Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Charpentier (2011)
Title Virological response and resistance profiles after 18 to 30 months of first- or second-/third-line antiretroviral treatment: A cross-sectional evaluation in HIV type 1-infected children living in the Central African Republic.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 69
NumPts 69
Subtype J, CRF01_AE, CRF45_cpx, A, G, G + J, CRF02_AG, CRF18_cpx, D, F, H, CRF13_cpx, C


Clinical PR Isolates

106 CP001869 None    E35D, M36I, R41K, I62IV, L63ST, H69K, I72IT, L89M  
11 CP001554 None    I13V, L19LI, E35D, M36I, R41K, L63P, H69K, I72IV, L89M  
116 CP001097 None    I13V, K14R, G16A, M36I, N37D, D60E, Q61D, L63A, C67E, H69K, I72V, V77I, V82VI, L89I  
117 CP001201 None    M36I, R41K, I62V, L63H, H69K, K70KR, L89M  
118 CP001234 None    L10I, I13V, I15IL, L19I, E35D, M36I, R41K, L63T, H69K, L89M  
12 CP001765 None    T12S, L19I, M36I, R41K, L63A, H69K, T74S, L89M, I93L  
121 CP001724 None    I15IV, K20R, E35D, M36I, N37D, R41K, R57K, Y59YH, L63A, H69K, K70R, L89M  
125 CP001949 None    T12N, I13V, I15V, L19I, K20I, E35D, M36I, R41K, L63P, C67S, H69K, K70KR, V75I, V82I, L89M  
126 CP001955 None    I13V, G16A, M36I, R57K, D60E, Q61D, L63T, C67E, H69K, K70E, I72K, V77I, L89M  
128 CP0011161 None    L10V, I13V, G16E, E35D, M36I, P39PS, R41K, H69K, L89M  
13 CP001980 None    L10V, I15V, G16A, M36I, N37D, D60E, Q61E, L63A, C67E, H69K, V77I  
131 CP001146 None   G48GE I13V, K14R, I15V, G16E, E35D, M36I, N37D, P39PL, R41K, K43KI, L63LV, H69K, I72IR, L89M D29DE, G40GR, G51GR 
133 CP001227 None    L10I, I13V, E35D, M36I, R41K, L63T, I66IM, H69K, P79PH, L89M W42WR 
134 CP001307 None   V11I T12E, I13V, L19I, K20I, E35D, M36I, R41RK, L63P, C67S, H69K, V82I, L89I  
137 CP001812 None    L10LIV, I15V, G16A, E35D, M36I, N37D, D60E, Q61E, C67E, H69K, L89M, I93L  
146 CP001376 None    I13V, K14R, G17D, K20IM, E34K, M36I, P39T, R57K, D60E, Q61N, I62MT, L63S, C67E, H69K, I72T, V77I, L89M  
147 CP001498 None    I13V, L19IV, K20I, E35D, M36I, R41K, L63A, C67S, H69K, K70R, V77I, V82I, L89M  
148 CP001621b None    L10V, I13V, E35D, M36I, R41K, H69K, L89M  
149 CP0011145 None    L10IV, I13IV, K14R, G16A, M36I, N37D, D60E, Q61EG, I62V, L63IT, I64IM, C67E, H69K, K70KR, V82I, L89M  
15 CP0011158 None    L10I, T12K, I13V, G16E, L19Q, K20R, E35ED, M36I, N37NDEK, R57RK, D60E, Q61E, L63ST, C67E, H69K, K70R, I72K, L89IM  
156 CP001113 None    L10I, T12R, I13V, K14E, I15V, G16E, L19Q, N37D, D60E, Q61K, L63T, E65K, C67E, H69K, V77I, L89M  
157 CP001128 None    T12E, I13V, L19I, K20IL, E35K, M36I, N37D, R41K, K45R, L63P, C67S, H69K, V82I, L89M  
159 CP001446 None    I13V, G16A, K20KR, M36I, N37D, D60E, Q61N, L63T, I64L, C67E, H69K, K70KR, V77T, V82VI, L89M  
16 CP0011900 None    I13V, G16E, L19V, K20R, M36I, R41K, D60E, L63AT, E65D, H69K, L89M  
160 CP0011090 None    I15V, M36MI, R41K, L63A, H69Y, I72IT  
179 CP0011982 None    G16A, E35D, M36L, R41K, I62V, H69K, T74S, L89M  
18 CP0012151 None    G16E, E35D, M36I, R41K, L63T, H69K, K70R, I72T, L89M  
183 CP0011219 None    I13V, K14R, G17E, K20I, E34K, M36I, N37E, P39S, R41K, Q61N, I62M, C67E, H69K, K70R, I72V, V77I, L89M  
184 CP0011573 None    K14KR, E35D, M36I, N37D, R41K, R57K, L63AT, E65D, H69K, V77VI, L89M  
185 CP0011811 None    L10I, I15V, G16A, M36I, N37D, D60E, Q61E, L63V, C67E, H69K, L89M, I93L  
189 CP0012381 None    I3L, L10I, I15V, G16A, E35D, M36I, N37D, D60E, Q61E, I62V, L63T, C67E, H69K, K70R, V77I  
194 CP001026 None    L10V, I13V, K14NS, G16E, E35D, M36I, R41K, L63T, H69K, L89M  
195 CP001443 None    L10LI, I15V, G16A, E35D, M36I, N37NS, R57RK, D60E, Q61E, L63T, C67E, H69K, L89M  
197 CP001842 None    L10V, T12P, I13V, G16A, M36I, N37D, D60E, Q61K, L63T, C67E, H69R, I72T, V82I, L89M  
CP001-032 Unknown, LPV   L89V L10V, I13V, I15V, L19KR, K20I, E35G, M36I, N37ND, R41K, I62IV, L63P, H69K, K70N, A71T, T74TS  
20 CP001-477 Unknown, IDV  M46I, N88S  L10I, I15V, G16A, K20M, E35D, M36I, N37D, D60E, Q61E, I62V, L63S, C67E, H69K, K70R, I72V, T74A, L89M, I93L  
219 CP001004 None    I13V, E35D, M36I, R41K, K45R, I62V, L63P, G68E, H69R, L89M  
220 CP001040 None    L10V, T12A, I13V, K14R, G16A, E35D, M36I, N37D, D60E, Q61N, L63T, C67E, H69K, V77I, L89M I15AV 
225 CP001001 None    L10I, T12TA, I13V, G16A, E35D, M36L, N37D, D60DE, Q61EG, I62IV, L63AITV, C67E, H69K, T74K, L89M R41HKNQ 
227 CP001222 None    L10I, I13V, K14KR, G16A, E35D, N37DE, R41K, R57RK, D60E, Q61G, I62IV, L63I, C67E, H69K, V77T, V82VI, L89M  
23 CP0012052 None   V11I L10I, I13V, K20R, M36I, L63T, I64L, H69K, L89M  
232 CP0011420 None    L10M, I13V, M36I, R41K, K43KR, H69K, L89I  
233 CP0011781 None    I13V, I15V, L19I, K20I, E35D, M36I, N37D, R57RK, L63P, I64IL, C67S, H69K, K70R, V82I, L89M  
234 CP0012162 Unknown, LPV    I13V, L19M, K20I, E35K, M36I, N37DE, R41K, K45R, C67S, H69K, V82I, L89M  
CP001-039 Unknown  V82F, L90M  L10I, I13V, G16E, K20I, E35N, M36I, P39Q, R41K, R57RK, I62V, L63T, I64IL, H69K, I72T, T74S, L89M  
30 CP001399 None    I3V, L10I, I15V, M36I, N37D, H69K, L89M I13EV 
31 CP005026 None    E35D, M36I, R41K, H69K, L89M  
32 CP001-144 Unknown, LPV    I13V, K14R, G17E, K20I, E34K, M36I, N37D, L63T, I64M, H69K, K70KR, I72T, L89M P39M 
33 CP001621a None    L10V, I13V, E35D, M36I, R41K, H69K, L89M  
35 CP0012127 None    I13V, K14KR, K20I, E35D, M36I, N37ND, R41K, L63S, I64L, H69K, K70R, I72L, L89M  
37 CP0012457 None    T12N, I13V, I15IV, L19IT, K20I, E35Q, M36I, N37D, L63P, C67S, H69K, K70KR, V82I, L89M  
CP001-045 Unknown, IDV  L90M L33I L10V, I13V, L19F, K20T, E35D, M36I, R41K, R57K, L63P, H69K, T74S, L89I  
41 CP001480 None    I13V, E35D, M36I, R41K, H69K, L89M  
44 CP001899 None    L10LI, T12TAS, I13V, K14KR, I15IV, E35D, M36I, N37NT, R41RK, I62V, L63T, I64M, H69K, K70KR, L89M  
48 CP001264 None    L10LI, I13V, G16A, M36I, N37D, D60E, Q61E, L63A, C67EG, H69K, L89M, I93L  
49 CP001-745 Unknown    L10I, I13V, M36I, R41K, H69Q, L89M  
51 CP0012273 Unknown, LPV    T12P, I13V, G16E, K20R, E35D, M36I, R41K, L63T, E65EG, G68GE, H69KR, L89M K55K* 
58 CP001381 None    I13V, G17E, L19S, K20I, E35D, M36I, R41K, I62V, L63R, I64M, H69K, L89M K14K* 
CP001071 None    L10LIV, T12TAIV, I13IV, I15IV, G16GE, M36L, R41K, L63T, H69K, I72IT, L89M P1PS 
64 CP001-065 Unknown  L90M L89MV L10I, I13IV, K14R, G17GE, K20I, E34K, E35ED, M36I, N37D, Q61N, I62M, L63A, I64M, C67E, H69K, K70KR, A71V, V77I, I85IV, Q92QR, I93M  
67 CP001369 None    L10V, I13V, G16E, E35D, M36I, N37DE, R41K, L63Q, H69K, K70R, I72V, L89M  
68 CP001630 None    L10LV, T12TA, I13IMV, K14KR, I15IV, G16AE, E35D, M36I, N37D, R41K, D60DE, Q61QEGR, L63X, C67CDGY, H69K, K70KR, I72IATV, L89M  
69 CP001805 None    W6*, I13V, M36I, R41K, L63P, H69Y, I72V  
CP001141 None    L10I, T12TA, I13V, I15IV, M36I, D60E, Q61E, I62V, L63T, C67E, H69K, I72K, V77VI, V82VI, L89I G16AV 
77 CP0012322 None    L10V, I13V, I15IV, L19I, E35D, M36I, R41K, H69K, L89M  
CP001-259 Unknown, LPV    L10LI, K14KR, E35D, M36I, R41K, I62IV, L63AV, I64IL, H69K, K70KR, I72IV, L89M  
87 CP001368 None    L10I, K14KR, G16A, M36L, N37D, D60E, Q61E, I62IV, L63T, C67E, H69K  
CP001266 None    L10I, G16A, N37ND, R41I, D60K, Q61E, C67E, H69K, V77VI, L89M, I93L  
97 CP0012096 None    I13V, I15V, K20I, E35D, M36I, R41K, R57K, L63PS, I64M, L89M