<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Bontell (2011)
Title Transmitted drug resistance and phylogenetic analysis of HIV CRF01_AE in northern Vietnam.
Citation Infect Genet Evol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 63
NumPts 63
Subtype CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
Pat001 09.VL987Us None None   E6D, V35T, T39N, V60I, K122E, D123S, I135T, I142V, S162C, K173I, Q174K, D177E, Q207S, R211S Q91FLS, H96HD, A98T 
Pat002 09.VL986U None None   E6D, K11T, V35T, T39K, K102Q, K122E, D123S, S162C, K173IR, Q174K, D177E, I178IM, T200A, Q207S, R211S  
Pat003 09.VL985Ui None None   E6D, K11T, V35T, T39EK, K122E, D123NS, S162C, K173IR, Q174K, D177E, I178IM, V179VI, Q207A, R211S  
Pat004 09.VL984U None None V75M  I5V, E6D, K11T, K32I, V35T, T39K, E53ED, K122E, D123N, I135R, S162C, K173T, Q174K, D177E, I178M, Q207N, R211K  
Pat005 09.VL983Us None None   E6ED, V35IM, K122E, D123S, S162C, K173T, Q174K, D177E, Q207S, R211S K220R 
Pat006 09.VL982Ui None None   E6D, K11T, V35T, T39EK, K122E, D123K, I135IATV, S162C, K173T, Q174K, D177E, I178M, T200A, Q207S, R211S  
Pat007 09.VL978Ui None None   E6D, V35T, T39K, K122E, D123S, T139TA, S162C, T165TI, K173I, Q174K, D177E, I178M, Q207S, R211S  
Pat008 09.VL977Ui None None   I5V, E6D, K11T, V35T, T39N, K122E, D123S, S162C, K173A, Q174K, D177E, T200TAEK, Q207S, R211S  
Pat009 09.VL975Us None None   E6D, K11T, V35T, T39A, V106VI, G112A, K122E, D123S, S162C, K173I, Q174K, G196E, Q207S, R211S  
Pat010 09.VL973Us None None   K11T, V35T, T39K, K43KQ, T69N, V106VI, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S  
Pat011 09.VL972U None None   E6D, K11T, V35T, K122E, D123S, I135R, I142V, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S D113DN 
Pat012 09.VL971Us None None  V179VD E6D, K11T, V35T, T39D, K122E, D123N, I135R, S162C, K173IM, Q174K, D177E, I178M, T200A, Q207S, R211S  
Pat013 09.VL969Hi None None   E6K, V35T, K122E, I142V, S162C, K173T, Q174K, D177E, I178M, T200A, Q207S, R211S  
Pat014 09.VL968Hs None None   E6D, K11T, V35T, E36EK, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S  
Pat015 09.VL967Hi None None   E6D, K11T, V35T, D121H, K122E, I142V, S162C, K173I, Q174K, D177E, I178M, T200A, Q207S, R211S  
Pat016 09.VL963H None None   E6D, K11T, V35T, T39AS, V106VI, G112A, K122E, D123S, S162C, K173I, Q174K, G196E, Q207S, R211S  
Pat017 09.VL960Hs None None   E6D, V35T, T39K, V106VI, K122E, D123S, S162C, K173I, Q174K, D177E, I178IM, T200A, R206RK, Q207N, R211S  
Pat018 09.VL958Hs None None  A98AG E6D, K11T, V35T, T39D, K122E, D123NS, I135T, S162C, K173T, Q174K, T200A, Q207N, R211S  
Pat019 09.VL957Hs None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200I, Q207S, R211S  
Pat020 09.VL956Hi None None   E6D, V35T, T39E, K122E, D123S, I135T, S162C, K173T, Q174K, D177E, T200A, Q207S, R211S  
Pat021 09.VL955H None None V75L  E6D, K11T, V35T, E79D, K102Q, K122E, D123S, S162C, K173I, Q174K, D177E, V179I, I202IV, Q207K, R211S  
Pat022 09.VL954Hs None None   E6D, K11T, V35T, T39N, K122E, D123S, S162C, K173AT, Q174K, D177E, I178M, Q207S, R211S  
Pat023 09.VL953Hi None None   E6D, K11KT, V35T, T39TAEK, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, Q207NS, R211S  
Pat024 09.VL952Hi None None   E6D, K11T, V35T, T39L, K122E, D123S, I135T, Q145QH, S162C, K173I, Q174K, D177E, T200A, Q207S, R211S  
Pat025 09.VL951Hi None None   E6D, V35T, T39EK, V106VI, V118VI, K122E, D123S, S162CY, K173I, Q174K, T200TS, I202V, Q207S, R211S  
Pat026 09.VL949Hs None None   I5V, E6D, K11T, V35T, T39N, K122E, D123S, I142V, S162C, K173I, Q174K, D177E, I202V, Q207S, R211S  
Pat027 09.VL948Hi None None   E6D, K11T, V35T, T39E, V60I, V106I, T107S, K122E, D123S, S162C, K173I, Q174K, D177E, V179I, Q207S, R211S  
Pat028 09.VL947Hs None None   E6D, K11KT, V35T, T39E, K122E, D123S, K173I, Q174K, D177E, T200A, Q207A, R211S V111VIM 
Pat029 09.VL946Hi None None L210W  V35T, T39K, K43Q, K122E, D123S, S162C, T165I, K173T, Q174K, D177E, I178M, G196E, Q197H, Q207N, R211K  
Pat030 09.VL840Yi None None   E6D, K11T, K20R, V35T, T39K, D121H, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, Q207S, H208HY, R211S  
Pat031 09.VL790Yi None None   E6D, K11T, V35T, K122E, D123NS, S162C, K173I, Q174K, D177E, I178IM, Q207S, R211S  
Pat032 08.VL789Us None None   E6D, K11T, V35T, T39K, T69N, V106I, K122E, D123S, S162C, Q174R, D177E, I178M, T200A, E203D, Q207D, R211S Q182QH 
Pat033 08.VL788Ui None None   E6D, E28K, V35T, T39K, G45GE, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, R206K, Q207N, R211S D17N 
Pat034 08.VL787U None None   E6D, K11T, V35T, T39E, V106VI, V118VI, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S  
Pat035 08.VL786Us None None   E6D, K11T, V35T, T39K, K43Q, K122E, D123S, I135IT, S162C, K173T, Q174K, D177E, I178M, T200TA, Q207N, L210M, R211S H96E, A98T 
Pat036 08.VL784Ui None None   P4H, I5IV, E6D, K11T, V35T, T39N, K122E, D123S, S162C, K173T, Q174K, D177E, I178M, Q207S, R211S  
Pat037 08.VL783Us None None   E6D, K11T, V35T, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200A, Q207S, R211N  
Pat038 08.VL782Ui None None   V35T, T39EK, K122E, D123S, S162C, K173IT, Q174K, D177E, I178IM, G196E, T200A, Q207G, R211S  
Pat039 08.VL779Ui None None   E6D, K11T, V35T, T39E, K122E, D123N, S162C, K173T, Q174K, D177E, I178M, Q207N, R211S  
Pat040 08.VL778Hi None None   E6D, K11T, V35T, K49R, K122E, D123N, I135T, T139V, S162C, K173R, Q174K, D177E, V179I, G196E, I202V, Q207S, R211S E194E*, H198HP 
Pat041 08.VL777Hi None None   E6D, K11T, V35T, T39N, T69P, K122E, D123NS, V148G, S162C, K173I, Q174K, D177E, Q207S, R211S I63M, W71W*, R78RK, E89EK, L109LGRV, V111VA, T128TS, P133R, N136NI 
Pat042 08.VL776Hi None None V75VL  E6D, K11T, V35T, T39N, K122KE, D123N, S162CG, K173I, Q174K, D177E, I178M, Q207R, R211S  
Pat043 08.VL775Hi None None   E6D, K11T, V35T, T39N, K122E, D123S, S162C, K173I, Q174K, D177E, T200TA, Q207S, R211S  
Pat044 08.VL773Hs None None   E6D, K11T, V35T, T39N, T69N, K122E, D123N, I135V, I142V, S162C, K173I, Q174K, D177E, T200A, Q207N, R211K  
Pat045 08.VL772Hs None None  Y181C E6D, K11T, E28K, K32E, V35T, T39RS, T69N, V111I, K122E, D123S, K173I, Q174K, D177E, T200A, Q207K, R211S  
Pat046 08.VL771Hs None None   V35T, T39K, K43E, T69TN, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200TP, Q207S, R211S  
Pat047 08.VL770H None None  V179D E6D, K11T, V21I, V35T, T39K, K122E, D123S, S162C, K173KR, D177E, Q207S, R211S  
Pat048 08.VL768Hs None None   E6D, V35T, T39K, K43Q, G45GE, K122E, D123S, S162Y, K173L, Q174K, D177E, T200A, Q207S, R211S  
Pat049 08.VL767Hs None None   E6D, K11T, V35IT, E36ED, K122E, D123S, S162C, K173IT, Q174K, D177E, T200A, E203D, Q207A, R211S  
Pat050 08.VL766Hi None None   E6D, K11T, V35T, T39E, V60I, V106I, T107S, K122E, D123S, S162C, K173I, Q174K, D177E, V179I, T200A, Q207S, R211S  
Pat051 08.VL765Hs None None   E6D, V35T, T39E, K43KR, K122E, D123S, I135IT, S162CY, K173RT, Q174K, D177E, I178IM, Q207S, R211S  
Pat052 08.VL764Hi None None   E6D, K11T, V35T, T39EK, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, V179VI, T200A, Q207S, R211S  
Pat053 08.VL763Hs None None   E6D, K11T, V35T, T39TK, K122E, D123S, S162C, K173IT, Q174K, D177E, I178IM, T200TA, Q207S, R211S  
Pat054 08.VL762Hi None None L74I  E6D, K11T, A33AT, V35T, T39K, K46KQ, W88F, T107S, V111I, K122E, D123S, S162C, K173I, Q174K, D177E, V179I, Q207S, R211S  
Pat055 08.VL746Hi None None   E6D, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, Q207S, R211S  
Pat056 08.VL744Hi None None   E6D, K11T, V35T, T39N, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, G196E, T200A, Q207G, R211S  
Pat057 08.VL740Hi None None   E6D, K11T, V35T, T39K, K122E, D123S, S162CY, K173IL, Q174K, D177E, Q207S, R211S  
Pat058 08.VL737Hs None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200TA, Q207S, R211S  
Pat059 08.VL735Hs None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, Q207S, R211S  
Pat060 08.VL733Hs None None   E6D, K11T, E28EA, V35T, T39E, K122E, D123S, I135T, I142V, S162C, K173A, Q174K, D177E, I178M, T200A, Q207S, R211S  
Pat061 08.VL732Hi None None   E6D, K11T, V35T, K122E, D123S, I142IV, S162C, K173AITV, Q174K, D177E, Q207S, R211S  
Pat062 08.VL731Hs None None   E6D, K11T, V35T, K102Q, K122E, D123N, S162C, K173I, Q174K, I202V, Q207S, R211S  
Pat063 08.VL730Hs None None V75VL  E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178IM, G196GE, Q207S, R211S