Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Papathanasopoulos (2010)
Title Characterization of HIV type 1 genetic diversity among South African participants enrolled in the AIDS vaccine integrated project (AVIP) study.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 35
NumPts 35
Subtype C, CRF18_cpx


Clinical PR Isolates

14998 06ZA14998 None    T12S, I15V, L19V, M36I, R41K, L63P, H69K, L89M, I93L  
15141 06ZA15141 None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, R57K, L63P, H69K, V77I, V82I, L89M, I93L  
15274 06ZA15274 None    T12S, I15V, G16E, L19I, E35D, M36I, R41K, R57K, L63AT, H69KQ, I93L  
16642 06ZA16642 None    T12S, I15V, L19I, M36I, P39AS, R41K, L63P, H69K, L89M, I93L  
16853 06ZA16853 None    T12S, I15V, G16E, L19I, E35D, M36I, R41K, K45KR, H69K, L89M, I93L  
16923 06ZA16923 None    T12S, I15V, G16E, L19T, K20M, E35D, M36I, I62V, L63A, H69K, A71T, I93L  
16938 06ZA16938 None    I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
16976 06ZA16976 None    K14R, I15V, L19I, E35D, M36I, R41K, I64IV, H69K, L89M, I93L  
16985 06ZA16985 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, K70KR, T74A, L89M, I93L  
16997 06ZA16997 None    T12S, I15V, L19I, K20R, E35D, M36I, N37D, I62V, H69K, T74S, L89M, I93L  
17058 06ZA17058 None    K14R, I15V, L19V, E35D, M36I, R41K, L63V, H69K, L89M, I93L  
17067 06ZA17067 None    T12S, I15V, L19I, K20KR, M36I, P39V, R41K, D60E, Q61E, I62V, L63T, H69KR, L89LM, I93L  
17071 06ZA17071 None   V11VI L10V, T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, I93L  
17189 07ZA17189 None    T12S, I15V, L19I, M36I, R41K, H69K, L89I, I93L  
17193 07ZA17193 None    K14I, I15V, L19T, E35D, M36I, R41K, D60E, Q61N, L63M, E65D, H69K, L89M, I93L  
17200 07ZA17200 None    I15V, L19T, M36MI, R41K, L63P, H69K, V77L, L89M, I93L  
17212 07ZA17212 None    M36I, R41K, K45KR, D60E, I62V, L63T, H69K, V82VI, L89LIM, I93L Y59N, N88K 
17241 07ZA17241 None    I15V, G16E, L19I, M36IL, R41K, L63LV, H69K, I72IV, L89M, I93L  
17332 07ZA17332 None    T12S, I15IV, L19V, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
17409 07ZA17409 None    T12S, I15V, G16E, L19I, N37S, L63H, H69K, L89M, I93L  
17462 07ZA17462 None    I15V, L19I, E35D, M36I, R41K, K43I, D60N, L63PS, H69K, T74TS, L89LM, I93L  
17491 07ZA17491 None   Q58E I15V, G17D, L19I, E35D, M36I, R41K, D60E, H69K, I72IK, V82I, L89M, I93L  
17503 07ZA17503 None    T12A, K14R, I15V, G16E, L19I, E35D, M36I, N37D, R41K, K45R, D60E, Q61E, L63S, H69K, L89I, I93L  
17556 07ZA17556 None    K14I, I15V, L19T, K20R, M36I, R41K, H69K, L89M, I93L  
17568 07ZA17568 None    K14R, I15V, L19I, M36I, R41K, L63LP, H69K, L89M, I93L  
17579 07ZA17579 None    I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
17604 07ZA17604 None    T12S, I15V, L19I, K20R, M36I, N37AT, L63P, H69K, K70Q, I72V, V77I, I93L  
17657 07ZA17657 None    T12S, I15V, L19V, N37S, R41K, L63A, H69K, T74A, L89M, I93L  
17699 07ZA17699 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, D60E, L63V, H69K, T74S, L89M, I93L  
17716 07ZA17716 None    E35D, M36I, N37A, R41K, L63PS, H69K, T74TS, L89M, I93L  
17751 07ZA17751 None    L19I, M36K, N37S, R41K, C67W, H69K, L89M, I93L  
17854 07ZA17854 None    T12S, K14R, I15V, L19I, N37NS, R41K, K43R, L63P, H69K, L89M, I93L  
17865 07ZA17865 None    T12S, K14R, I15V, L19I, M36I, R41K, C67CW, H69K, L89M, I93L  
17872 07ZA17872 None    T12S, I15V, G16E, L19I, E35ED, N37S, R41RK, I62IV, L63V, H69K, T74S, L89M, I93L  
17898 07ZA17898 None    T12S, I15V, G16E, L19I, E35D, M36L, R41K, D60E, H69K, V82VI, L89M, I93L