<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Baker (2007)
Title HIV subtypes distribution and implication for antiretroviral treatment in a Ugandan population.
Citation J Int Assoc Physicians AIDS Care (Chic)
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 75
NumPts 75
Subtype A, D, CRF01_AE, B

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
0079BS 04-0079BS None None   V35T, V60I, K122E, D123S, K166R, D177E, I178M, T200I, Q207D, R211K, V245Q, E248D, K275Q, K277R, T286A, A288AS, E291D, V292I, I293V, P294V, E312D, I329V  
0351NG 04-0351NG None None  V179D E6K, V35T, T39TI, V60I, V106I, V118I, K122E, D177E, I178M, Q197E, Q207E, F214L, V245E, D250E, A272P, T286A, I293V, S322A  
0535KH 04-0535KH None None   V21I, V35I, T39KQ, V60I, K122E, D123S, I135T, D177E, I178M, T200I, Q207E, R211K, V245Q, A272P, K281R, T286A, E291D  
0567NR 04-0567NR None None   V35I, V60I, K122E, D123S, I135T, I142V, K173A, Q174R, D177E, I178M, Q197L, Q207A, R211S, V245E, E248D, D250E, A272P, K277R, K281R, T286A, E291D, I293V, P294A, E312D, I329V  
0631KS 04-0631KS None None   V35L, E36K, T39K, K43E, K122E, D123G, D177E, I178V, Q207E, R211K, V245K, D250E, A272P, K277R, K281R, L282C, I293V E29ED 
1056KP 01-1056KP None None M41L, L210W, T215Y Y181C, G190A V35T, E44D, K49R, V60I, D121Y, K122E, E169D, D177E, T200I, Q207E, R211K, L228R, V245Q, D250E, K281R, L282C, L283I, T286A, V292I, I293V, H315Q  
1354KP 02-1354KP None None M184V K103S, Y181V V35T, T39A, E40D, K122E, D123S, K173S, D177E, V179I, T200A, Q207A, R211S, H221Y, V245Q, E248D, K275Q, K277R, T286A, E291D, I293V, P294T, K311R, D324E  
1378MJ 01-1378MJ None None K65R  V35T, K49R, V60I, K122E, D123N, K173L, Q174K, D177E, V179I, Q207A, R211S, V245E, D250E, A272P, K287R, I293V, P294A, E297K, E312D, S322A  
300NG 01-300NG None None  V179D, Y188L V35T, T39A, K122E, D123S, K173S, N175H, T200A, Q207A, R211S, V245Q, A272AP, T286A, E291D, V292I, I293V, E312D, S322A, I326V  
6148NJ 03-6148NJ None None   K20R, V35T, V60I, K122E, D123G, I135T, I142V, K173A, D177E, T200A, Q207A, R211S, D250E, A272P, I274V, T286A, E291D, V292T, I293V, P294T, E312D, I329V  
6580SP 03-6580SP None None   V35T, K49R, V60I, K122E, K166I, D177Q, I178M, T200I, Q207E, R211K, V245E, D250E, A272S, V276I, K277R, L282C, L283I, T286A, I293V, I329V  
7289KB 03-7289KB None None   K11Q, V35T, K49R, V60I, K104R, D121Y, K122E, K173S, Q174K, D177E, I202V, Q207A, R211S, P243T, V245K, D250E, A272P, K277R, L282C, T286A, I293V  
800KN 03-800KN None None   P4S, K11T, V21I, V35T, T39K, K49R, V60I, D123N, I135T, E169D, D177E, I202V, Q207A, R211K, P243A, V245K, D250E, A272S, K277R, L282C, T286A, V292I, I293V, E297V  
9073NR 03-9073NR None None   V35T, T39K, K122E, D123S, A158S, K173S, N175H, T200A, Q207A, R211S, V245Q, K277R, T286A, E291D, V292I, I293V, E312D, S322A, I326V  
9146NM 03-9146NM None None   K11T, K20R, V35T, K49R, V60I, K122E, D123N, I135T, E138A, K173S, Q174K, D177E, I178IV, V179I, T200A, Q207A, R211S, F214L, V245Q, A272P, K281R, T286A, E291D, I293V, P294PA, E312D, I326V  
9167NS 03-9167NS None None   K11T, V35T, K122E, D123N, K173S, Q174K, D177E, V179I, Q207A, R211S, V245Q, E248D, I293V, P294T, E312D, D324E  
9240KR 03-9240KR None None   V35T, E40D, K49R, V60I, D121H, K122E, T165I, D177E, T200I, Q207E, R211K, V245K, D250DE, A272S, K277R, Q278H, L282C, L283I, I293V, I329V  
9366WG 03-9366WG None None   K11T, V35T, S48T, V60I, K122E, D123N, I135T, K173S, V179I, T200TI, Q207A, L210LM, R211S, F214L, V245Q, E248N, I293V, P294T, E312D  
9410NS 03-9410NS None None   V21I, V35T, T39G, K122E, D123S, K173S, Q174K, V179I, T200A, I202V, Q207A, R211K, P243S, V245Q, E248D, T286A, E291D, V292I, I293V  
9412NS 03-9412NS None None   I5V, K20R, V35T, K49R, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, I244V, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, E312N, S322A  
9454KI 03-9454KI None None   V35T, K49R, V60I, D121C, K122E, D177E, I178M, T200I, Q207E, R211K, V245KQ, D250E, L282C, T286V, I329V  
9456KM 03-9456KM None None   K11T, K20R, V35T, T39R, K122E, D123N, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q, E248N, A272P, K281R, T286A, E291D, V292I, I293V, P294T, E312D, A327V  
9538NG 03-9538NG None None   V35T, V60I, K122E, D123G, I135T, K173A, Q174K, D177E, V179I, Q207A, R211S, V245E, D250E, T286A, E291D, V292I, I293V, E312D  
9593OA 02-9593OA None None V75I, M184V K103N I31L, K32R, V35IM, T39N, E40D, V60I, K102Q, I142V, S162A, K173S, Q174K, D177E, V179I, I202V, Q207A, R211S, D250E, A272P, K277N, Q278QR, T286A, V292I, I293V, P294T, I329V  
9997NM 999-7NM None None   V21I, K32E, V35T, E36G, K122E, D123G, I135T, K173AS, D177E, V179I, Q207A, V245Q, A272P, K275KN, V276I, L283LI, T286A, E291D, I293V, E312D, Q334K  
A1013 MBA1013-090805 None None   K11Q, V35T, E40D, K49R, V60I, D121H, K122E, K166R, I178M, Q207E, R211K, V245T, D250E, A272S, K277R, L282C, L283I, T286A, I293V, E297G  
A1014 MBA1014-090805 None None   E6ED, V35T, V60I, K122KQ, D123DE, D177E, T200TI, Q207E, R211K, V245K, D250E, K281R, L282C, L283I, T286A, A288T, I293V  
A1019 MBA1019-170805 None None   P4T, K11N, V35T, T39TK, V60I, D121H, K122E, I135T, T165TI, Q207E, R211K, I244V, V245Q, A272Q, T286A, V292I, I293V  
A1021 MBA1021-170805 None None   V35T, E40D, V60I, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245M, D250E, T286A, E291ED, I293V, P294PT, E312N L26W 
A1023 MBA1023-180805 None None   I5V, V35T, V60I, K173S, D177E, I202V, Q207A, R211K, V245Q, E248D, D250E, A272P, K277R, L282C, L283I  
A1025 MBA1025-180805 None None   S48T, V60I, K122E, D123S, K173L, Q174K, D177E, V179I, Q207A, R211S, V245VM, A272P, K281R, T286A, E291D, V292I, I293V, P294T, E312D  
A1028 MBA1028-230805 None None   K20R, V21I, V35T, T39A, V60I, K122E, D123G, I135T, S162C, K173LS, Q174K, D177E, Q207A, R211S, V245M, D250E, A272P, T286A, E291D, I293V, L295F, E312D P294IR 
A1030 MBA1030-240805 None None   K20R, V35T, T39A, E40ED, V60I, D121Y, K122E, D123E, I159V, D177E, T200I, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, T286V, I293V, E297K, K311R  
A1031 MBA1031-240805 None None   E6D, V35T, T39A, E40D, I47L, K49R, V60I, K122E, D123G, K173N, D177E, T200I, Q207G, R211K, V245K, A272P, L282C, L283I, T286A, A288T, I293V, P313T  
A1035 MBA1035-310805 None None   D123S, I135T, I142V, K173S, D177E, V179I, Q207A, R211S, V245M, E248D, A272P, K277R, E291D, I293V, P294T, E312D  
A1037 MBA1037-060905 None None   V35T, E40D, K49R, V60I, K122E, D123S, I135T, K173A, Q174K, D177E, I178IV, V179I, G196E, Q207A, R211RS, V245T, D250E, K275R, V276I, T286A, E291D, I293V, P294T, E297K, E312D  
A1039 MBA1039-190905 None None   V8I, V35T, K49R, V60I, D121H, K122E, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, A272Q, L282C, I293V, E312K  
A1040 MBA1040-190905 None None   K20R, V35T, T39Q, V60I, D121DY, K122E, I135T, K166R, Q174E, D177E, Q207E, R211K, V245E, D250E, A272P, K277R, T286A, I293V, E297K  
A1043 MBA1043-200905 None None   V35T, T39TA, V60I, K122E, D123E, D177E, Q207E, R211K, V245E, D250E, A272P, K277R, L282C, I293V S48*EQ, L283IV 
A1044 MBA1044-200905 None None   K11KI, V35T, T39TA, S48PQ, V60I, K122E, D123E, D177E, Q207E, R211K, V245E, D250E, A272P, K277R, L282C, L283I, I293V, D320X K13K*LM, K22I 
A1050 MBA1050-171005 None None   V35T, T39K, E40A, K43E, V60I, D121H, K122E, D123E, I142T, K166R, D177E, I178M, T200A, Q207E, R211K, V245E, E248D, D250E, A272P, K275Q, K277R, Q278H, L282C, I293V  
A1051 MBA1051-201005 None None   T7TP, V35T, T39K, K43E, K122E, D123N, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, A272P, K277R, L282C, L283I, T286A, I293V  
A1053 MBA1053-201005 None None   E6D, V35T, V60I, K122E, D123S, I135T, E138A, S162Y, K173S, Q174K, D177G, V179I, Q207DE, R211S, F214L, V245Q, D250E, T286A, E291D, I293V, P294T, E312D, P321S  
A1055 MBA1055-261005 None None   V35T, E44D, V60I, D121H, K122E, I135T, I142V, Q174E, D177E, I178M, T200A, Q207A, R211S, V245Q, A272P, K277R, L282C, T286V, I293V, E297A  
A1059 MBA1059-081105 None None   K22X, Q23X, I31X, V35T, K49R, V60I, D121Y, K122E, D177E, T200IM, R211K, V245K, D250E, A272S, L282C, L283I, E308V  
AR005 MBAR005-120405 None None   E6D, V35T, K49R, I50V, E53D, V60I, K122Q, D123S, I135T, I142L, K173S, Q174K, D177E, I178L, T200A, Q207E, R211K, F214L, V245E, D250E, T286A, E291D, V292I, I293V, P294T, E312D  
AR006 MBAR006-120405 None None   V35T, V60I, K122E, D123NS, I142V, D177E, E194D, T200I, Q207E, R211K, V245T, D250E, S251D, A272P, L282C, R284K, T286A, I293V, E297A  
AR007 MBAR007-120405 None None   V35T, T39N, K122E, D123N, A158S, K173A, N175H, I178M, V179I, T200A, Q207A, R211S, V245Q, T286A, E291D, I293V, P294T, E297K, E312D  
AR012 MBAR012-140405 None None   E28A, V35T, K49R, I50V, E53D, V60I, K122E, D123S, I135T, D177E, I178M, Q207E, R211K, V245K, D250E, A272S, V276I, K277R, L282C, T286A, V292I, I293V  
AR016 MBAR016-020505 None None   K11T, K20R, V21I, V35T, D123N, T165I, K173S, D177G, V179I, T200A, I202V, Q207D, V245Q, E248N, A272G, K277R, T286A, E291D, I293V, P294T  
AR017 MBAR017-030505 None None   K11T, K20R, V21I, V35T, T39K, K43E, K122E, D123N, K173L, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q, E248N, T286A, A288S, E291D, I293V, E312D, V317A  
AR019 MBAR019-260505 None None   E28K, K32E, V35T, T39K, I50V, V60I, I135L, I142T, V179I, Q207G, R211K, V245T, D250E, A272S, L282C, T286A, V292VI, I293V, K311R  
P0006 P0006-120105 None None   V35T, V60I, K122E, I135T, Q174N, D177E, I178M, Q207EK, V245K, D250E, A272P, T286A, E297A  
P0018 P0018-240105 None None   V35I, K43KN, K122E, D123S, I135T, I142V, Q174K, D177E, I178V, V179I, T200A, Q207D, R211K, V245Q, A272P, K275R, L282C, L283I, V292I  
P0034 P0034-090205 None None   V35T, T39K, K122E, D123S, A158S, K173A, T200E, Q207A, R211K, V245Q, D250E, S251H, A272S, T286A, E291N, V292I, I293V, P294T, E312D  
P0043 P0043-160205 None None   V35T, K49R, E53D, V60I, D121H, K122E, I135V, D177E, I178M, T200I, Q207G, R211K, V245M, D250E, A272S, K277R, L282C, T286A  
P0048 P0048-230205 None None   E6D, V35T, K49R, V60I, A158S, T165I, D177E, T200V, Q207E, R211K, V245E, V276I, K277R, L282C, T286A, I293V, E297K  
P0054 P0054-020305 None None   V35T, V60I, K122E, D123S, I135T, I142V, K173L, Q174K, D177E, V179I, Q207A, R211S, V245E, D250E, A272P, T286A, I293V, P294T, E312D, V317A  
P0060 P0060-070305 None None   E6N, K20R, V35T, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, I202V, Q207D, R211S, V245M, D250E, T286A, E291D, V292I, I293V, P294T, K323E E312Y 
P0062 P0062-070305 None None   V35K, T39A, V60I, D121DHN, K122E, I135T, D177E, I178M, T200I, Q207E, R211RK, V245K, A272P, I274V, V276T, L282C, T286V, K287R, I293V, E297K  
P0079 P0079-160305 None None   V35T, V60I, K122E, D123S, I135T, I142V, S162A, K173S, Q174K, D177E, I178L, V179I, Q207A, R211S, V245K, E248D, D250E, A272P, K281R, T286A, A288G, E291D, V292I, I293V, P294T P133H 
P0086 P0086-230305 None None   V35T, E42K, K43R, E44K, G45E, V60I, K122E, T139V, D177E, I178M, T200I, Q207E, R211K, V245K, K249Q, D250E, A272P, K277R, L282C, I293V G273R 
P0110 P0110-120405 None None   E6Q, K20R, V21I, V35T, T39K, K122E, K173S, D177E, V179I, I202V, Q207A, R211S, V245Q, T286A, E291D, V292I, I293V, P294S, E312D  
P0166 P0166-250505 None None T215D  P4S, K11T, I31L, V35T, E36D, T39R, V118I, D123N, T165I, D177E, I178L, I202V, Q207A, R211S, I244V, V245Q, E248D, A272S, K277R, T286A, E291D, V292I, I293V, P294T, K311R, E312N  
P0169 P0169-300505 None None  V179E I5V, V35T, T39L, V60I, K122E, D123N, I135T, S162C, E169D, D177E, T200I, Q207E, V245Q, D250E, A272P, K277R, T286A  
P0185 P0185-130605 None None   E6D, V35T, T39K, V60I, K122E, D123N, I135T, I142T, K173L, Q174K, V179I, I202V, Q207A, R211S, F214L, V245T, V261I, T286A, V292I, I293V, P294T, D324E  
P0218 P0218-130705 None None   V35T, D121N, K122E, D123N, A158S, K173S, T200A, Q207A, R211S, V245Q, E248D, S251C, T286A, E291D, V292I, I293V, P294T, E312D  
P0219 P0219-130705 None None   V35T, V60I, D121C, K122E, D177E, I178M, T200M, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, L283I, I293V, E297A  
P0247 P0247-080805 None None   V35T, K49R, V60I, D121H, K122E, Q145H, D177E, I178M, Q207E, P243H, V245E, D250E, K277R, L282C, L283I, T286V, I293V  
P0285 P0285-070905 None None   I5V, E6D, V35T, T39R, E40D, I47L, K49R, V60I, D121Y, K122E, T139K, D177E, I178MV, T200TI, I202V, Q207E, R211K, I244V, V245T, E248Q, A272P, L282C, L283I  
P0289 P0289-140905 None None   I5V, K11T, K20R, V35T, T39R, K43T, K49R, V60I, K102Q, K122E, D123N, I135T, K173S, Q174R, D177E, V179I, T200A, I202V, Q207A, R211S, F214L, V245Q, E248N, T286A, E291D, V292I, I293V, P294T  
TC0251 TC025104 None None   V35T, T39N, K122E, D123N, A158S, K173S, T200A, Q207A, R211S, P243A, V245Q, D250E, S251H, T286A, E291D, V292I, I293V, P294T, E312D, I326V  
TC0255 TC025504 None None   K11T, K20R, V35T, V60VI, T165I, D177E, I178M, T200I, Q207E, R211K, V245Q, E248D, K277R, T286A, E291D, V292I, I293V  
TC0257 TC025704 None None   V35I, K49R, V60I, D121Y, K122E, I135T, E169D, D177E, I178M, T200TI, Q207G, R211RK, D250E, A272P, K275Q, K277R, L282C, L283I, T286A, V292I, I293V  
TC0262 TC026204 None None   V35T, K122E, D123S, I135V, S162T, T165I, K173T, D192N, T200A, I202V, Q207A, R211K, V245K, D250E, A272P, K277N, L282C, L283I, R284K, T286A, V292I, I293V, E297A, L301F, I329V  

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