<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Papathanasopoulos (2010)
Title Characterization of HIV type 1 genetic diversity among South African participants enrolled in the AIDS vaccine integrated project (AVIP) study.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 35
NumPts 35
Subtype C, A

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
14998 06ZA14998 None None   V35T, E36A, T39E, S48T, W88C, K122E, D123G, T139A, K173T, D177E, T200TA, Q207K, R211RK, V245KNT, A272Q, K281KR, T286A, E291D, V292I  
15141 06ZA15141 None None   P4PS, V35T, E36A, T39E, K43KR, S48T, V60I, K122E, D123G, I135V, S162C, K173A, Q174QK, D177E, T200A, Q207E, R211K, V245Q, E248V, A272P, T286V, E291D, V292I, I293V L283C 
15274 06ZA15274 None None   E6K, V8I, V35T, T39E, S48T, K122E, K173A, D177E, I178L, T200A, E204K, Q207D, R211K, V245Q, E248D, A272P, K277R, E291D, V292I, I293V  
16642 06ZA16642 None None   V35K, T39E, S48T, D121Y, K122E, S162C, K173A, Q174K, D177E, G196GE, T200A, Q207E, R211RK, V245Q, A272P, T286A, E291ED, V292VI, I293V  
16853 06ZA16853 None None   K20KR, V35T, E36A, T39E, S48T, V60I, K122E, I142IV, K166KR, E169Q, K173KAET, Q174K, T200A, Q207A, R211RK, F214FL, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
16923 06ZA16923 None None  K103N V35M, E36A, T39E, S48E, K122KE, D123DG, K166R, K173A, D177E, I178IV, G196E, T200A, E204V, Q207D, R211RK, V245Q, D250E, A272S, K277R, E291D, V292I, I293V  
16938 06ZA16938 None None   T27S, V35T, E36EA, T39E, S48T, K122E, D123S, S162C, K173A, D177E, I178L, T200A, Q207E, V245Q, K249KR, D250E, A272P, K277R, T286A, E291D, V292I, I293V, E297T  
16976 06ZA16976 None None   V35T, E36A, T39E, S48ST, K122KE, I135V, S162C, K173A, D177E, I178IM, T200A, E204K, Q207E, R211K, V245Q, A272P, T286A, E291D, V292I, I293V  
16985 06ZA16985 None None   V35T, E36A, T39E, E40ED, S48T, K122E, D123DG, K173A, D177G, T200A, I202IV, Q207E, R211K, V245Q, A272Q, K277R, R284RK, T286A, E291D, V292I  
16997 06ZA16997 None None   V35T, E36A, T39E, S48ST, V60I, K122A, T165I, K173A, Q174K, D177E, I178L, G196E, T200A, Q207E, R211K, F214L, V245Q, A272P, E291D, V292I, I293V  
17058 06ZA17058 None None   V35T, E36A, T39D, S48T, K122E, D123G, K166R, E169EK, K173A, D177DE, G196R, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
17067 06ZA17067 None None   V35T, T39E, S48T, K104KR, K122E, D123DG, K166KR, T200A, Q207E, R211K, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
17071 06ZA17071 None None   V35T, T39EK, S48T, V60I, S162C, K173A, D177E, T200A, E204K, Q207D, R211K, V245Q, E248D, A272P, E291D, V292I, I293V  
17189 07ZA17189 None None   K32A, V35T, E36A, T39E, S48T, K122E, D123G, S162C, K173A, Q174K, I178L, T200A, R211EK, V245K, D250E, A272P, L283I, T286A, E291D, V292I, I293V M16K 
17193 07ZA17193 None None   E28EK, V35T, E36A, T39DE, D86DE, K103R, I135V, I142T, T200A, Q207E, R211K, F214L, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V E29EK, W88AS 
17200 07ZA17200 None None   V35T, T39E, S48T, K122E, D123S, K166KR, K173T, D177E, T200E, Q207A, R211K, V245Q, A272P, K277R, T286A, E291D, V292I  
17212 07ZA17212 None None   K20KR, V35T, E36A, T39E, E40ED, K122E, D123NS, A158AS, K173T, T200A, Q207E, R211K, V245M, L283I, T286A, E291D, V292VI, I293V  
17241 07ZA17241 None None   I5IV, V8VI, P9PS, K11KR, V35T, E36EA, T39E, S48T, K122E, D123S, S162C, K173AT, D177E, I178L, T200A, Q207E, R211K, V245Q, D250DE, A272P, K275Q, K281R, T286A, E291D, V292I, I293V  
17332 07ZA17332 None None   P14PT, V35T, E36EA, T39KQ, S48T, V60I, K122E, D123EG, K173A, D177E, T200A, I202V, Q207A, R211K, V245Q, K277R, T286A, E291D, V292I, I293V M16MK, G93GA, L100L* 
17409 07ZA17409 None None   V35T, T39E, S48T, K122E, D123NS, K173T, D177E, T200A, Q207G, R211K, V245Q, A272P, E291D, V292I  
17462 07ZA17462 None None   K20KR, T27S, V35T, E36A, T39E, E40D, S48T, K122E, D123N, I135T, S162C, K166KR, K173AT, Q174K, D177E, L187LF, T200A, I202V, R211K, V245Q, D250E, K277R, T286A, E291D, V292I, I293V, P294T  
17491 07ZA17491 None None   V35T, T39A, S48T, A158S, T165I, K173AV, Q174KN, D177E, T200A, Q207E, V245K, E248D, A272P, K277R, K281KR, T286AV, E291D, V292I, I293V  
17503 07ZA17503 None None   P4S, K20R, V35T, E36A, T39E, S48T, V60I, V118I, K122E, D123S, E138A, T165I, E169D, K173A, Q174K, T200A, Q207E, R211K, F214L, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V  
17556 07ZA17556 None None   V35T, E36A, T39E, S48T, K122E, D123N, I135V, S162Y, K173I, Q174K, D177G, T200A, Q207E, R211K, P243T, V245Q, A272P, T286A, V292I  
17568 07ZA17568 None None   V8I, V35T, E36A, T39E, S48T, V60I, K104R, K122E, D123G, K173A, D177E, T200A, Q207E, V245Q, A272PQ, K277KR, Q278QH, T286A, E291D, V292I, I293V I257KT 
17579 07ZA17579 None None   E6EK, K11T, K20R, V21I, V35T, K122E, D123N, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q, E248D, V276I, K281R, R284K, T286A, E291D, V292I, I293V, P294T  
17604 07ZA17604 None None   V35T, E36A, T39E, K43R, S48T, K122E, S162C, K173A, D177E, T200A, E203D, Q207E, V245Q, E248D, D250G, A272P, E291D, V292I, I293V T131PS 
17657 07ZA17657 None None  K103KN V35T, E36A, T39E, E40D, K122E, D123N, A158S, S162A, K173AT, D177E, T200A, Q207G, R211K, V245Q, E248N, A272P, K277R, T286A, A288AS, E291D, V292I  
17699 07ZA17699 None None   V35T, T39E, S48T, K122E, D123S, K166R, K173A, Q174R, D177E, T200A, E204D, Q207D, R211K, V241I, V245Q, A272S, K277R, T286A, K287R, E291D, V292I, I293V  
17716 07ZA17716 None None   V35T, T39E, K122E, D123DG, A158S, K173A, Q174K, D177E, I178IMV, G196MV, T200A, Q207K, R211KQ, W212WG, V245Q, D250E, A272P, V292I, I293V S48IT 
17751 07ZA17751 None None   G18GA, V35T, E36AV, T39E, S48T, V60I, D121Y, K122E, I142T, S162N, K173A, Q174K, D177E, T200A, E203K, Q207E, V245Q, A272P, K277R, Q278N, T286A, E291D, V292I, I293V M16MK, D17DY, G155GE, W239WG 
17854 07ZA17854 None None   V35T, E36AV, T39E, S48T, K122E, D123N, K173T, D177E, T200A, Q207E, R211RK, D218DN, V245K, A272P, K277R, T286A, E291D, V292I, I293V S191SF 
17865 07ZA17865 None None   E6KT, V35T, E36A, T39E, S48T, V60I, K122E, K173A, D177E, T200A, Q207E, R211RK, V245EK, D250E, E291D, V292I, I293V M16MR 
17872 07ZA17872 None None   P4S, K20KR, V35T, E36M, T39E, S48T, K122E, D123S, K173T, T200A, Q207AG, R211K, V245H, A272P, K277KR, Q278H, T286A, E291D, V292I, I293V  
17898 07ZA17898 None None   V35T, E36EA, T39E, S48T, V60I, V118I, K122E, D123N, I135RT, T139A, K166KR, F171Y, K173Q, T200A, Q207EK, R211RK, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293V I63R 

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