Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Diop-Ndiaye (2010)
Title Antiretroviral drug resistance mutations in antiretroviral-naive patients from Senegal.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 160
NumPts 160
Subtype CRF02_AG, B, C, G, A, J, D, F, CRF45_cpx, CRF01_AE, CRF09_cpx

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 160 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
101HALD 101HALD None    L63A  
1041SC 1041SC None    I15V, G16A, E35D, M36I, N37D, R57K, D60E, Q61E, L63T, C67E, H69K, V77I, L89M  
105HALD 105HALD None    I13V, K20I, M36I, R41K, H69K, L89M  
1099SC 1099SC None    L10I, I13V, L19P, K20I, M36I, R41K, H69K, L89M  
114HALD 114HALD None    L10I, T12S, I13V, K14R, G16E, E35D, M36I, R41K, K45R, L63T, H69K, L89M  
123HALD 123HALD None    I13V, K20I, E35K, M36I, N37E, R41K, H69K, V77I, L89M  
125HPD 125HPD None    L10I, T12A, I13V, E35D, M36I, R41K, K45R, L63P, H69K, K70R, L89M, T91I  
1264SC 1264SC None    L10V, I13V, K14R, L19P, K20I, M36I, R41K, L63P, H69K, K70R, L89M  
127HPD 127HPD None    T12A, I13V, G16E, K20M, E35D, M36I, R41K, R57K, L63H, H69K, L89M  
133HALD 133HALD None    L10I, I13V, I15L, K20I, M36I, R41K, L63V, H69K, L89M  
142HPD 142HPD None    T12S, I15V, L19T, K20R, M36I, R41K, Q61E, L63S, H69K, L89M, I93L  
159HPD 159HPD None    K14R, I15V, M36I, N37K, R41N, H69K, V82I, L89M, I93L  
160HALD 160HALD None    T12S, I15V, E35D, M36I, R41K, Q61HN, I62V, L63P, H69Y  
167HPD 167HPD None    I13V, K14R, L19P, K20I, M36I, R41K, L63P, H69K, L89M  
185HALD 185HALD None    I13V, L63P  
191HPD 191HPD None    I13V, K20I, M36I, N37S, R41K, H69K, K70R, L89M  
208HPD 208HPD None    I13V, I15L, K20I, M36I, R41K, I64L, H69K, L89M  
210HPD 210HPD None    I13V, K14R, G17E, K20I, M36I, R41K, I64IM, H69K, K70R, L89M  
214HPD 214HPD None    I13V, G16E, K20I, M36I, L63IS, H69K, I72IV, L89M  
229HALD 229HALD None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
249HALD 249HALD None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, L89M  
255HALD 255HALD None    T12K, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M  
258HALD 258HALD None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, L89M  
264HALD 264HALD None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
273HALD 273HALD None    I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
27HALD 27HALD None    I13A, K20V, M36I, R41K, H69K, L89M  
303HALD 303HALD None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, L89M  
324HALD 324HALD None    I13V, K14R, G16Q, K20I, M36I, N37D, R41K, R57K, I64L, H69K, K70R, L89M  
334HALD 334HALD None    I13V, K14R, K20I, M36I, R41K, L63P, I64L, C67E, H69K, V82I, L89M  
337HALD 337HALD None    I13V, I15L, K20I, M36I, R41K, H69K, L89M  
34HALD 34HALD None    I13V, I15L, K20I, M36I, R41K, I64M, H69K, L89M  
46HALD 46HALD None    I13V, K14R, G17E, K20I, M36I, N37S, R41K, I64M, H69K, L89M  
471HALD 471HALD None    L10IV, I13V, L19P, K20I, M36I, N37S, R41K, H69K, L89M  
475HALD 475HALD None    I13V, K20I, M36I, R41K, H69K, L89M  
488HALD 488HALD None    T12Q, I13A, K20V, A22V, M36I, R41K, L63H, H69K, L89I  
50HALD 50HALD None    L10V, I13V, K14R, G16E, K20V, M36I, R41K, H69K, K70R, L89M  
510HALD 510HALD None    T12S, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89LM, I93L  
537HALD 537HALD None    I13V, K20I, M36I, R41K, I64L, H69K, L89M  
56HALD 56HALD None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, V82I, L89M  
57HALD 57HALD None   V11I L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
58HALD 58HALD None    L10V, I13V, K14R, I15V, G16E, L19I, K20I, M36I, P39S, R41K, H69K, I72M, L89M  
61HPD 61HPD None    I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89M  
63HALD 63HALD None    I13A, K14R, L19LP, K20I, M36I, R41K, H69K, L89M  
65HALD 65HALD None    L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
66HPD 66HPD None    T12S, I15V, L19I, M36I, R41K, L63A, H69K, I93L  
67HPD 67HPD None  M46ML  I13V, I15V, M36I, L63A, H69K  
68HPD 68HPD None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, C67E, H69K, V82I, L89M, I93V  
71HPD 71HPD None    I13V, L19P, K20I, M36I, R41K, L63P, H69K, K70R, L89M  
74HALD 74HALD None    I13A, K20I, M36I, R41K, H69K, L89M  
75HALD 75HALD None    L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
77HALD 77HALD None    I13V, K14R, I15V, K20I, M36I, R41K, L63P, H69K, L89M  
78HALD 78HALD None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
82HPD 82HPD None    I13V, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
86HPD 86HPD None    T12S, K14R, I15V, L19V, K20R, M36I, R41K, L63V, H69K, L89M  
87HALD 87HALD None    L10V, I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
89HPD 89HPD None    I13V, K14R, L19S, K20M, M36I, R41K, L63P, H69K, K70R, L89I  
90HALD 90HALD None    T12A, I13V, K20I, M36I, R41K, I64V, H69K, L89M  
97HALD 97HALD None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
L009 L009 None    L10V, I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
L049 L049 None    I13V, K14R, I15V, K20I, M36I, N37E, R41K, K43R, L63LI, I64M, H69K, L89M  
L064 L064 None    I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M  
L117 L117 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M  
L140 L140 None    L10V, I13V, K20R, M36I, R41K, H69K, L89M  
L152 L152 None    I13A, K14R, L19P, K20I, A22V, M36I, R41K, L63P, H69K, L89I  
L153 L153 None    I13V, I15V, L19I, K20I, M36I, R41K, G68E, H69R, L89M  
LV10 LV10 None    L10I, I13V, M36I, R41K, K43R, H69Q, L89M  
LV1027SC LV1027SC None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, L89M  
LV11 LV11 None    I13V, K14R, G16E, K20I, M36I, R41K, L63N, H69K, I72M, L89M  
LV14HALD LV14HALD None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89M  
LV15HALD LV15HALD None    L10I, V11A, I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89M  
LV17HALD LV17HALD None    L19E, N37T, R57K, I64V  
LV18HALD LV18HALD None    I13V, K14R, L19P, K20I, M36I, R41K, Y59F, H69K, L89M  
LV22HALD LV22HALD None    L63Q, I64V, V77I, I93L  
LV26HALD LV26HALD None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, V77I, L89M  
LV29HALD LV29HALD None    T12A, I13V, K14R, K20I, M36I, R41K, H69K, L89M  
LV31HALD LV31HALD None    L10I, I13V, G16A, M36I, R41K, D60E, Q61E, C67G, H69K, L89M  
LV32HALD LV32HALD None    I13V, K14R, I15V, L19M, K20I, M36I, L63S, H69K, K70E, V82I, L89I  
LV37HALD LV37HALD None    I13V, K14R, K20I, M36I, R41K, L63S, H69K, L89M  
LV39HALD LV39HALD None    T12S, L19I, K20R, M36I, R41K, L63T, H69K, L89M, I93L  
LV40HALD LV40HALD None    L10I, I13V, I15V, G16E, L19I, E35D, R41K, L63S, E65D, H69K, L89M  
LV41HPD LV41HPD None    I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
LV45HALD LV45HALD None    I13V, K14R, G17E, K20I, M36I, N37S, R41K, I64M, H69K, L89M  
LV47HALD LV47HALD None    I13V, K14R, L19S, K20M, M36I, R41K, L63P, H69K, K70R, L89I  
LV49HALD LV49HALD None    I13V, K20I, M36I, R41K, H69K, I72M, L89M  
LV50HALD LV50HALD None    L10V, I13V, K14R, G16E, K20V, M36I, R41K, H69K, K70R, L89M  
LV54HALD LV54HALD None    I13V, L19P, K20I, M36I, R41K, H69K, L89M  
LV56HALD LV56HALD None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, V82I, L89M  
LV57HALD LV57HALD None   V11I L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
LV59HALD LV59HALD None    L10V, T12K, I13V, L19P, K20I, M36I, R41K, I64L, H69K, L89M  
LV62HALD LV62HALD None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89M  
LV62HPD LV62HPD None    I13V, K14R, G17E, K20I, M36I, R41K, H69K, K70R, L89M  
LV63HPD LV63HPD None    L10I, I13V, K14R, K20I, E35D, M36I, R41K, L63P, C67E, H69K, V82I, L89M, I93V  
LV64HALD LV64HALD None    I13V, I15V, K20I, M36I, R41K, I64M, H69K, K70R, L89M  
LV65HPD LV65HPD None    I13V, Q61E, L63P  
LV66HALD LV66HALD None    I13V, L19P, K20I, M36I, R41K, I64M, H69K, L89M  
LV69HPD LV69HPD None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
LV73HPD LV73HPD None    N37S, R41K, L63P, I72V  
LV8HPD LV8HPD None    I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
LVMP1152 LVMP1152 None    L10V, I13V, I15V, E35D, M36I, R41K, H69K, L89M R8Q 
LVMP1213 LVMP1213 None    V11F, T12K, I13V, K14R, G17E, K20I, E21K, E35K, M36I, R41K, I64M, H69K, T74S, L89I A22P, D25N, D29N, V56L, R87Q, Q92P 

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