<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Perez (2006)
Title HIV Type 1 molecular epidemiology in Cuba: High genetic diversity, frequent mosaicism, and recent expansion of BG intersubtype recombinant forms.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 425
NumPts 425
Subtype B, D, CRF18_cpx, C, CRF20_BG, CRF24_BG, G, F, H, CRF23_BG, A, CRF02_AG


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Page 1   from Isolate 1 to Isolate 100 from Total 425 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
10 CB_010 Unknown Unknown   A98S, D123DE, I135L, S162C, D177E, T200A, R211K, L228H, D250E, A272S, K277R, R284K, T286A, E297T  
102 CB_102 Unknown Unknown   V35T, E36A, T39D, K43Q, K122E, I135T, K173T, D177E, T200A, Q207G, R211Q, V245Q, A272P, K277R, K281R, E291D, V292I  
103 CB_103 Unknown Unknown   V35T, T39A, E40D, K49R, V60I, K122E, D123S, I135IT, I142T, E169D, D177E, Q207T, V245S, D250E, A272P, K277R, T286A  
105 CB_105 Unknown Unknown D67N, K70R, M184V  D121Y, K122E, I135T, S162C, D177E, I202V, R211K, A272P, K277R, E297A S191T 
106 CB_106 Unknown Unknown   K122E, S162C, D177E, T200A, R211K, A272P, K277R, E297A  
107 CB_107 Unknown Unknown   T39N, V60I, S68G, I135T, S162C, D177E, I178V, R211K, A272P, I293V, L301M S191T 
108 CB_108 Unknown Unknown   K49R, V106I, D123E, E169D, D177E, I178L, T200A, Q207E, R211K, F214L, V245M, L283I, I293V, P294A, E297R  
109 CB_109 Unknown Unknown   V35T, K49R, V60I, D123E, E169D, D177E, R211K, T286A, P294T  
111 CB_111 Unknown Unknown   K49R, E53D, D123E, E169D, I178L, G196E, T200A, E204K, Q207E, R211K, F214L, V245E  
112 CB_112 Unknown Unknown   K49R, V106I, D123E, S162N, E169D, I178L, T200A, Q207E, R211K, F214L, V245I  
113 CB_113 Unknown Unknown D67N, K70R, M184V, T215TI, K219Q  T69N, V118I, K122E, I135T, G196E, F214L, V245M, I293V, E312H  
115 CB_115 Unknown Unknown   K11R, D123E, I135T, S162C, D177E, I202V, R211K, F214L, V245I, A272P, K277R, T286A, I293V, E297P  
116 CB_116 Unknown Unknown K70R, M184V  K49R, D123E, I135T, E169D, I178L, Q207E, F214L, V245T, D250E, A272P, T286A  
117 CB_117 Unknown Unknown   A98S, I135L, S162C, D177E, T200A, R211K, L228H, D250E, A272S, K277R, T286A, E297T  
118 CB_118 Unknown Unknown M41L, D67N, T215Y  K122E, D123E, S162C, D177E, I178L, T200A, R211K, A272P, I293V, E297A  
119 CB_119 Unknown Unknown   K49R, A98AS, K101KR, V118I, D123E, I135T, E169D, I178L, T200A, Q207E, R211K, F214L, V245M, A272P, P294S, E312D  
12 CB_012 Unknown Unknown   A98S, K122E, I135V, S162C, D177E, T200A, R211K, L228H, D250E, A272S, K277R, T286A, E297T  
120 CB_120 Unknown Unknown   V35T, V60I, D123E, I142T, E169D, D177E, T200A, Q207E, V245K, D250E, T286A, P294T  
121 CB_121 Unknown Unknown   A98S, I135L, S162C, D177E, G196E, T200A, R211K, L228H, V245E, D250E, A272P, K277R, I293V, E297A, E298D  
122 CB_122 Unknown Unknown   V21I, V35T, T39K, K43E, V60I, K122P, D123E, Q174E, D177E, Q207E, R211K, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, E297A  
123 CB_123 Unknown Unknown   I135R, S162C, Q207A, R211S, V245E, T286A, S322T  
124 CB_124 Unknown Unknown   K49R, D123E, I135T, E169D, I178L, I202IV, Q207E, F214L, V245M, T286A, A288S, E297K  
125 CB_125 Unknown Unknown   V35T, E36A, T39D, K122E, D123G, K173T, D177E, Q207E, R211Q, V245Q, A272P, K277R, K281R, E291D, V292I, I326V  
127 CB_127 Unknown Unknown   V35T, V60I, K64R, K122E, K173A, Q174K, D177E, T200A, I202V, Q207E, P243T, V245Q, A272P, V276T, L279I, T286A, E291D, V292I, I293V, E297K  
128 CB_128 Unknown Unknown   V35T, E40D, K49R, I50V, V60I, K122E, D123N, E169D, D177E, Q207E, R211K, V245H, D250E, A272P, K277R, T286A D86A 
13 CB_013 Unknown Unknown   D121H, K122E, S162C, D177E, R211K, V245Q, E248D, A272P, K277R, I293V, E297T, P313Q  
132 CB_132 Unknown Unknown   K49R, D123E, I135T, E169D, I178L, Q207E, F214L, V245M, K277R  
135 CB_135 Unknown Unknown M41L, D67N, T69D, V75M, L210W, T215Y, K219R Y181C V35I, K43E, E44D, V118I, K122E, I135V, S162D, H208Y, R211K, K223Q, L228LH, V245E, I293V  
137 CB_137 Unknown Unknown   K11R, V35T, V60I, K122E, I135V, S162C, D177E, Q197K, T200A, Q207E, V245E, D250E, A272S, K277R, T286A, P313S, V317A  
138 CB_138 Unknown Unknown M41L, T215Y  V35MT, T39R, K43E, V118VI, D123E, I135T, S162C, K173A, Q174K, D177E, Q207E, R211K, V245Q, E248D, D250E, A272S, T286A, E291D, V292I, I293V, E297A, V317A, I326V  
139 CB_139 Unknown Unknown M41L, M184V, L210W, T215Y K103N, Y181C V35I, K102Q, D123E, I142V, S162C, D177E, I202V, R211K, H221HY, L228R, V245VM, A272P, T286A, E297K  
14 CB_014 Unknown Unknown   V35T, V60I, K122P, D123E, I135V, I142T, S162C, I178L, T200A, E203D, R211K, V245M, A272P, K277R, T286A, E297A  
144 CB_144 Unknown Unknown M184V  V35T, E40D, K49R, V60I, K101R, K122E, I135T, S162A, D177E, T200TA, Q207E, V245Q, D250E, A272P, K277R, T286A, I293V, K311R  
145 CB_145 Unknown Unknown M184V  V35T, T39E, S48T, K122E, D123S, A158S, K173A, Q174R, D177E, T200TA, Q207E, R211K, L228LR, V245Q, A272P, I274V, Q278H, K281R, T286A, A288T, E291D, V292I, I293V  
146 CB_146 Unknown Unknown M41L, T215Y Y188L V35T, I50T, V60I, K122E, I135V, K173I, Q174E, D177E, T200A, Q207K, R211S, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297A  
154 CB_154 Unknown Unknown A62V, T215F K103N, G190A V35I, S48T, E53D, D123E, I135IV, R211K, L228R, A272P, K277R, E297K  
155 CB_155 Unknown Unknown M184V  V35T, S68N, K122E, D123S, K173A, Q174K, D177E, V179I, Q207N, R211K  
156 CB_156 Unknown Unknown M184V  V21L, V35T, E40D, K49R, V60I, K122E, D123S, K173S, Q174K, D177E, I178V, V179I, Q207A, T216S  
161 CB_161 Unknown Unknown   K64R, K122E, R211K, T286TA  
167 CB_167 Unknown Unknown M184V  E6K, V35T, T39A, K122E, D123S, I135V, S162A, K166Q, K173A, Q174K, D177E, I178M, T200A, Q207E, R211RK, V245Q, D250E, A272P, K277R, T286A, V292I, I293V K13R 
168 CB_168 Unknown Unknown M184T  V35T, K49R, V60I, K122E, E169D, D177E, Q197K, Q207E, V245T, D250E, A272S, K277R, T286A, A288S, I293V, E297A, P313Q  
178 CB_178 Unknown Unknown   K122Q, I135T, S162C, D177E, G196R, R211K, V245Q, E248D, A272P, K277R, I293V, E297A  
18 CB_018 Unknown Unknown  K103N V35T, E36A, T39D, K122E, D123G, S162C, E169A, K173E, T200A, Q207D, R211K, V245Q, A272P, K277R, E291D, V292I, I293V  
181 CB_181 Unknown Unknown M41L, M184V, T215Y  V35T, V60I, K101R, K122P, D123E, I135T, I142V, K166R, D177E, T200A, Q207E, V245PT, A272P, K277R, T286A, E297A  
183 CB_183 Unknown Unknown D67N, M184V  V21I, V35T, V60I, I135T, K173A, D177E, T200A, Q207D, V245Q, E248N, D250E, S251N, A272P, K277R, T286A, E291D, V292I, I293V  
185 CB_185 Unknown Unknown M41L, D67N, K70R, T215F, K219Q A98G K49KR, V60I, V106I, V118VI, K122KE, D123E, E169D, I178FL, T200A, Q207E, H208Y, F214FL, V245M, A272P  
190 CB_190 Unknown Unknown   K11A, V35T, T39A, V106I, D121H, K122E, I135T, K173R, D177E, T200A, I202V, Q207D, I244V, V245K, E248D, D250E, A272P, K277R, R284K, T286A, E291D, V292I, I293V, K311R  
191 CB_191 Unknown Unknown T215Y K103N, Y181C V35T, T39KN, K122E, D123E, I135T, K166R, D177N, T200I, R211K, H221Y, V245K, A272P, K277R, I293V, E297R  
195 CB_195 Unknown Unknown M184V  V21I, V35T, T39A, V60I, A98S, K122E, I135V, I142V, K173I, Q174K, D177E, I178M, G196K, T200A, Q207E, V245Q, E248N, A272P, K277R, E291D, V292I, I293V, P294T, E297A, D324E  
196 CB_196 Unknown Unknown   D121Y, K122E, I135T, S162C, D177E, I202V, R211K, A272P, V276I, T286A, E297A, I326V S191T 
197 CB_197 Unknown Unknown   K49R, S68SG, V106I, D123E, E169D, D177E, I178L, G196E, E204EK, Q207E, F214L, V245M, K277R N306Y 
199 CB_199 Unknown Unknown   K49R, V106I, K122KE, D123E, E169D, K173KQ, I178L, V179I, Q207E, R211K, F214L, V245VM, A272S  
203 CB_203 Unknown Unknown  V179D V35T, T39A, K49R, V60I, K122E, I135R, E169D, D177E, Q197K, I202V, Q207G, V245T, D250E, A272S, K277R, T286A, P313Q I180IF 
21 CB_021 Unknown Unknown   K49R, A98S, V106I, D123E, E169D, I178L, T200A, I202V, Q207E, R211K, F214L, V245M, A272P  
210 CB_210 Unknown Unknown  V179E V21I, V35T, E36D, T39A, E40D, V60I, K122KE, I135T, S162H, D177E, T200A, R211S, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297EK, E312D, D324E  
211 CB_211 Unknown Unknown A62AV  E28A, K122E, D123E, I135T, I142IT, S162C, I178L, Q207H, R211K, V245E, A272P, K277R, E297A  
24 CB_024 Unknown Unknown   V35T, E40D, K49R, V60I, K122E, E169D, D177E, T200A, Q207E, V245T, D250Q, S251D, A272P, K277R, T286A, E297A  
25 CB_025 Unknown Unknown   V35T, E40D, K43E, V60I, D123E, I142T, E169D, D177E, T200A, Q207E, V245K, D250E, K277R, T286A, P294T  
28 CB_028 Unknown Unknown   K43E, V60I, S68G, K122E, I135T, Q174H, D177E, R211K, A272P, T286A, E297K S191T 
29 CB_029 Unknown Unknown M184MV  V35T, E40D, K49R, V60I, E169D, D177E, T200A, Q207E  
CB_003 Unknown Unknown   K43KR, R83K, A98S, E138A, S162C, Q174G, Q207H, R211K, A272P, Q278H, T286A, I293V  
31 CB_031 Unknown Unknown   V35T, K49R, V60I, K122E, E169D, Q197K, T200A, Q207E, R211K, V245T, D250E, A272S, T286A, P313Q  
35 CB_035 Unknown Unknown L74V Y181C E28A, K122E, I135T, S162C, I178L, Q207H, R211K, H221Y, V245E, A272P, E297A  
38 CB_038 Unknown Unknown M184V  V35T, V60I, K122P, D123G, E169D, D177E, T200A, Q207E, R211K, V245K, A272P, V276I, T286A, E291D, I293V, E297A  
CB_004 Unknown Unknown   E36EG, K101R, K122P, S162C, D177E, R211K, V245Q, E248D, A272P, K277R, I293V, E297T  
41 CB_041 Unknown Unknown M41L, M184V, T215Y  V35T, E40ED, K43N, K49R, V60I, K122E, E169D, D177E, T200A, Q207E, V245T, S251I, A272S, K277R, T286A, I293V  
42 CB_042 Unknown Unknown   V35T, E36A, T39D, K122E, D123S, I142M, K173T, Q174QR, D177E, I178M, T200A, Q207E, R211K, V245Q, A272P, E291D, V292I, K311R L193W 
43 CB_043 Unknown Unknown   D123E, S162C, D177E, R211K, V245Q, E248D, A272P, K277R, E297A  
44 CB_044 Unknown Unknown   V21I, V35T, T39K, V60I, K122P, D123E, I135T, Q174E, D177E, Q207E, R211K, V245Q, E248ED, A272S, T286A, E291D, V292I, I293V, E297A K281T 
45 CB_045 Unknown Unknown T215Y  K11T, V35T, T39D, K173L, Q174K, T200A, I202V, E204D, Q207A, R211RK, F214L, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, V317A  
46 CB_046 Unknown Unknown M41L, D67DN, K70KR, L74IV, T215S, K219Q L100I, K103N V35T, T39D, K43R, K122E, D123G, K173A, T200A, Q207D, H208HY, R211K, L228LH, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
47 CB_047 Unknown Unknown   K49R, K122E, D123DE, I135T, E169D, I178L, E194D, Q207E, R211K, F214L, V245M, P294S, E297K  
49 CB_049 Unknown Unknown   K49R, K122E, D123E, I135T, E169D, D177E, I178L, Q197K, T200A, Q207E, R211K, F214L, V245M, L283I, I293V, E297K  
CB_005 Unknown Unknown   K20R, K49R, D123E, I135T, T139S, I142T, T165I, E169D, I178L, T200A, Q207E, R211K, F214L, V245M, A272S, I293V  
51 CB_051 Unknown Unknown   V35T, V60I, K122P, D123E, I135V, Q174E, D177E, I178M, Q207AE, R211K, F214L, V245Q, A272P, V276I, L283I, T286A, E291D, I293V, E297A  
53 CB_053 Unknown Unknown   V10A, V35I, V60I, K122P, I135V, Q174E, D177E, Q207K, V245K, D250E, S251N, A272P, V276I, L283I, T286A, E291D, V292I, I293V, E297A  
54 CB_054 Unknown Unknown M41L, L74I, M184V, L210W, T215Y  T39TA, K43Q, E44D, V118I, K122E, I142V, S162Y, D177E, T200I, H208Y, L228R, V245K, K277R, A288S, I293V  
55 CB_055 Unknown Unknown   K49R, D123E, I135T, E169D, I202V, Q207E, F214L, V245VM, E248N, D250E, A272P, K311R  
59 CB_059 Unknown Unknown   I135L, S162C, D177E, Q197K, L228N, D250E, A272P, K277R, T286A, E297T  
CB_006 Unknown Unknown   V8I, V35T, T39A, E40D, K49R, V60I, S68G, K122E, E169D, T200TA, Q207D  
65 CB_065 Unknown Unknown   V21I, V35T, V60I, K122P, D123E, I135V, Q174E, D177E, Q207K, R211K, V245LQ, D250E, A272S, V276I, K277R, T286A, E291D, V292I, I293V, E297A  
68 CB_068 Unknown Unknown D67N, K70R, M184V, T215Y, K219E K103N, Y181C K11R, V35M, K49R, K122E, D123E, S162A, I178M, V179I, Q207E, P243S, A272P, R284K, I293V, E297H, E312T  
69 CB_069 Unknown Unknown  K103N V35I, T39TS, S68G, K82R, K122E, I135T, S162C, I178M, G196E, T200I, R211K, V245M, A272P, K277R, A288S, I293V  
70 CB_070 Unknown Unknown M184V  K20R, V35T, T39E, V60I, T107S, K122E, D123N, I135T, Q197H, T200E, Q207A, V245T, D250E, A272P, K277R, T286A, E291D, V292I, I293V, E297T  
74 CB_074 Unknown Unknown A62V, V75I, F116Y, Q151M, M184V Y181C I31L, A98S, K122E, Q207E, R211K, I293V, E297Q, L325I  
75 CB_075 Unknown Unknown   V35T, E36A, T39E, K122E, A158S, K173T, Q174K, T200A, Q207E, R211K, V245Q, A272P, E291D, V292I, I293V, P294T, A304E  
77 CB_077 Unknown Unknown M184V  E6D, V35T, V60I, D121H, I135M, T200A, Q207A, R211K, I244V, V245K, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297K  
81 CB_081 Unknown Unknown M41L, T215N  K49R, V60I, I135T, R211K, K277R, I293V  
82 CB_082 Unknown Unknown   E44D, S68G, S162C, I178L, T200I, R211K, A272P, K277R, R284K, T286A, A288S, I293V, E297K, I326V  
84 CB_084 Unknown Unknown D67N, K70R, M184V, K219Q K103KN, Y181YC K11T, V35T, T39M, E40ED, K49R, E53D, V60I, D121H, K122E, D123S, I135T, D177E, I178M, T200A, Q207A, R211K, P243A, V245K, A272P, T286A, E291D, V292I, I293V  
88 CB_088 Unknown Unknown   V35T, E40D, V60I, K122E, D123S, I142T, E169D, D177E, Q207E, V245S, D250E, A272P, K277R  
89 CB_089 Unknown Unknown   V35T, E40D, V60I, K122E, D123S, I142T, E169D, D177E, Q207E, R211K, V245S, D250E, A272P, K277R, T286A  
CB_009 Unknown Unknown M41L, D67N, M184V, L210W, T215Y V179D, G190A K43N, E44D, V60I, V118I, K122E, I135T, E138Q, Q207E, R211K, V245E, S251I, K277R, A288S, I293V, E297A  
90 CB_090 Unknown Unknown   V21I, V35T, V60I, K122P, I135T, Q174E, D177E, Q207E, R211K, V245Q, A272S, V276I, K277R, T286A, E291D, V292I, I293V, E297A, I326V  
91 CB_091 Unknown Unknown T215S  V8I, V35T, T39A, E40D, K49R, V60I, S68G, K122E, E169D, D177E, I178IM, Q207E, V245T, E248D, A272P, K277R, T286A, P294T, P313Q  
93 CB_093 Unknown Unknown   K49R, D123E, I135T, E169D, I178L, T200I, Q207E, R211K, F214L, V245M, A272P, K281R  
94 CB_094 Unknown Unknown M41L, M184V, T215Y  V35T, T39L, D123E, I135V, S162C, R211K, V241L, V245K, T286A, I293V, E312Q  
95 CB_095 Unknown Unknown   V35T, T39A, E40D, K49R, I50V, V60I, S68G, K122E, I135T, T165I, E169D, D177E, Q207E, V245T, S251I, A272S, K277R, T286A  
97 CB_097 Unknown Unknown   K49R, V106I, D123E, I135T, E169D, I178L, T200A, Q207G, R211K, F214L, V245M, A272P, K277R  
98 CB_098 Unknown Unknown M41L, T215Y  K49R, D123E, I135IT, E169D, I178L, Q207E, V245M, A272P, I326V