Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Struck (2007)
Title A new HIV-1 B/F1 unique recombinant form (URF) outbreak in Luxembourg: near full-length genome characterization and phylogenetic analysis.
Citation Direct Genbank Submission
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 20
NumPts 20
Subtype CRF42_BF

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
luBF_01.03 luBF_01.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T124TA, T125V, G163E, V201I, L234V  
luBF_02.03 luBF_02.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_03.03 luBF_03.03 None    E11D, R20K, L28I, V37I, S39C, I84L, L101I, T124TS, T125V, G163E, V201I, L234V  
luBF_04.03 luBF_04.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_05.03 luBF_05.03 None    E11D, R20K, L28I, V37I, S39C, I72IV, I84L, L101I, S119SG, T122TI, T125V, G163E, V201I, L234V  
luBF_06.03 luBF_06.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_07.03 luBF_07.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_08.03 luBF_08.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_09.03 luBF_09.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_10.03 luBF_10.03 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_11.04 luBF_11.04 None    E11D, R20K, L28I, V37I, S39C, I72IV, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_12.04 luBF_12.04 None    E11D, R20K, L28I, V37I, S39C, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_13.05 luBF_13.05 None    E11D, R20K, L28I, V37I, S39C, M50I, I84L, L101I, T124TA, T125V, G163E, V201I, L234V  
luBF_14.05 luBF_14.05 None    E11D, R20K, L28I, V37I, S39C, M50I, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_16.05 luBF_16.05 None    E11D, R20K, L28I, V37I, S39C, I72V, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_17.05 luBF_17.05 None    E11D, R20K, L28I, V37I, S39C, M50IL, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_18.06 luBF_18.06 None    E11D, L28I, V37I, S39C, I84L, L101I, T124A, T125V, G163E, V201I, L234I  
luBF_19.06 luBF_19.06 None    E11D, R20K, L28I, V37I, S39C, I84L, L101I, T125V, G163E, V201I, L234V  
luBF_20.06 luBF_20.06 None    E11D, R20K, L28I, V37I, S39C, I84L, L101I, S119G, T125V, G163E, V201I, L234V, V249I  
luBF_21.06 luBF_21.06 None    E11D, R20K, L28I, V37I, S39C, V77A, I84L, L101I, T124A, T125V, G163GE, V180VI, V201I, Q216QH, N222H, L234V  

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