<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Ajoge (2012)
Title Drug resistance pattern of HIV type 1 isolates sampled in 2007 from therapy-naive pregnant women in north-central Nigeria.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 28
NumPts 28
Subtype CRF02_AG, G, CRF06_cpx, F, C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
H06 HR06 None None   V35T, V60I, D121Y, K122E, K173T, Q174R, D177E, T200A, Q207D, V245Q, E248N, D250E, A272P, K281R, T286A, E291D, V292I, I293V, E297A, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, I375V, V381I, T386V, Q394R, A400V, K431T, V435L, F440Y R143K, T253A 
H08 HR08 None None   K20R, V35T, T39A, S48T, I50V, V60I, K104R, K122E, D123S, K173M, Q174K, D177E, T200A, K201I, Q207E, V245Q, D250E, S251N, T286A, E291D, V292I, I293V, E297K, D324E, Q334D, G335D, F346Y, R356K, M357R, R358G, G359S, T386V, Q394K, A400L, E404D, Y405H, K431T, V435A  
H09 HR09 None None   K20R, V35T, T39K, E40D, V60I, D86G, K104R, D123E, K173A, Q174K, D177E, I178V, T200V, Q207E, R211K, F214L, D218G, V245Q, E248D, D250E, A272P, Q278H, K281R, T286A, E291D, V292I, I293V, P294T, E297A, L301M, D324E, I329V, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, A371V, T377L, V381I, T386I, Q394R, A400I, K431T, V435I, E438D, F440Y  
H10 HR10 None None M184T  V35T, E40D, V60I, K122E, D123S, S162A, K173T, Q174E, D177E, T200A, Q207K, R211K, V245Q, E248D, A272P, K275Q, T286A, E291D, V292I, I293V, P294A, I326V, G335D, M357R, G359S, T369V, I375V, A376S, K390R, T403M, K431R, E432D, V435I  
H11 HR11 None None  V179E, Y181C K20R, V35T, T39E, V60I, I135K, K173I, Q174K, D177E, Q197H, T200A, Q207E, R211K, V245L, A272P, T286A, E291D, V292I, I293V, P294A, E297A, F346H, M357I, R358K, G359S, K366R, A371V, T377M, K388R, K390R, A400T, K431T, V435T  
H12 HR12 None None   V21I, V35T, E36D, K49R, V60I, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, V245M, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359S, A371V, I375V, A376S, V381I, K390R, T403M, E432D P217S 
H16 HR16 None None   P4T, V35T, E36D, K122P, I135T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, E248D, T286A, E291D, V292I, I293V, S322T, I326V, G335D, R356K, M357R, G359T, A371V, I375V, A376T, T377L, K390R, E399G, A400T, E432D  
H18 HR18 None None   V35I, E36D, T39A, S48E, E53D, T69S, I142V, S162A, K173T, D177E, I178M, T200A, Q207E, V245K, D250E, A272P, K277R, T286A, E291D, V292I, I293V, P321S, D324E, I329V, Q334P, G335N, F346Y, R356K, M357R, R358G, G359S, A371V, S379G, T386V, Q394R, E399D, A400V, K431T, V435P, F440Y  
H19 HR19 None None  K101E V35K, E36D, D123E, S162A, K173T, Q174K, D177E, T200A, Q207E, V245Q, A272P, V276T, K277R, Q278N, T286V, E291D, V292I, I293V, P294T, E297K, S322T, I326V, G335D, R356K, M357K, G359S, T369V, A371V, I375V, S379G, K390R, T403M, E432D, V435I I274M 
H22 HR22 None None   V35T, T39K, K43Q, V60I, S68G, P119S, I135V, I159V, D177E, T200A, Q207A, R211K, P243H, V245E, P247L, A272S, K281R, T286A, V292I, I293V, P294T, L295M, S322T, G335D, R356K, M357K, R358K, G359S, A371V, I375V, A376S, K390R, T403M, E432D, V435A L34S, I309T 
H24 HR24 None None   V35T, K49R, V60I, K122E, D123G, I135V, S162C, K173R, Q174K, D177E, I178M, T200V, Q207N, R211K, K223Q, V245K, E248D, D250E, A272P, T286A, E291D, V292I, I293V, S322T, I326V, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, Q394R, A400V, E413D, Q428R, K431T, V435P, F440Y  
H28 HR28 None None   K11N, V35T, K49R, D121H, K122E, I135V, S162A, T165I, E169N, K173A, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, P247A, Q278H, K281R, T286A, E291D, V292I, I293V, E297P, K323R, F346H, M357V, R358K, G359S, A376T, T377M, T386I, K390R, E399D, A400T, K431T, V435I  
H31 HR31 None None   V35T, T39M, K122E, D123T, S162D, K173T, Q174K, D177E, I178L, T200A, Q207E, V245Q, E248N, D250E, E291D, V292I, I293V, P294Q, A304E, D324E, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, S379G, T386V, K390R, Q394R, A400V, E404D, K431T, V435L, F440Y  
H32 HR32 None None   V21A, V35T, T39R, K43Q, D123E, K173A, Q174K, D177E, Q207E, P243A, V245Q, E248D, D250S, A272P, K275R, K277R, Q278H, K281R, T286A, E291D, I293V, E297A, L303M, D324E, Q334H, G335D, F346H, R356K, M357R, R358K, G359S, I375V, T377L, T386I, K390R, A400T, K431T, E432D, V435A  
H34 HR34 None None   V35T, T39M, V60I, S68G, D123G, I135T, S162A, K173A, Q174K, D177E, T200A, Q207D, R211K, F214L, V245Q, E248N, K249Q, A272P, V276I, T286A, V292I, I293V, P294T, S322T, G335D, R356K, M357R, R358K, G359S, T369A, A371V, I375V, A376I, T386A, K390R, A400T, T403M, E432D K122M 
H35 HR35 None None   V21I, V35T, K49R, V60I, K104R, K122E, D123N, E169D, K173T, Q174K, D177E, I178M, T200A, Q207E, R211Q, V245Q, E291D, V292I, I293V, P294T, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A376S, T386V, K390R, Q394R, A400V, K431T, V435L, F440Y  
H37 HR37 None None   V35M, T39A, E40D, W88C, A98S, K122E, I135V, S162A, K173A, Q174K, D177E, I178V, T200A, I202V, R211E, V245M, S251H, K275Q, V276T, T286A, E291D, V292I, I293V, P294T, S322T, I326V, R356K, M357K, G359S, T369A, A371V, I375A, A376S, K390R, A400T, E432D, V435D, G436E  
H42 HR42 None None   K20R, V35T, T39N, E40D, V60I, D121H, K122E, I135T, R172K, K173A, Q174K, G196E, T200A, E204D, Q207A, F214L, V245Q, E248D, D250E, S251E, A272P, V276I, Q278H, T286A, E291D, V292I, I293V, P294H, E297T, L301M, R307K, I326T, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A371L, A376S, T386I, Q394R, E396G, A400V, K431T, V435R, F440Y V365L 
H46 HR46 None None   V35T, V60I, A98S, D121H, K122E, I135T, K173A, Q174K, D177E, I178L, T200A, I202V, Q207D, R211K, V245K, S251V, A272P, E291D, V292I, I293V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, I375V, V381I, T386V, Q394K, A400V, K431T, V435S, E438D, F440Y  
H48 HR48 None None   V35T, T39R, K49R, D123E, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, P243H, V245E, E248D, Y271F, T286A, E291D, V292I, I293V, P294T, S322T, D324G, G335D, R356K, M357R, G359S, E370D, A371V, T377V, K390R, E404D, N418S, E432D I132T, N265D 
H49 HR49 None None   P4S, K20R, V35T, T39K, E40D, K43E, K104R, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, F214L, V245Q, E248D, D250E, S251N, A272P, Q278H, K281R, T286V, A288S, E291D, V292I, I293V, P294T, E297A, L301M, P321S, D324E, I329V, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, T369V, A371V, A376S, S379G, V381I, T386V, Q394R, A400V, E404D, K431T, V435L, F440Y  
H52 HR52 None None   V35T, V60I, K122E, D123S, I135V, A158S, K173T, Q174K, T200A, Q207D, R211K, I244V, V245Q, E248S, A272S, T286A, E291D, V292I, I293V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A371V, T386V, K390R, Q394R, E396D, A400V, E413D, Q428R, K431T, V435P, F440Y F130L 
H53 HR53 None None   V35T, D121H, K122E, I135V, I159V, K173T, Q174R, D177E, T200A, I202V, Q207E, R211K, V245Q, K249E, A272P, T286A, E291D, V292I, I293V, S322T, I326V, G335D, F346G, R356K, M357K, G359S, A371V, I375V, K390R, T403M, E413D, E432D, V435I  
H58 HR58 None None   V35T, E36A, T39E, E40D, S48T, D123S, K173T, Q174R, I178L, V179I, T200A, Q207E, R211K, V245Q, A272P, Q278N, T286A, E291D, V292I, I293V, K311R, Q334N, G335D, R356K, M357K, G359A, A376T, T377M, K390R, A400T, E404D, V417I, Y427C, E432D, V435I  
H60 HR60 None None   K20R, V35T, E36D, T39M, V60I, D123E, I135V, T139S, Q174E, D177E, I178M, T200A, E204R, Q207D, R211K, V245Q, D250E, S251N, A272S, K277R, T286A, A288S, E291D, V292I, S322T, I326V, G335D, I341V, R356K, M357R, G359S, A371V, I375V, V381I, K390R, T403M, E432D, I434L T253A 
H61 HR61 None None   V35T, E36D, V60I, K122E, D123S, I135T, S162A, K173M, Q174K, D177E, T200A, Q207E, F214L, V245Q, E248D, D250E, A272P, K277R, K281R, T286A, E291D, V292I, P294T, S322T, G335D, R356K, M357R, R358K, G359S, A371V, A376V, T386A, K390R, P392L, K395R, A400T, T403M, E432D, V435M  
H63 HR63 None None   I5V, V35T, E36D, V60I, K122E, I135V, S162A, K173A, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, E248D, A272S, V276I, R284K, T286A, E291D, V292I, I293V, P294T, L295M, L310I, S322T, G335D, R356K, M357R, G359S, T369V, A371V, I375A, S379C, K390R, T403M, E415G, E432D  
H66 HR66 None None   V35T, T39M, E53D, I135V, W153*, S162A, K173T, Q174A, D177E, I178V, T200A, Q207E, R211K, V245K, K263N, K275R, T286A, E291D, V292I, I293V, E305G, S322T, G335D, R356K, M357R, G359S, L368V, T369A, A371V, I375V, T377V, K390R, K395R, A400T, E432D, V435A M230T