<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Carr (2010)
Title HIV-1 recombinants with multiple parental strains in low-prevalence, remote regions of Cameroon: evolutionary relics?.
Citation Retrovirology
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 23
NumPts 23
Subtype CRF02_AG, A, F, CRF18_cpx, CRF11_cpx

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
0018ND 01CM.0018ND None None   V35T, E36A, K43Q, K49R, V60I, K102E, D123E, I135V, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, V245Q, E248N, K281R, T286A, E291D, I293V, P294T, S322T, G335D, R356K, M357K, R358K, G359S, E370Q, A371V, I375V, T377L, K390R, K395R, T403M, E432D, V435I, L469F, T470P, D471E, Q480H, L491S, K512R, S519N, Q520L, Q524K, K527E, E529D, A534S, A554S K30R 
0096MA 01CM.0096MA None None   V35T, E36D, D123E, S162A, K173T, Q174E, D177E, I178M, T200E, E204Q, Q207A, P243S, V245K, A272P, K277R, T286A, V292I, I293V, E297I, S322E, D324E, I326V, Q334E, R356K, M357R, G359S, A371V, I375V, A376S, K390R, T403M, Q428R, K431T, V435A, R461K, K465R, S468T, L469I, D471E, Q480H, L491S, A502V, K512R, S519N, I522V, Q524E, E529D, A534S, A554S  
0119MA 01CM.0119MA None None   V35T, E36D, T39A, K122A, D123N, I135V, S162A, K173T, Q174R, T200A, Q207E, F214L, V245Q, K277R, T286A, E291D, V292I, I293V, P294T, S322A, G335D, R356K, M357K, G359S, A371V, I375V, T377V, K390R, A400T, T403M, V435I, D471E, Q480H, L491S, E492Q, K512R, L517I, S519N, K527G, E529D, A534S, A554N, V559I  
0126MA 01CM.0126MA None None   V35T, T39S, G45E, D123E, I135V, S162A, K173T, Q174E, D177E, T200A, Q207E, R211K, V245Q, T286A, V292I, I293V, R307K, S322T, G335D, R356K, M357K, G359S, A371V, I375V, K390R, K395R, T403M, E432D, D471G, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554N, K558R  
0144ND 01CM.0144ND None None   V35T, T39A, E40D, D121H, K122E, D123E, S162A, K173A, Q174E, D177K, T200A, Q207E, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357R, G359S, T369A, A371V, T377V, K390R, A400T, T403L, E432D, V435I, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554N, K558R, V559I  
0186BA 01CM.0186BA None None   K20R, V35T, E36D, T39L, K49R, I135V, S162A, K173T, Q174R, D177E, I178M, T200A, R206K, Q207G, R211K, V245Q, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, T403M, E432D, V435I, D471E, Q480H, L491S, E492Q, K512R, L517I, S519N, Q524K, K527E, E529D, A534S, A554N  
0191ND 01CM.0191ND None None   V35T, I135T, S162A, K173A, Q174K, D177E, T200A, Q207E, P243T, V245Q, K249Q, A272P, K281R, T286A, E291D, I293V, P294T, R307K, K311R, S322T, G335D, R356K, M357K, G359S, A371V, I375A, T386I, K390R, I393L, K395R, T403M, E432D, D471E, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554S  
1122MO 01CM.1122MO None None   V21I, V35T, V60I, K122P, D123E, I135V, I142V, I159V, Q174S, D177E, I178L, Q207E, V245Q, S251C, A272P, K281R, T286A, E291D, V292I, I293V, E297A, E312D, I326V, G335D, R356K, M357K, G359S, I375V, T386I, A400T, P421H, K431T, V435A, A446S, L452I, S468H, D471E, T477A, L491A, E492K, A502T, K512R, L517I, S519N, Q520N, Q524E, E529D, A534S, A554N I37K 
1188NG 01CM.1188NG None None M184I G190R V35T, E36N, K49R, W88*, K122E, I135V, S162A, K173T, D177E, Q207A, R211K, W212*, V245Q, W266*, V276I, T286A, E291D, V292I, I293V, P294T, R307K, S322A, G335D, G352R, R356K, M357K, G359S, V365I, T369A, A371V, I375V, W383*, K390R, K395R, W398*, W402*, T403M, W414*, W426*, E432D, G436R, R448K, L452Q, S468T, D471E, Q480H, L491S, G504R, K512R, E514D, S519N, Q520L, Q524K, K527E, E529D, A534S, W535*, A554N, G555R M41I, G45R, G51R, G112K, M230I, G316R, G444K, G453R, G456K 
1362NG 01CM.1362NG None None M184I G190R V35T, E40K, V60I, W71*, W88*, G112E, D123E, I135T, W153*, S162A, K173A, Q174K, D177E, G196E, T200A, E204K, R206K, Q207E, W212*, W229*, V245Q, W252*, W266*, T286A, E291D, I293V, P294T, E297K, R307K, E312D, G335D, W337*, R356K, M357K, R358E, G359S, V365I, A371V, I375V, W383*, K390R, W398*, E399D, W401*, T403I, W406*, W410*, W414*, W426*, E432D, V435I, R448K, R461K, D471K, Q480H, H483Y, L491S, K512R, E514K, L517I, S519N, Q524K, K527E, E529D, A534S, W535*, A554N, G555R, R557K, V559I M16I, G18R, M41I, G45R, G51R, G152R, G155R, G213R, M230I, G231R, G262R, G273E, G285R, E370K, G444K, G456R, G462R 
1402MV 01CM.1402MV None None   V35T, K49R, V60I, D123E, I135T, K173S, V179I, Q207A, V245Q, K275Q, V276T, K277R, E291D, I293V, P294T, E312D, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, K390R, A400T, T403M, E404D, E432D, D471E, L491S, Q509H, L517I, S519H, K527Q, A534S, A554S  
1445MV 01CM.1445MV None None   V35T, T39K, E40D, D121Y, K122E, I142V, T165I, K173T, Q174K, D177E, V179I, T200A, Q207A, V245K, K275Q, K281R, T286A, E291D, V292I, I293V, E297R, A304E, E312N, I326T, G335D, R356K, M357K, G359T, A360T, A376V, T377M, K390R, A400T, K431Q, V466I, D471E, K476R, Q480H, H483Y, L491S, K512R, S519N, Q524E, K530R, V531I, A534S, A554S  
1590LE 02CM.1590LE None None   K11A, V35T, W88*, V90I, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, W212*, W229*, V245Q, E248D, S251N, T286A, E291D, V292I, I293V, P294T, E297K, R307K, E312D, D324N, I326V, G333R, G335D, M357K, G359S, T377I, W383*, T386I, W398*, A400I, W402*, T403M, W414*, W426*, K431T, E432D, V435A, E438K, R448K, D471E, E478K, Q480H, L491S, E492K, A508T, K512R, E514K, S519N, Q524K, E529D, V531I, A534S, W535*, G541E, G544E, A554K, V559I M16I, M41I, G51R, E53K, G93E, G112K, G141E, M230I, E233K, D256N, E302K, G444R 
1710LE 02CM.1710LE None None   D17N, V35T, E36D, T39L, E42K, W71*, K122E, D123N, K166R, E169K, F171Y, R172K, K173T, Q174K, D177E, T200E, E204D, V245K, E248D, D250E, A272P, K275Q, T286A, E291D, V292I, I293V, E297A, I329V, Q334L, G335D, R356K, M357R, G359T, K366R, T369A, A371V, T377L, K390R, K395R, E396D, A400T, E404D, V435I, E449D, L452I, R461K, S468T, D471E, Q480E, E529D, A534S, A554S M41I 
1807LE 02CM.1807LE None None M184I G190R V35T, W71*, W88*, K122D, D123E, W153*, K173A, Q174K, D177E, G196R, R206K, Q207E, R211K, W212*, P243A, V245Q, E248D, W266*, A272P, K275R, Q278H, T286A, E291D, I293V, E297A, L303M, G333R, Q334H, G335D, F346H, R356K, M357R, R358K, G359S, A371V, S379G, W383*, T386I, K390R, W398*, A400T, W406*, W410*, W414*, W426*, K431T, E432D, V435I, D471E, H483Y, L491S, G504R, Q509H, E514K, S519N, K527Q, A534S, W535*, G541R, G544R, A554S G15R, M16I, G18R, M41I, G51R, G93R, G99R, G112K, G152E, G155R, M230I, G231R, G273E, G316E, G444R, G456E 
1895LE 02CM.1895LE None None M184I G190R E6D, K11T, V35T, T39K, K43A, W71*, W88*, D121H, K122E, D123G, I135V, W153*, K173A, Q174K, G196R, Q207A, R211S, W212*, W229*, K238R, W239*, V245L, W266*, V276I, T286A, E291D, V292I, I293V, P294T, R307K, E312N, I326V, G333R, G335D, G352R, M357K, G359S, K366R, E370D, A371V, I375V, T377I, W383*, K390R, K395R, W398*, A400T, W401*, T403I, E404K, W410*, W414*, W426*, E432D, V435I, G444E, N447S, R448K, R461K, D471K, Q480H, H483L, G490R, L491S, G504R, K512R, L517I, S519N, Q524K, A534S, W535*, G543R, G544R, A554S, G555E, I556V G15R, M16I, G18R, M41I, G45R, G51R, G93R, G99E, G141R, G152R, M230I, G231R, G262R, G316R, E413K, G453R, G456E, G541K 
1970LE 02CM.1970LE None None   V35T, T39S, D123E, I135T, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245E, A272P, T286A, E291D, V292I, I293V, P294T, Q334L, G335D, R356K, M357R, G359T, A371V, I375V, T377I, K390R, K395R, T403M, E432D, V435L, R461K, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554S  
2172SA 02CM.2172SA None None   V35T, K104R, K122E, D123G, I135V, S162A, K173T, Q174N, D177E, I178M, T200A, E204K, Q207E, V245Q, Y271F, T286A, A288T, E291D, V292I, I293V, P294T, S322A, I326V, G335D, F346Y, R356K, M357K, R358K, G359S, K366R, A371V, I375V, K390R, T403L, E432D, V435E, A437V, R461K, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554N, V559I  
2848YI 03CM.2848YI None None M184I E138K, G190R V35T, T39K, E40D, V60I, W71*, W88*, K104R, G112E, D123S, W153*, K173T, Q174K, D177E, G196R, T200A, Q207E, W212*, W229*, W239*, V245Q, W266*, K277R, T286A, E291D, V292I, I293V, P294A, R307K, S322T, I326V, G333R, G335D, E344K, R356K, M357R, G359S, I375V, V381I, W383*, K390R, W398*, W402*, T403I, W410*, W414*, W426*, E432D, G436R, R448K, D471E, E478K, Q480H, L491S, G504R, K512R, S519N, Q524K, K527R, E529D, A534S, W535*, G543R, G544R, V548I, A554S, G555R M16I, M41I, G45R, G51R, G93R, G99R, G141R, G155R, M230I, G231R, G444R, G453K, G456K, G462R, G541K 
3153MN 02CM.3153MN None None   V35T, K122E, D123G, S162A, K173T, Q174K, D177E, D192N, Q207A, R211K, V245Q, T286A, E291D, V292I, I293V, S322A, I326V, G335D, R356K, M357K, G359S, K366R, T369V, A371V, I375V, K390R, K395R, A400T, T403M, E432D, V435I, T450S, K454R, D471E, Q480H, H483Y, L491S, K512R, S515L, S519N, Q520L, Q524K, K527E, E529D, A534S, A554R  
3205MN 02CM.3205MN None None   P4S, V35T, V60I, I135V, S162A, K173T, Q174K, D177E, T200A, E204K, Q207E, V245Q, T286A, E291D, V292I, I293V, S322A, I326V, R356K, M357K, G359S, T369V, A371V, I375A, K390R, T403M, E432D, V435I, D471E, Q480H, L491P, K512R, S519N, Q524K, K527E, E529D, A534S, A554S K13R 
3217MN 02CM.3217MN None None   E6D, K11N, K20R, V35T, E36D, K49R, V60I, D121H, I135V, S162A, K173T, Q174K, D177E, T200A, Q207G, R211K, V245Q, E291D, V292I, I293V, P294T, S322T, I326V, G335D, Y342C, R356K, M357K, G359S, A371V, I375V, T403M, V435I, D471E, Q480H, L491S, K512R, S519N, Q520L, Q524E, E529D, V531I, A534S, A554S, I556V  
4038STN 01CM.4038STN None None   E6K, V35T, T39R, K122E, D123S, I135T, K173S, D177E, T200A, Q207A, F214L, V245L, A272P, K275R, T286A, E291D, V292I, I293V, P294T, E312D, S322L, D324E, I326V, G335D, I341L, M357K, G359S, A360T, K366R, T369V, A371V, I375V, A376T, T386I, A400T, T403A, E432D, D471E, H483Y, L491S, K512S, S519N, Q524K, K527G, A534S  

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