<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Graf (2011)
Title HIV-1 genetic diversity and drug resistance among treatment naive patients from southern Brazil: An association of HIV-1 subtypes with exposure categories.
Citation J Clin Virol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 81
NumPts 81
Subtype C, B, F


Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
SC01 SC01 None    R20K, M50T, L101I, T112V, T124N, K136Q, V201I, L234I, I251L, R269K, D278A V281M 
SC02 SC02 None    E11D, S24N, D25E, V31I, M50I, L101I, T112V, S119P, T122I, T125N, K136Q, V201I, L234I, I251L, R269K, D278A  
SC03 SC03 None    V31I, M50T, L101I, T112V, T124N, K136Q, K188R, G193E, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281L, D288N 
SC04 SC04 None    M50T, I72V, E96D, L101I, G106A, T112V, S119T, K136Q, V165I, H171L, V201I, T206S, L234I, I251L, R269K, D278A V281M, S283G 
SC05 SC05 None    D25E, S39C, M50I, L101I, K103R, T112V, T124N, K136H, V201I, L234I, I251L, R269K, D278A  
SC06 SC06 None  E138A S147R D25E, V31I, M50T, F100V, L101I, L102R, T112V, T124N, K136Q, K188R, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M, S283N 
SC07 SC07 None    E11D, E13D, R20K, D25E, V31I, V37I, M50T, L101I, T112V, T124N, K136Q, K188R, G193E, V201I, T218I, L234I, I251L, D256E, R269K, D278A V281M 
SC09 SC09 None    E10A, D25E, V31I, M50I, I72V, L101I, T112V, S119T, T124N, G134D, K136Q, T218I, L234I, I251L, A265V, R269K, D278A  
SC100 SC100 None    D25E, V31I, M50T, E96D, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M, S283N 
SC101 SC101 None    V31I, T112V, T124N, T125A, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M, S283G, D288E 
SC103 SC103 None    A23V, I113V, S119P, T124N, T125A, G193E, V201I, S230N, L234I, D278A V281M 
SC104 SC104 None    D25E, V31I, M50T, L101I, K111T, T112V, T124N, K136Q, T206S, T218I, L234I, I251L, N254K, A265V, R269K, D278A V281M 
SC106 SC106 None    D6E, S17N, D25E, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M, R284G, D286N 
SC107 SC107 None    D25E, V31I, V32I, M50T, L101I, T112V, T124N, G134D, K136Q, D167E, V201I, L234I, R269K, D278A V281M 
SC11 SC11 None    V31I, M50T, T112V, S119T, T124N, K136Q, V201I, L234I, I251L, A265V, R269K, D278A V281M 
SC113 SC113 None   V151I D6T, K7A, S17N, D25E, I72V, F100Y, L101I, S119T, T125A, I135V, V201I, T206S, A265V  
SC114 SC114 None    K14R, V31I, M50T, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, R269K, D278A V281M 
SC115 SC115 None    D25E, L28I, S39C, M50I, L101I, T112V, I113V, T124N, K173R, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M, R284G, D288N 
SC116 SC116 None    E11D, D25E, V31I, M50T, L74I, L101I, K111Q, T112V, T124N, K136Q, T218I, L234I, I251L, A265V, R269K, D278A  
SC12 SC12 None    M50T, L101I, T112V, T124N, K136Q, V201I, T206S, Q214E, T218I, L234I, I251L, R269K, D278A V281M 
SC120 SC120 None    E11D, K14R, D25E, V31I, M50T, S57G, L101I, T112V, T124N, I135V, K136Q, V201I, T218I, L234I, I251L, R269K, D278A V281M 
SC121 SC121 None    E11D, D25E, V31I, S39G, M50I, C56S, I60M, I84M, E96D, L101I, L102V, T112V, T124N, T125A, K136Q, H171L, V201I, L234I, I251L, A265V, R269K, D278A  
SC126 SC126 None    V31I, M50I, L101I, T112V, S119P, T124N, G134D, K136Q, V201I, I208L, K211R, T218I, L234I, I251L, D256E, A265V, R269K, D278A  
SC127 SC127 None    D25E, V31I, M50T, L101I, T112V, S119P, T122I, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M, D288N 
SC128 SC128 None   V151I M50L, I72V, L101I, A265V  
SC13 SC13 None    D25E, V31I, M50T, L101I, T112V, T124N, K136Q, K173R, V201I, I208M, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC130 SC130 None    D25E, V31I, M50T, L101I, K111R, T112V, T124N, K136Q, I208L, K211R, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC131 SC131 None    E11D, D25E, V31I, M50T, L101I, T112V, T122I, T124N, K136Q V281M 
SC132 SC132 None    D25E, V31I, M50I, I72V, L101I, T112V, S119T, T124N, G134D, K136Q, T218I, L234I, I251L, A265V, R269K, D278A  
SC133 SC133 None    K14R, D25E, L28I, S39C, L101I, T112V, I135V, K136Q, V201I, L234I, I251L, D278S  
SC135 SC135 None    E11D, D25E, V31I, M50T, L101I, T112V, T124N, K136Q, G163A, G193E, V201I, A205S, T218I, L234I, I251L, A265V, R269K, D278A V281M, D286N 
SC138 SC138 None    S24N, D25E, V31I, M50T, L101I, G106A, T112V, T124N, K136Q, V201I, K215N, T218I, L234I, I251L, A265V, R269K, D278A  
SC14 SC14 None    E11D, S24N, D25E, V31I, L45Q, L101I, T112V, I113V, T124N, K136Q, V201I, T206S, T218I, L234I, I251L, D256E, A265V, D278A  
SC140 SC140 None    E11D, S24N, D25E, V31I, M50T, L101I, G106A, T112V, T124N, K136Q, V201I, K215N, T218I, L234I, I251L, A265V, R269K, D278A  
SC141 SC141 None    D25E, V31I, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A S283G 
SC142 SC142 None    D25E, V31I, M50T, L101I, K111R, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC143 SC143 None    D25E, V31I, M50T, T112V, T124N, T125A, K136Q, G193E, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M, D286N 
SC15 SC15 None    V31I, M50T, L101I, T112V, T124N, K136Q, I182V, V201I, T218I, L234I, A265V, R269K, D278A V281M, S283N 
SC19 SC19 None    E11D, S24N, D25E, V31I, M50T, L101I, T112V, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC22 SC22 None    D25E, V31I, M50I, L101I, T112V, T124N, G134D, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A  
SC24 SC24 None    E11D, S24N, D25E, V31I, M50T, L101I, T112V, S119P, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC29 SC29 None    D6N, K7D, V31I, I72V, S119P, V201I  
SC30 SC30 None    E11D, D25E, L28I, V37I, S39C, M50I, L101I, T112V, T122I, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC32 SC32 None    E11D, S24G, D25E, V32I, M50T, L101I, T112V, S119T, T122I, T124N, K136Q, D167E, V201I, T206S, T218I, I220V, L234I, I251L, A265V, R269K, D278A V281M 
SC33 SC33 None    D25E, V31I, M50T, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC34 SC34 None    D6E, V31I, V37I, S39C, M50I, I72V, T125A, V126L, K211R, T218I, L234I, D253E  
SC35 SC35 None   V151I D6T, K7A, E10D, M50I, I72V, L101I, S119T, T125A, I135V, T206S, A265V  
SC37 SC37 None    E10D, V31I, L45Q, I72V, I84L, L101I, I113V, S119P, T124A, T125A, K136Q, V201I, A205S, K211R, T218I, L234V, A265V, R269K, D278A V281M 
SC38 SC38 None    E11D, S24N, D25E, V31I, M50T, I60M, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC39 SC39 None    K14R, V31I, M50T, I72V, K111Q, T112V, T124N, K136Q, V201I, T206S, T218M, L234I, I251L, A265V, R269K, D278A V281M 
SC40 SC40 None    D25E, V31I, M50T, L101I, T112V, S119P, T122I, T124N, K136Q, K173R, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC42 SC42 None    E11D, S24N, D25E, V31I, V32I, D41N, M50T, L101I, G106A, T112V, K136Q, V201I, K215N, T218I, L234I, I251L, A265V, R269K, D278A  
SC43 SC43 None   F121L E11D, S24N, D25E, V31I, M50T, T112V, S119P, T122S, T124N, K136Q, V201I, T218I, K219N, N222K, L234I, I251L, A265V, R269K, D278A V281M 
SC44 SC44 None    V37I, D41N, L45I, I84L, S119P, T122I, T124A, T125A, K136N, M154I, V165I, V201I, A205S, K211R, T218I, L234V, D256E S283G, D288N 
SC46 SC46 None    D6N, K7E, E10A, K14R, E48D, I72V, F100Y, L101I, S119P, T125A, I135V, T206S, K240R, N254K, S255G  
SC47 SC47 None    E11D, D25E, V31I, M50T, A91T, E96D, L101I, T112V, S119R, T124N, K136Q, V201I, L234I, I251L, A265V, R269K, D278A V281M 
SC49 SC49 None    E11D, S24N, D25E, V31I, M50T, L101I, T112V, S119P, T122I, T124N, K136Q, V201I, K215N, L234I, I251L, R269K, D278A V281M 
SC50 SC50 None    E11D, D25E, V31I, M50T, L101I, K111G, T112V, S119P, T124N, T125A, K136Q, T218I, L234I, I251L, D256E, A265V, R269K, D278A  
SC51 SC51 None    E10D, M50I, L101I, T112V, T124N, T125A, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC52 SC52 None   E138V E11D, K14R, D25E, V31I, M50T, L101I, T112V, S119T, T124N, T125A, A133Q, K136Q, V201I, T206S, T218I, L234I, I251L, A265V, R269K, D278A V281M, D288E 
SC53 SC53 None    D25E, V32I, S39C, M50T, L101I, K103R, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, R269K, D278A V281M, D288E 
SC54 SC54 None    D6E, K14R, D25E, V32I, I72V, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, R269K, D278A S283G 
SC56 SC56 None    E11D, E13D, D25E, V31I, M50T, L101I, K111Q, T112V, T124N, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC63 SC63 None    E11D, D25E, V31I, V32I, L101I, T112V, T124N, K136Q, G193E, V201I, D278A V281M 
SC65 SC65 None    K7R, E11D, S17T, K111R, S119P, T124S, T125A, K156N, T206S, K211A, E212Q  
SC69 SC69 None    E11D, V31I, M50T, K111T, T112V, T124N, K136Q, V201I, T206S, L234I, I251L, A265V, R269K, D278A V281M 
SC70 SC70 None    K14R, D25E, V31I, M50T, L101I, T112V, I113V, S119P, T124N, K136Q, V201I, T206S, L234I, I251L, D256E, A265V, R269K, D278A V281M 
SC71 SC71 None    E11D, S17T, A23T, L28I, I72V, I113V, T124A Q62R 
SC72 SC72 None    K7R, E11D, S24N, D25E, V31I, M50T, T112V, S119T, T124N, K136Q, K156N, V201I, L234I, I251L, R269K, D278A V281M 
SC73 SC73 None    K14R, V31I, M50T, L101I, K111Q, T112V, T124N, K136H, D167E, V201I, T206S, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC77 SC77 None    K14R, D25E, L28I, V31I, V32I, M50I, I72V, L101I, T112V, T124N, I135V, K136Q, K173R, V201I, L234I, I251L, A265V, R269K, D278A V281M 
SC78 SC78 None    K14R, D25E, V31I, M50T, I72V, T112V, S119P, T124N, T125A, K136Q, V201I, T206S, L234I, I251L, A265V, R269K, D278A V281M 
SC82 SC82 None    E11D, S17T, M22I, I72V, T112A, S119P, T124A, T125A, A205T, K219Q, I220L  
SC83 SC83 None    E11D, S24N, D25E, V31I, V32I, L101I, T112V, S119P, T124N, T125A, K136Q, G163T, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
SC88 SC88 None   V151I E11D, A21T, M50T, I113V, T122I, T125A  
SC89 SC89 None    V31I, M50I, A91E, L101I, T112V, S119R, T124N, K136Q, T218I, L234I, I251L, A265V, R269K, D278A V281M, S283N 
SC91 SC91 None    E10D, K14R, S17N, S24D, D25E, S39C, L45Q, M50T, I72V, L101I, T112V, T124N, K136Q, V165I, V201I, T218I, L234I, I251L, R269K, D278A V281M, S283N, D288N 
SC93 SC93 None    E11D, V31I, V32I, V37I, D41N, I72V, L101I, T112V, T122I, T124N, G134D, K136Q, V201I, T206S, L234I, I251L, R269K, D278A V281M 
SC96 SC96 None    D25E, V31I, V32I, L45V, L101V, T112V, S119P, T124N, K136Q, V165I, V201I, I203M, T218I, L234I, I251L, A265V, R269K, D278A D288N 
SC97 SC97 None    E11D, D25E, V31I, M50T, V88I, L101I, T112V, T124N, K136Q, V201I, L234I, I251L, A265V, R269K, D278A V281M 
SC99 SC99 None    D25E, V32I, M50T, L101I, T112A, T124N, K136Q, I203M, T218I, L234I, R269K, D278A V281M