<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Li (2010)
Title Genetic characterization of 13 subtype CRF01_AE near full-length genomes in Guangxi, China.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 13
NumPts 13
Subtype CRF01_AE

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
1 05GX001 Unknown Unknown   E6D, K11T, V35T, T39N, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
12 05GX012 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, T58I, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R, V245E, A272P, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
128 05GX128 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, K311R, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, L452I, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
13 05GX013 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173A, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, L295M, E312T, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, L525V, A534S, A554S T7V 
136 05GX136 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, I375V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
14 05GX014 Unknown Unknown   E6D, K11T, T27TP, V35T, T39K, K43E, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200I, Q207K, R211S, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E404D, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S E36E* 
142 05GX142 Unknown Unknown   E6D, K11T, V35T, T39N, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, T200I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, R307K, E312N, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
156 05GX156 Unknown Unknown   E6D, K11T, V35T, V60I, K122E, D123S, K173T, Q174K, D177E, I178M, T200K, Q207A, R211S, K238R, V245E, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369V, A371V, I375V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, E529D, A534S, A554S  
162 05GX162 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, S68G, K122E, D123S, T139A, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
2 05GX002 Unknown Unknown   E6D, K20R, V35I, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211N, K238R, V245E, V276I, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369A, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
239 06GX239 Unknown Unknown D67N, K70R, V75M, M184V, L210W, T215Y Y181V E6D, K11T, V35T, V60I, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, E203D, Q207S, R211T, K238R, V245E, T286A, I293V, A304T, E312T, V317G, I326V, I329V, G335D, N348T, M357K, G359S, K366R, A371V, K390R, A400T, T403R, E432D, N447S, R461K, Q464K, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
34 05GX034 Unknown Unknown   E6D, K11T, V35T, T39K, K43E, V118I, K122E, D123N, I135T, R172K, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, F214L, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, I375V, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
79 05GX079 Unknown Unknown V75M, F116Y, Q151M, M184I K103N E6D, K11T, V35T, T39K, K43Q, K122E, D123S, I135L, S162C, K173T, Q174K, D177E, I178M, Q207K, R211S, K238R, V245E, K249R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, I375V, A376S, S379C, A400T, T403M, E432D, N447S, D471E, Q480H, H483Y, L491S, K512R, E514D, L517V, S519N, Q524E, E529D, A534S, A554S, K558R  

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