E432D, V435I E302K, E370K, E378K 
cm1089 cm1089 None None   D17N, K32R, V35T, E36D, T39K, V60I, D123E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, P243S, V245Q, E248N, T286A, E291D, V292I, I293V, S322T, G335D, R356K, M357R, G359S, A371V, I375V, T377L, K390R, K395R, T403M G273R 
cm1090 cm1090 None None   K11T, V35T, E36A, T39K, K43E, K122E, D123S, I135T, S162C, K173S, D177E, V179I, T200I, Q207A, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, E312D, I326V, G335D, M357K, G359S, K366R, T369V, A371V, I375V, A400T, T403M, W410Y, N418S, E432D  
cm10bb cm10bb None None   K11A, V35M, T39K, D121Y, K122E, D123G, E169D, K173A, Q174K, D177E, G196E, Q207A, R211S, V241I, V245Q, E248N, D250E, A272S, T286A, E291D, V292I, I293V, E312D, G335D, M357K, R358G, G359S, E370Q, A371V, I375V, S379G, T403M, E432D, V435I  
cm1154 cm1154 None None   V35T, K122E, D123N, I135V, S162A, K173T, Q174K, D177K, I178M, Q197E, T200E, E203Q, Q207E, V245K, V276I, T286A, I293V, P294T, S322A, G335D, R356K, M357K, G359S, A371V, K374R, I375V, K390R, T403M, E432D, V435I  
cm1177 cm1177 None None   V21I, V35I, S48E, V90I, K104R, I135V, S162A, K173T, Q174E, D177E, T200A, Q207E, R211K, V245Q, V276I, K277R, T286A, A288T, E291D, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, T403M  
cm11bb cm11bb None None   V35T, E36D, V60I, D123N, I135V, S162A, K173T, Q174K, D177E, Q207E, R211K, V245Q, D250N, T286A, V292I, I293V, P294T, L295M, L310I, S322T, I326V, Q334P, G335D, R356K, M357R, G359S, A371V, K390R, T403M, E432D, G436E  
cm12bb cm12bb None None   V35T, S48T, V60I, I135V, S162A, K173T, Q174G, D177E, G196E, T200A, R211K, V245Q, D250E, K277R, T286A, E291D, V292I, I293V, S322A, I326V, G335D, R356K, M357K, G359S, K366R, A371V, I375V, K390R, K395R, T403M, E432D, V435A  
cm1490 cm1490 None None   K20R, V35T, V60I, I135V, S162A, E169A, K173A, Q174K, D177E, T200A, Q207E, R211K, V245K, T286A, E291D, V292I, P294T, S322A, I326V, G335D, R356K, M357K, R358K, G359S, K390R, T403M, E432D  
cm1499 cm1499 None None   I5V, E6D, P14A, V35T, K49R, V118I, K122G, D123N, K173T, D177E, T200E, I202V, Q207E, F214L, V245Q, E248D, D250E, S251C, A272P, V276I, K277R, E291D, V292I, I293V, E297A, V317A, I329V, Q334L, G335D, R356K, M357R, G359T, K366R, A371V, A376C, T377L, S379A, K390R, K395R, A400T, E404D, K431R, V435L Y427N 
cm14bb cm14bb None None   V35T, E36D, K43N, D123E, I135V, S162A, K173A, Q174K, D177E, G196E, T200A, Q207G, F214L, V245Q, E248T, T286A, E291D, V292I, I293V, E308K, S322E, I326V, G335D, R356K, M357K, G359S, T369V, A371V, I375V, S379G, K390R, T403M, E432D  
cm1500 cm1500 None None   V35T, I135V, S162A, K173T, Q174R, D177E, T200A, Q207E, V245K, K277R, K281R, T286A, E291D, V292I, I293V, P294T, S322A, I326V, R356K, M357K, G359S, A371V, I375V, K390R, T403L, T409S  
cm1501 cm1501 None None   V35T, E36D, T39A, K122E, D123S, I135V, S162A, K173T, D177G, T200A, Q207G, R211K, V245Q, T286A, E291D, V292I, I293V, S322A, D324E, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, K395R, T403M, E432D, V435A  
cm1502 cm1502 None None   V35T, T39L, K104R, K173A, Q174K, D177E, Q207E, R211K, P243A, V245Q, E248D, D250S, A272P, K281R, T286A, E291D, I293V, E297A, L303M, Q334H, G335D, F346H, R356K, M357R, G359T, A371V, S379G, T386V, K390R, A400T, K431T, V435L  
cm1555 cm1555 None None   V35T, E36D, T39A, K104R, D121A, K122E, I135V, I142V, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, D250E, T286A, A288G, E291D, V292I, I293V, P294T, S322A, R356K, M357K, G359S, A371V, I375V, K390R, A400T, T403M, E432D  
cm1567 cm1567 None None   V35T, E36D, E40D, V90I, K104R, K122E, D123G, S162A, K173I, Q174K, D177E, I178M, I180V, T200A, Q207E, V245Q, E248D, V276I, T286A, E291D, V292I, I293V, P294T, S322G, I326V, R356K, M357R, R358K, G359S, T369A, I375V, A400T, T403Q, V435A  
cm1601 cm1601 None None   V35T, E36D, T39L, K104R, I135V, S162A, K173T, Q174K, D177E, T200A, Q207G, R211K, V245Q, T286A, E291D, V292I, I293V, S322A, I326V, I329V, G335D, R356K, M357K, G359S, T369A, A371V, I375V, K390R, T403M, E432D  
cm1609 cm1609 None None   K11E, V35T, D121Y, K122E, D123G, S162A, K173T, Q174K, D177E, G196E, T200A, Q207A, R211S, V245Q, E248D, K281R, E291D, V292I, I293V, S322A, I326V, G335D, R356K, M357R, G359S, I375V, T377V, T386I, A400T, T403M, E432D, V435A  
cm160bb cm160bb None None   V35T, K122E, D123G, I135R, S162A, K173T, Q174D, D177E, T200A, E204K, Q207E, F214L, V245Q, A272P, V276T, T286A, E291D, V292I, I293V, S322A, D324E, R356K, G359S, T369V, A371V, I375V, K390R, T403L, K431R, E432D, V435I  
cm161bb cm161bb None None   V10A, K11T, V35T, T39N, D121H, K122E, I142V, K166R, E169D, K173T, Q174R, D177E, V179I, V189I, G196E, Q207A, R211S, V245M, E248D, D250A, A272P, K277R, T286A, I293V, E297A, M357K, G359S, V365I, A371V, I375V, S379G, A400T, E432D, V435I  
cm1633 cm1633 None None   V35T, I135V, S162A, K173T, D177E, T200A, Q207E, R211K, K223R, V245K, K277R, T286A, E291D, V292I, I293V, S322T, I326V, G335D, I341V, R356K, M357K, G359S, K366R, A371V, I375V, A376V, T386A, K390R, T403M, E432D  
cm1636 cm1636 None None   V35T, E36D, T39S, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, P243H, V245Q, A272T, V292I, I293V, S322T, I326V, G335D, T338S, R356K, M357K, G359S, K366R, T369A, A371V, I375V, K390R, K395R, T403M  
cm1642 cm1642 None None   V35T, E36D, V60I, I135V, S162A, K173A, Q174K, D177E, I178M, T200I, Q207N, P243T, V245Q, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357R, R358K, G359S, A371V, I375V, A376S, T386I, K390R, E399D, T403M, E432D  
cm1644 cm1644 None None   V35T, E36D, T39L, I135V, S162A, K173T, Q174E, D177E, I178M, T200A, Q207E, P243Q, V245Q, T286A, E291D, V292I, I293V, S322T, G335D, R356K, M357R, G359T, A371V, I375V, K390R, K395R, T403M, E432D, A437V  
cm1647 cm1647 None None   P14S, V35T, T39L, I50V, S68G, I135V, S162A, K173T, Q174K, D177E, I178M, V179I, T200A, Q207E, V245Q, E248D, K281R, T286A, E291D, V292I, I293V, P294T, E312D, S322A, I326V, G335D, R356K, M357R, G359S, T369V, A371V, I375V, A376T, K390R, T403M, E432D, V435E, E438K  
cm1649 cm1649 None None   V35T, G45E, D123E, S162C, K173A, Q174K, D177E, E194K, T200A, R206K, Q207E, R211K, V245Q, D250E, S251N, V261I, K275R, T286A, E291D, V292I, I293V, P294T, E297K, L303M, E312K, S322A, G335D, M357R, G359S, S379G, G384E, T386V, K390R, A400T, E430K, K431T, V435A E413K 
cm1657 cm1657 None None   K11T, V35T, T39K, K43E, D121H, K122E, S162C, E169D, K173A, Q174K, D177E, I178L, G196E, Q207N, R211K, V245Q, T286V, E291D, I293V, P294T, E312D, E328K, G335D, M357R, G359S, K366R, A371V, I375V, T403M, E404D, E432D, V435A  
cm1660 cm1660 None None   V35T, K49R, K122P, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, P243H, V245E, E248D, T286A, E291D, V292I, I293V, P294T, K311R, S322T, I326V, Q332H, G335D, R356K, M357K, R358K, G359S, A371V, I375V, A376T, K390R, T403M, E432D, V435M  
cm1668 cm1668 None None   V35T, T39L, K43R, I135V, S162A, K173T, Q174K, D177E, Q207E, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359T, K366R, A371V, I375V, K390R, K395R, T403M, E432D  
cm1672 cm1672 None None   E6K, K11A, K20R, V35T, E36D, T39M, D121Y, K122E, D123G, E169D, K173A, Q174K, D177E, G196E, Q207A, R211S, V245Q, E248D, T286A, E291D, I293V, P294T, E312D, Q334P, G335D, M357K, G359S, E370A, I375V, T403M, E432D, V435A Q258P, E430A 
cm1680 cm1680 None None   K11T, V35T, D121H, K122E, D123S, I135V, S162A, K173G, Q174K, D177E, T200E, Q207E, R211K, V245Q, E248D, K277R, T286A, E291D, V292I, I293V, S322T, G335D, R356K, M357K, G359S, A371V, I375V, S379G, V381I, K388R, K390R, T403M, E432D, V435I  
cm1778 cm1778 None None  V179E K20R, V35T, T39A, E40D, D123N, S162A, K173T, Q174K, D177E, T200A, Q207E, F214L, V245Q, T286A, E291D, V292I, I293V, P294T, E312Q, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375A, T377I, K390R, A400T, T403M, E432D, V435A  
cm182bb cm182bb None None   P4H, V21I, V35T, T39G, K49R, I135T, S162C, R172K, D177E, I178L, E204N, Q207E, R211K, F214L, V245T, E248N, K249Q, D250E, A272P, K277R, T286A, E297K, G333E, Q334A, G335C, Y339W, R356K, M357V, Q373H, K374R, K390R, T403K, K431T, V435I Q182S 
cm18bb cm18bb None None   V35T, E36D, T39S, E40D, K49R, V90I, K122E, D123S, S162A, K173T, Q174K, D177E, T200A, Q207E, V245K, E248D, D250E, S251N, K281R, T286A, E291D, V292I, I293V, P294T, E297K, A304E, S322A, G335D, R356K, M357R, G359S, T369A, A371V, I375A, K390R, K395R, T403M, E432D  
cm1960 cm1960 None None   V35T, G112E, I135V, S162A, K173T, Q174R, D177E, I178M, T200A, Q207E, R211K, P243T, V245E, V276I, T286A, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357K, G359S, A371V, I375V, A376T, T377M, K390R, T403L, E432D, V435I  
cm1bb cm1bb None None   V35T, K122E, D123N, I135V, S162A, K173I, Q174K, D177E, T200A, Q207E, R211K, V245Q, K277R, K281R, T286A, A288T, E291D, I293V, P294T, S322T, I326V, G335D, R356K, M357K, R358K, G359S, H361L, K366N, A371V, I375V, K390R, K395N, T397S, T403L, V435G  
cm2bb cm2bb None None   E6D, V8G, V35T, T39K, K122E, D123G, K173L, Q174K, D177E, Q207A, R211K, V245Q, K281R, T286A, E291D, I293V, E312N, Q334L, R356K, M357K, G359S, A360T, K366R, T369V, A371T, Q373H, I375V, K390R, E399D, A400T, T403M, E413D, E432D, V435I  
cm3058 cm3058 None None   V35T, T39L, K122E, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, E297D, S322T, G335D, R356K, M357K, G359S, A371V, I375A, K390R, K395R, T403M, E432D, V435I  
cm3072 cm3072 None None   V35T, E40D, V60I, K64R, K122P, I135V, S162A, K173T, Q174K, D177E, R211K, F214L, V245T, A272P, T286A, E291D, V292I, I293V, E297T, E312D, Q334H, G335D, R356K, M357R, G359T, T369V, A371V, I375V, A376S, T377I, K390R, A400T, T403V, E404D, P421H, W426R, K431T V8E 
cm3081 cm3081 None None   V35T, K43E, K49R, W88C, I135V, S162A, K173T, Q174K, D177E, T200E, E203Q, Q207E, V245E, T286A, E291D, V292I, I293V, R307K, S322A, I326V, G335D, F346Y, R356K, M357K, G359S, A371V, I375V, K390R, T403L, V435I  
cm3086 cm3086 None None   V35T, D123E, I142V, A158S, K173A, Q174K, D177E, Q207A, R211S, V245Q, T286A, E291D, I293V, E312D, S322T, I326V, G335D, R356K, M357K, G359S, T386I, K390R, A400T, E432D, V435I  
cm33bb cm33bb None None   K32R, V35T, E36D, T39L, V118I, E138A, S162A, F171Y, K173T, Q174K, D177E, I178M, T200A, I202V, Q207E, F214L, P243H, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357K, G359S, A371V, Q373L, I375V, A376S, K390R, K395R, E432D, V435A, A437V  
cm408 cm408 None None   V35T, E36D, T39L, V60I, D123E, I135L, S162A, K173A, Q174T, D177E, T200A, Q207E, V245Q, T286A, E291D, V292T, I293V, P294A, S322T, I326V, G335D, R356K, M357K, G359S, A360T, A371V, I375V, T377I, K390R, T403M, P421S, E432D  
cm420 cm420 None None   V35T, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, D237A, Q242H, V245K, E248K, D250N, N255K, A272P, K277N, L282P, T286A, V292T, I293V, P294I, V314A, H315R, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, A376S, K390R, K395R, T403M, E413D, E432D W239G, V241G, V254A, V261W, W266G, A267P, L279R, T290P, E300N, E302K 
cm46bb cm46bb None None   V35T, K49R, K122E, I135V, Q145R, S162A, K173I, Q174K, D177E, T200A, Q207E, V245K, T286A, E291D, V292I, I293V, P294T, E312D, S322A, I326V, G335D, R356K, M357R, R358K, G359S, A371V, I375V, T377L, T386S, K390R, T403M, E432D, V435I  
cm49bb cm49bb None None   E6D, K11Q, V35T, K122E, D123N, K173T, D177E, T200E, I202V, Q207S, R211K, F214L, P243T, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297A, I326V, I329V, G335D, R356K, M357R, G359T, K366R, T369A, A371V, V372I, A376T, T386P, K390R, K395R, A400T, E404D, V435I  
cm4bb cm4bb None None   P4T, V35T, E36D, T39E, S48T, K49R, K104R, K122E, D123G, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, R211T, V245Q, T286A, E291D, V292I, I293V, S322A, I326V, G335D, R356K, M357K, G359S, A371V, I375V, K390R, A400T, T403L, E432D, V435I  
cm57bb cm57bb None None   V35T, E36D, T39L, K122E, D123S, S162A, K173T, Q174K, D177E, T200A, Q207E, P243T, V245Q, S251N, T286A, E291D, V292I, I293V, S322T, I326V, G335D, R356K, M357R, G359S, A360T, A371V, I375V, A376S, T386S, T403L, E432D, V435L  
cm63bb cm63bb None None   V35T, T39R, V60I, K122P, I142V, K173A, Q174K, D177E, T200V, Q207E, V245N, A272P, V276I, T286A, E291D, V292I, I293V, E297A, E312D, G335D, R356K, M357R, R358K, G359S, T369V, A371V, I375A, T377M, K390R, E396G, A400T, E404D, P421H, K431T T397N 
cm70bb cm70bb None None   V35T, E36D, K49R, V60I, V90I, K104R, D123E, S162A, K173T, Q174K, D177E, T200A, Q207E, P243S, V245Q, T286A, E291D, V292I, I293V, P294T, S322A, G335D, R356K, M357K, G359S, K366R, T369A, A371V, I375V, K390R, K395R, A400T, E432D, V435L  
cm7bb cm7bb None None   V35T, E36D, T39A, K122E, D123N, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, K275Q, V276I, T286A, V292I, I293V, S322A, I326V, Q334P, G335D, R356K, M357R, G359S, A371V, I375V, K390R, E396D, A400T, T403I, E432D, V435M T165R 
cm885 cm885 None None   V35T, I135V, S162A, K173I, Q174K, D177E, T200E, E203Q, Q207E, V245K, A272P, K277R, T286A, V292I, I293V, P294A, S322A, G335D, R356K, M357K, G359S, T369A, I375V, T377L, K390R, K395R, T403M, E432D, V435I  
cm89bb cm89bb None None   V35T, V60I, I135V, E138G, S162A, K173T, Q174K, D177E, I178M, T200E, E203Q, Q207E, V245L, T286A, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, R358K, G359S, A371V, I375V, A376T, K390R, T403M, E432D, V435I  
cm8bb cm8bb None None   E6N, V8I, K11T, V35T, E40D, V118I, D121H, K122E, D123S, I142V, F171Y, K173S, D177E, I202V, Q207A, R211S, F214L, V245Q, E248D, K275Q, V276I, R284K, T286A, V292I, I293V, P294T, L295M, E297Q, E312N, S322T, M357K, G359S, T369A, A371V, I375A, K390R, A400L, E432D, V435L  
cm925 cm925 None None   V35T, E36D, T39L, K122E, D123E, I135V, S162A, K173T, Q174K, D177E, T200A, Q207N, V245E, S251C, A272P, T286A, E291D, V292I, I293V, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, S379G, T403M, E432D  
cm9bb cm9bb None None   V10A, V35T, V90I, I135V, S162A, F171Y, K173T, Q174K, D177E, I178M, T200A, Q207E, P243H, V245Q, A272P, K275R, K277R, Q278H, T286A, E291D, V292I, I293V, P294S, E297A, L303M, Q334H, G335D, F346H, R356K, M357R, G359S, A371V, S379G, T386V, K390R, A400T, K431T, V435L  

Database

Resources

Team