<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Fernandez-Garcia (2012)
Title The analysis of near full-length genome sequences of HIV-1 subtype A viruses from Russia supports the monophyly of major intrasubtype clusters.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 10
NumPts 10
Subtype A

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
Irkutsk_5 Irkutsk_5 None None A62V  K11T, V35I, T39E, K122E, D123N, I135T, A158S, K166R, K173L, Q174R, D177E, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, V381I, K390R, V435A, L452M, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554Q, K558R I382~, W383~, G384~, K385~, T386~, P387~, K388~, F389~ 
RU01029 RU01029 None None A62V  K11T, V35I, E36D, T39K, V90I, K122E, D123S, A158S, K173L, Q174K, D177E, R199RT, Q207A, R211S, E224EG, V245M, E248D, A272P, K277R, T286A, A288AT, E291D, V292I, I293MV, P294T, R307RK, E312EK, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, V381I, K390R, T403M, L452I, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554Y, K558R G384R 
RUA001 RUA001 None None A62V  K11T, V35I, E36D, T39K, T69S, D123N, A158S, K173V, Q174K, D177E, Q207A, R211S, V245T, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E300EK, I326V, E328EK, Q334L, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, K390R, V435I, L452I, D471E, Q480H, L491S, K512R, E516EK, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554Y, K558R  
RUA007 RUA007 None None A62V  K11T, V35I, E36D, T39K, K122E, D123S, R125K, A158S, K173L, Q174K, D177E, E194K, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, G335E, R356K, M357K, R358G, G359S, E370A, A371V, I375V, V381I, K390R, T403M, L452I, S468P, D471E, Q480H, L491S, K512R, E516K, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554K, K558R  
RU_560_1125 RU_560_1125 None None A62V  K11T, V35I, E36D, T39K, K82KR, K122E, D123S, I135T, A158S, K173L, Q174K, D177E, Q207A, R211S, V245T, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, V381I, K390R, T397V, T403M, L452K, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554Y, K558R  
RU_915_1016 RU_915_1016 None None   K11T, V35T, E36D, T39N, D121DN, K122E, D123S, R125RK, I135V, T165I, R172RK, K173L, Q174K, D177E, Q207A, R211S, V245T, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, K390R, T403M, L452M, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520N, Q524K, K527E, K530R, A534S, A554N, K558R R143RK 
RU_915_1035 RU_915_1035 None None   K11AT, V35T, T39R, K122E, D123S, S162A, K173S, Q174K, D177E, E194K, Q207A, R211S, V245M, E248D, A272P, T286A, E291D, V292I, I293V, P294T, V317A, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, K390R, T403M, L452I, D471E, Q480H, L491S, K512R, E516EK, L517I, S519N, Q520K, Q524K, K527E, A534S, A554N, K558R  
RU_915_1038 RU_915_1038 None None   K11T, V35T, E36D, T39KN, K122E, D123S, A158S, S162A, K173S, Q174K, D177E, Q207T, R211K, V245M, E248D, A272P, T286A, E291D, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, K390R, T403M, L452I, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554S, K558R  
RU_915_1041 RU_915_1041 None None   K11T, V35T, E36D, T39N, K122E, D123S, R125RK, I135T, S162C, E169K, K173L, Q174K, D177E, E194EK, R199RK, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, S322L, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, T386I, K390R, T403M, L452I, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q524K, K527E, K530R, A534S, A554H, K558R R143K, Q520EG 
RU_SP_B_049 RU_SP_B_049 None None   V10I, V35T, E36D, T39N, K122E, D123S, A158S, K173L, Q174K, D177E, Q207A, R211S, V245M, E248D, A272P, T286A, E291D, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, K390R, T403M, L452I, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554Y, K558R  

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