<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Nwobegahay (2012)
Title Low prevalence of transmitted genetic drug resistance in a cohort of HIV infected naïve patients entering antiretroviral treatment programs at two sites in northern South Africa.
Citation J Med Virol
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 80
NumPts 80
Subtype C, CRF01_AE

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
BBCR04ZA BBCR04ZA None    T12S, I15V, L19I, E35D, N37D, R41K, D60E, Q61E, L63P, C67Y, H69K, V77I, L89M, I93L  
BBCR05ZA BBCR05ZA None    T12S, I15V, L19I, M36I, R41K, L63T, H69K, I93L  
BBCR06ZA BBCR06ZA None    I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
BBCR07ZA BBCR07ZA None    T12S, I15V, L19I, M36I, L63P, H69K, L89M, I93L  
BBCR13ZA BBCR13ZA None    T12S, I15V, L19V, M36I, R41K, H69K, L89M, I93L  
BBCR14ZA BBCR14ZA None    T12S, K14R, I15V, L19T, K20R, R41K, L63P, H69K, V77I, L89M, I93L  
BBCR15ZA BBCR15ZA None    K20R, M36I, N37D, R41K, R57K, D60E, Q61E, L63P, H69K, L89M, I93L  
BBCR16ZA BBCR16ZA None    T12S, I15V, L19I, K20R, M36L, N37S, R41K, L63P, H69K, V77I, V82I, L89M, I93L  
BBCR17ZA BBCR17ZA None    T12S, I15V, Q18R, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
BBCR19ZA BBCR19ZA None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
BBCR23ZA BBCR23ZA None    T12S, I15V, L19I, M36I, N37D, R41K, L63S, I64L, H69K, I93L  
BBCR24ZA BBCR24ZA None    T12S, L19I, K20R, L24F, N37S, R41K, L63P, H69K, V77I, L89M, I93L  
BBCR25ZA BBCR25ZA None    I13L, Q18P, L19V, M36I, R41K, D60E, L63S, H69K, L89M, I93L T12F, I15E, G16K 
BBCR26ZA BBCR26ZA None    T12S, K14R, I15V, L19I, K20R, M36I, R41K, L63P, H69K, V77I, L89M, I93L  
BBCR28ZA BBCR28ZA None    I15V, L19I, M36I, R41K, K45R, D60E, Q61E, L63P, C67S, H69K, K70Q, I72V, L89M, I93L  
BBCR29ZA BBCR29ZA None    T12S, I15V, L19I, K20R, E35N, N37E, R41K, D60E, L63S, H69K, V77I, V82I, L89M, I93L  
BBCR30ZA BBCR30ZA None    T12S, I15K, L19I, E35D, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
BBCR31ZA BBCR31ZA None   V11I T12S, I15V, L19I, N37K, R41K, D60E, Q61E, L63P, H69K, L89M, I93L A22S, L23F, T26P, G27R, A28S, D29N, M36Y 
BBCR34ZA BBCR34ZA None    T12S, I15V, L19I, N37S, L63P, H69K, V77I, L89M, I93L  
BBCR36ZA BBCR36ZA None    T12S, I15V, L19I, E35D, M36I, P39Q, R41K, D60E, Q61D, L63P, H69K, L89M, I93L  
BBCR38ZA BBCR38ZA None    T12S, I15K, L19I, K20R, M36I, N37D, R41K, L63C, H69K, I93L  
BBCR39ZA BBCR39ZA None    T12S, L19V, L63P, H69K, V77I, L89M, I93L  
BBCR40ZA BBCR40ZA None    I15V, L19I, M36I, R41K, L63P, I64L, H69K, L89M, I93L  
BBCR41ZA BBCR41ZA None    T12S, L19I, K20R, M36I, R41K, D60E, Q61E, I62V, L63S, H69K, I93L  
BBCR42ZA BBCR42ZA None    T12S, I15V, L19I, E35D, M36I, N37E, R41K, D60E, Q61E, L63A, H69K, L89M, I93L  
BBCR43ZA BBCR43ZA None    I15V, G16E, L19I, M36I, R41K, D60E, H69K, L89M, I93L  
BBCR45ZA BBCR45ZA None    I15V, M36I, R41K, L63P, H69K, L89M, I93L  
BBCR47ZA BBCR47ZA None    T12S, K14R, I15V, L19I, K20R, M36I, R41K, Q61H, H69K, V77I, L89M, I93L  
BBCR48ZA BBCR48ZA None    T12S, I15V, L19T, K20R, M36I, R41K, L63P, H69K, V77I, I93L  
BBCR50ZA BBCR50ZA None    T12S, I15V, L19T, K20R, E35D, M36I, R41K, K43R, L63P, H69K, I93L  
BBCR51ZA BBCR51ZA None    T12L, I15V, L19V, M36L, R41K, D60E, L63P, H69K, I93L  
BBCR53ZA BBCR53ZA None    T12S, I13V, L19I, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L  
BBCR54ZA BBCR54ZA None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L  
BBCR55ZA BBCR55ZA None    T12P, I15V, L19I, K20R, M36I, N37Q, I62V, L63T, H69K, L89M, I93L  
BBCR56ZA BBCR56ZA None   I54F T12I, I15V, L19I, E35D, M36I, R41K, Q61E, L63P, H69K, T74S, L89M, I93L  
BBCR57ZA BBCR57ZA None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
BBCR58ZA BBCR58ZA None    T12S, K14R, I15V, L19I, L38W, D60E, Q61E, L63P, H69K, L89M, I93L  
BBCR59ZA BBCR59ZA None    T12S, I15V, L19I, K20R, M36I, R41K, R57K, L63T, H69K, I93L  
BBCR60ZA BBCR60ZA None   G48E E34K, E35N, M36I, N37K, R41K, L63T, H69K, L89M, I93L G40E, G49E, Q61T, I62N 
BBCR61ZA BBCR61ZA None    T12S, I15V, L19I, E35D, M36I, N37D, R41K, K45R, L63P, H69K, L89M, I93L  
BBCRO1ZA BBCRO1ZA None    L10I, T12S, I15V, L19V, E35D, M36I, R41K, K45R, D60E, I62V, H69N, V82I, L89M, I93L  
MC01ZA MC01ZA None    T12S, I15V, L19I, M36I, N37T, R41K, L63S, H69K, L89M, I93L  
MC02ZA MC02ZA None    T12S, I15V, L19I, K20R, M36I, P39Q, R41K, Q61N, L63Q, H69K, L89M, I93L  
MC03ZA MC03ZA None    T12S, I15V, L19V, M36L, N37S, L63P, H69K, L89M, I93L  
MC04ZA MC04ZA None    G17D, L19T, K20R, M36I, R41K, H69K, L89M, I93L  
MC05ZA MC05ZA None    T12S, I15V, L19T, K20R, E35D, M36I, N37D, R41K, D60E, H69K, L89M, I93L  
MC07ZA MC07ZA None    T12S, I15K, L19T, K20R, M36I, R41K, I62V, L63S, H69K, L89M, I93L  
MC10ZA MC10ZA None    T12S, I15V, L19T, K20R, M36I, N37S, R41K, L63P, H69K, V77I, L89M, I93L  
MC11ZA MC11ZA None    T12S, I15V, L19I, N37T, R41K, R57K, D60E, Q61E, L63Q, E65D, H69K, V77I, L89M, I93L  
MC13ZA MC13ZA None    I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
MC14ZA MC14ZA None    M36I, R41K, L63T, H69K, L89M, I93L  
MC15ZA MC15ZA None    I15V, L19I, R41K, R57K, I64L, H69K, V77I, L89M, I93L  
MC17ZA MC17ZA None    I15V, L19T, M36I, R41K, H69K, L89M, I93L  
MC19ZA MC19ZA None    T12S, I15V, L19I, M36I, L63P, H69K, L89M, I93L  
MC21ZA MC21ZA None    I15V, L19T, N37S, R41K, L63A, H69K, V77I, L89M, I93L  
MC24ZA MC24ZA None    K14R, I15L, L19I, M36I, R41K, D60E, I62V, L89M, I93L  
MC25ZA MC25ZA None    I15V, M36I, R41K, D60E, L63F, H69K, L89M, I93L  
MC27ZA MC27ZA None    H69K, L89M, I93L  
MC29ZA MC29ZA None    T12S, I15V, L19I, M36I, R41K, L63S, H69K, I93L  
MC30ZA MC30ZA None    I15V, L19V, N37S, D60E, L63P, H69K, T74A, V77I, L89M, I93L  
MC31ZA MC31ZA None    T12S, K14R, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
MC32ZA MC32ZA None    I15V, L19T, M36I, R41K, H69K, T74S, L89M, I93L  
MC33ZA MC33ZA None    I15V, L19V, M36I, R41K, L63P, H69K, I72M, L89M, I93L  
MC34ZA MC34ZA None    T12S, I13N, L19I, M36I, N37E, H69K, L89M, I93L  
MC35ZA MC35ZA None    T12S, I15V, G16E, L19V, K20R, M36I, R41K, Q61H, L63Q, H69K, K70Q, L89I, I93L P39K 
MC36ZA MC36ZA None    T12S, I15V, L19I, E35D, M36I, R41K, K45R, L63I, H69K, V82I, L89M, I93L  
MC37ZA MC37ZA None    T12S, I13N, I15V, L19T, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, L89M, I93L  
MC39ZA MC39ZA None    T12Q, I15V, L19I, R41K, K43I, D60N, L63P, H69K, I93L T4L, W6~, V11S, I13Y 
MC40ZA MC40ZA None    T12S, I15V, L19I, E35D, M36I, R41K, H69K, V82I, L89M, I93L  
MC41ZA MC41ZA None    T12S, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
MC42ZA MC42ZA None    T12P, I15V, L19I, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L  
MC43ZA MC43ZA None   V11I T4I, L10M, T12S, K14R, I15V, L19T, E35D, M36I, N37E, R57K, L63V, H69K, L89M, I93L  
MC44ZA MC44ZA None    L5F, I15V, L19I, M36I, R41K, L63T, H69K, I93L  
MC45ZA MC45ZA None    W6S, Q7K, T12S, I15V, L19I, M36I, R41K, L63T, H69K, K70R, I72V, T74S, L89M, I93L  
MC46ZA MC46ZA None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63V, H69K, L89M, I93L  
MC47ZA MC47ZA None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L K14L 
MC48ZA MC48ZA None    T12S, I15V, L19I, K20R, M36I, R41K, L63P, H69K, V77I, L89M, I93L  
MC49ZA MC49ZA None    T12S, I15V, L19I, K20R, M36I, R41K, Q61E, I62V, H69K, I93L  
MC50ZA MC50ZA None    I15V, M36I, N37T, R41K, L63P, H69K, L89M, I93L  
MC51ZA MC51ZA None   M46V Q2K, T4I, T12S, K14S, I15V, G16E, L19V, K20R, M36I, Q61E, L63T, H69K, I72T, L89M, I93L L23F 

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