<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Ndembi (2011)
Title Transmitted antiretroviral drug resistance among newly HIV-1 diagnosed young individuals in Kampala.
Citation AIDS
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 70
NumPts 70
Subtype A, D, C, CRF10_CD, B

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
AICPS001 AICPS001 None None   I5V, E6D, K11A, V35T, V60I, D121N, K122E, D123N, I135T, S163T, K173A, Q174K, D177E, I178M, V179I, Q207A, R211S  
AICPS005 AICPS005 None None   V35T, E36A, V60I, K122E, D123S, I135T, E138A, S162C, K173L, Q174K, D177E, V179I, Q197H, T200A, Q207A, R211S  
AICPS006 AICPS006 None None   E6D, V8I, K11T, V35T, K49R, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, Q207A, R211N  
AICPS008 AICPS008 None None   V35I, V60I, D121Y, K122E, I135T, D177E, I178M, T200R, Q207E, L210M  
AICPS009 AICPS009 None None   E6K, K20R, V21I, V35T, T39R, V60I, K122E, D123N, K173S, D177E, V179I, E194D, T200A, I202V, Q207A  
AICPS033 AICPS033 None None T215R G190S P4T, V35T, T39N, E40D, K49R, V60I, K122E, I159V, D177E, I178M, Q197H, R199I, T200A, K201N, I202M, E203D, E204D, Q207S, R211K, G213E, K223E, L228V R206M, H208D, F214A, K219I, H221N, Q222K, E224H, P225C, P226R, F227V, W229Y, M230T, G231R, Y232Q, L234V, W239R 
AICPS034 AICPS034 None None   V35T, T39A, K49R, V60I, D121Y, K122E, T139I, I142V, D177E, I178M, Q207E, R211K  
AICPS035 AICPS035 None None   E6D, V21I, V35T, T39R, V60I, K122E, D123S, I135T, I142V, S162A, T165I, K173S, Q174K, D177E, V179I, Q207A, R211S K22I, L149H, K154N, P157R 
AICPS106 AICPS106 None None   E6D, V35T, T39A, E40D, S48T, V60I, K122E, D123N, I135T, G141A, S162C, K173A, Q174K, D177E, T200A, Q207E  
AICPS107 AICPS107 None None   V35T, E40D, K122E, D123S, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S  
AICPS108 AICPS108 None None   K11T, V21I, V35T, E36D, V60I, K122E, D123S, T165I, D177E, T200I, Q207E, R211K Q151T 
AICPS155 AICPS155 None None   V35T, E40D, K49R, V60I, D177E, Q207E, R211K I142N 
AICPS157 AICPS157 None None   E6D, V35T, S48T, V60I, K122E, D123S, I135T, E138G, I142V, R172K, K173S, Q174K, D177E, Q207E, R211K, F214L  
AICPS158 AICPS158 None None   K20R, V35T, V60I, D121H, I135T, T165I, K173S, Q174K, T200A, Q207A, R211S, F214L Q145P 
AICPS164 AICPS164 None None   E6D, V35T, V60I, V118I, K122E, D123N, I135T, K173S, Q174K, D177E, I178V, T200A, Q207A, R211S, F214L  
AICPS165 AICPS165 None None   E6K, K11T, K20R, V21I, V35T, K122E, D123N, K173A, D177E, I178V, V179I, E194D, T200A, I202V, Q207N, R211K T128I, N147Y, Q174I, S191V, D192M 
AICPS180 AICPS180 None None   K11A, V35T, K122E, D123G, S162G, T165TI, K173S, Q174K, D177E, I178M, Q197E, Q207A, R211S, F227S  
AICPS181 AICPS181 None None   V35T, E40D, K43R, V60I, D121H, K122E, D123E, I142V, D177E, I178M, T200I, Q207G, R211K  
AICPS216 AICPS216 None None   E6D, I31V, V35T, T39K, V60I, K122E, D123S, I135T, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S  
AICPS225 AICPS225 None None   E6N, V8I, V21I, V35T, V60I, K122E, D123S, I135IT, K173A, Q174R, D177E, V179T, I202IV, Q207E, R211S  
AICPS233 AICPS233 None None   V35T, E44D, V60I, D121Y, K122E, D123E, I135T, I142V, K173S, Q174K, V179I, T200A, I202V, Q207A, R211S  
AICPS247 AICPS247 None None   V35T, E40D, K49R, I50V, V60I, K104Q, K122E, D123S, I142V, P170H, Q174R, Q207E, R211K  
AICPS248 AICPS248 None None   I5V, E6D, I31V, V35T, T39A, E40D, K49R, V60I, S68G, T69N, T107S, K122R, D123E, E169K, K173S, D177E, Q197K, Q207E, R211K  
AICPS269 AICPS269 None None   V35T, T39M, V60I, D121Y, K122E, E169D, D177E, I178M, V189I, T200A, Q207E, R211K, F214L  
AICPS283 AICPS283 None None   E6D, I31V, V35T, T39I, E40D, K43N, K49R, V60I, K122E, D123S, I135T, T165I, K173S, D177E, T200A, I202V, Q207A, R211S C38R 
AICPS303 AICPS303 None None   E6D, T27S, V35T, T39A, V60I, D121Y, K122E, I135T, S162A, K173S, Q174K, D177E, T200A, I202V, Q207E  
AICPS335 AICPS335 None None   K11T, K20R, V21I, V35T, T39K, V60I, K122E, D123N, K173S, D177E, V179I, T200A, I202V, Q207A, R211S  
AICPS336 AICPS336 None None   V35T, T39R, K122E, D123G, A158S, K173S, Q174K, D177E, V179I, G196E, T200A, Q207A  
AICPS337 AICPS337 None None   L34I, V35T, K49R, V60I, D121Y, K122E, I135T, I142V, S162C, Q207E, R211K  
AICPS338 AICPS338 None None   V35T, T39Q, K49R, V60I, D121Y, K122E, K173Q, Q207G, R211K  
AICPS339 AICPS339 None None   V35T, T39A, E40D, K49R, V60I, D121Y, K122E, D123E, I135T, I142V, D177E, V179I, T200I, Q207E, R211K  
AICPS399 AICPS399 None None   K11T, K20R, V21I, I31V, V35T, T39R, K43Q, V60I, K122E, D123G, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S  
AICPS430 AICPS430 None None   P4T, V35T, T39R, V60I, D177E, V179I, T200I, Q207E, R211K  
AICPS432 AICPS432 None None   K11T, K20R, V21I, V35T, V60I, K122E, D123N, K173S, Q174K, D177E, Q207A, R211S  
AICPS434 AICPS434 None None   P4H, E6K, K11T, V21I, V35T, T39R, K122E, D123G, K173S, D177E, V179I, I202V, Q207A, R211S  
AICPS435 AICPS435 None None   V21I, V35T, V60I, K122E, D123N, K166N, K173S, Q174K, D177E, V179I, T200A, I202M, Q207A, R211S  
AICPS437 AICPS437 None None   V35T, E40D, K49R, V60I, D121Y, K122E, D123E, D177E, T200I, Q207E, R211K  
AICPS438 AICPS438 None None  G190A E6D, V35T, T39A, E40D, V60I, K122E, D123S, I135T, I142V, K173A, Q174K, D177E, V179I, T200I, Q207A, R211S  
AICPS439 AICPS439 None None   E6D, K20Q, V35I, V60I, A98S, T107S, D177E, I178M, T200I, Q207E, R211K K154I, F160C 
AICPS495 AICPS495 None None   V35T, V60I, K122E, D123N, I135T, K173S, Q174K, V179I, Q207A, R211S  
AICPS496 AICPS496 None None   I31V, V35T, K49R, V60I, D121Y, K122E, K173S, Q174K, D177E, V179I, Q207A, R211S L234F 
AICPS730 AICPS730 None None   E6D, V21I, V35T, E44D, V60I, D121Y, K122E, I135T, S162Y, K173L, Q174K, D177E, V179I, Q207A, R211S G45R 
NTCPS701 NTCPS701 None None   E6D, K20R, V35T, V60I, V118I, K122E, I135T, S163T, T165I, K173A, Q174K, D177E, V179I, Q207A, R211K, F214L F160Y 
NTCPS702 NTCPS702 None None L210W  V35T, T39A, V60I, K122E, D123N, I135T, I142V, K173L, Q174K, D177E, V179I, T200A, Q207A, R211N  
NTCPS704 NTCPS704 None None   I31V, V35T, T39I, E40D, K49R, V60I, K122E, D123G, I135T, I142M, K173T, Q174K, D177E, Q207A, R211S, F214L  
NTCPS705 NTCPS705 None None D67G  E6D, V21F, I31V, V35T, T39M, K49R, V60I, D121Y, K122E, E169D, D177E, I178M, T200A, Q207A F61S 
NTCPS707 NTCPS707 None None   K11T, K20R, V21I, V35T, T39G, K122T, D123N, K173S, Q174K, N175K, D177E, I178M, V179I, I202V, Q207D, R211K  
NTCPS708 NTCPS708 None None   P4S, V35T, E36A, T39E, E40D, K43R, S48T, V60I, Q145K, A158S, K166R, I167V, K173S, P176S, T200A, Q207E, R211K N137Y, I142N, N147T, Q161N 
NTCPS709 NTCPS709 None None   E6D, V35T, E36D, E40D, K49R, V60I, D121H, K122E, D123S, I135T, I142V, S162A, K173S, Q174K, D177E, V179I, T200A, Q207A  
NTCPS710 NTCPS710 None None   E6D, I31V, V35T, T39I, E40D, E44K, K49R, V60I, K122E, D123S, I135T, A158S, K173T, Q174K, D177E, T200V, Q207E, R211K C38H 
NTCPS716 NTCPS716 None None   V35T, K49R, K122E, D123S, A158S, K173A, N175H, T200A, Q207R, R211S  
NTCPS717 NTCPS717 None None   E6D, V21I, V35T, V60I, K122E, D123N, I135T, I142V, E169EK, K173D, Q174K, V179I, Q207A, R211S  
NTCPS719 NTCPS719 None None   K11T, K20R, V21I, V35T, T39E, K173S, V179I, T200A, I202V, Q207A  
NTCPS720 NTCPS720 None None   V35T, K122E, K173S, D177E, V179I, T200A, Q207N  
NTCPS721 NTCPS721 None None   E28K, K32E, V35T, E40D, V60I, Q174K, D177E, I178M, T200A, Q207A, R211S  
NTCPS722 NTCPS722 None None   E6D, V35I, V60I, I142T, E169D, K173T, Q174K, V179I, Q197K, T200A, Q207N, R211K H198N 
NTCPS723 NTCPS723 None None   E6D, K11I, V35T, E40D, V60I, K122E, I135T, T165I, I178L, Q207E, R211K  
NTCPS724 NTCPS724 None None   V35T, V60I, K122E, D123G, I135T, K173S, Q174K, V179I, T200A, Q207A, R211S K20N 
NTCPS725 NTCPS725 None None   V35T, E36D, E40D, K49R, V60I, K104R, D121Y, K122E, D123E, D177E, I178M, T200I, Q207E, R211K  
NTCPS726 NTCPS726 None None   K11T, K20R, V21I, K32R, V35T, T39K, S48A, K122E, D123N, K173T, D177E, V179I, I202V, Q207A, R211S  
NTCPS727 NTCPS727 None None   V35T, K49R, V60I, S68N, D121Y, K122E, R125K, D177E, T200M, Q207E, R211K  
NTCPS728 NTCPS728 None None  K101E E6K, K20R, V35T, T39A, E40D, V60I, K122E, E138A, S163T, M164L, E169K, K173L, Q174K, Q207E, F214L I195S, L205S 
NTCPS729 NTCPS729 None None   V35T, E40D, V60I, K122E, D123N, Y146S, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S P133R 
NTCPS731 NTCPS731 None None   E6D, V35T, E40D, V60I, K122E, D123S, I135T, E138A, K173L, Q174K, V179I, G196K, T200A, Q207A, R211S  
NTCPS732 NTCPS732 None None   V35I, K49R, S68N, V90I, D121Y, K122E, I142M, D177E, T200M, Q207G  
NTCPS733 NTCPS733 None None   V21I, V35I, K122E, D123S, I135R, I142L, K173S, D177E, V179I, I202V, Q207A, R211K, F214L P140S, G155A 
NTCPS735 NTCPS735 None None   K32R, V35T, T39M, V60I, D121Y, K122E, I142M, D177E, T200I, Q207E, R211K  
UGAIC431 UGAIC431 None None   P4S, V35T, V60I, D177E, V179I, T200I, Q207E, R211K  
UGNTC713 UGNTC713 None None   V35T, E40D, K49R, V60I, K122E, D123T, I135T, K166T, T200A, I202V, Q207E, R211K  
UGNTC737 UGNTC737 None None   P4H, E6N, V35T, V60I, K122E, D123S, I135T, K166R, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S  

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