<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Nwobegahay (2011)
Title Prevalence of drug-resistant mutations in newly diagnosed drug-naive HIV-1-infected individuals in a treatment site in the Waterberg district, Limpopo province.
Citation S Afr Med J
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 55
NumPts 55
Subtype C, B


Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
BBVCT01ZA BBVCT01ZA None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, D177E, T200A, E204K, Q207E, V245T, A272P, T286A, E291D, V292I, I293V, P321S, D324E, G335D, R356K, M357R, G359T, T369A, T377M, K388R  
BBVCT02ZA BBVCT02ZA None None   V35T, E36A, T39E, S48T, V60I, V90I, K122E, D123G, K173A, D177E, T200A, E204K, Q207E, V245T, A272P, T286A, E291D, V292I, I293V  
BBVCT04ZA BBVCT04ZA None None   V35T, T39E, S48T, K82R, A98S, K122E, I135K, K173A, Q174K, D177E, V179I, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, L283I, V292I, I293V, Q334D, G335D, R356K, M357K, G359T, K366R, A371V, I375A, T377Q, T386I, A400L, E404D  
BBVCT05ZA BBVCT05ZA None None   V35T, S48T, V60I, K122E, D123N, T165I, K173A, D177E, T200A, Q207E, V245Q, S251N, A272R, R284K, T286A, E291D, V292I, I293V, D324E, Q334N, G335D, R356K, M357R, G359T, T369A  
BBVCT06ZA BBVCT06ZA None None   T27S, V35T, E36A, T39E, S48T, K122E, D123G, K173A, D177G, T200A, Q207E, V245Q, D250E, K281R, T286A, E291D, V292I, I293V, P294T, Q334H, G335D, R356K, G359T, T377M, S379C, K390R, A400T, E404D I37V 
BBVCT07ZA BBVCT07ZA None None   P4S, V35T, T39E, S48T, V60I, K122E, K173A, D177E, I178M, T200A, Q207E, R211K, V245Q, D250E, A272P, K277R, Q278N, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T377M, K390R, A400T, E404D, E413D, V435A  
BBVCT09ZA BBVCT09ZA None None   V35T, T39E, S48T, K82R, A98S, K122E, I135K, Y144F, K173A, D177E, V179I, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, V292I, I293V Q145K 
BBVCT10ZA BBVCT10ZA None None   V35T, T39D, S48T, V60I, K122E, D123S, K173T, D177E, I178L, G196E, T200E, E204K, Q207D, R211K, V245Q, A272P, E291D, V292I, I293V  
BBVCT11ZA BBVCT11ZA None None   V35T, T39E, S48T, V60I, K122E, E138A, I142V, K173A, Q174K, D177E, T200A, Q207K, R211Q, V245Q, A272P, E291D, V292I, I293V  
BBVCT12ZA BBVCT12ZA None None   V35T, E36A, T39E, S48T, K122E, I135V, K173A, Q174K, D177E, T200A, Q207D, R211K, V245Q, A272P, K275R, Q278H, E291D, V292I, I293V  
BBVCT13ZA BBVCT13ZA None None   K32N, V35T, T39E, S48T, V60I, K122E, I135R, E169A, K173E, D177E, I202V, Q207K, R211K, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V  
BBVCT14ZA BBVCT14ZA None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173T, D177E, T200A, Q207E, V245K, K275Q, E291D, V292I, I293V Y319L, D320T 
BBVCT15ZA BBVCT15ZA None None  Y181C V35T, T39E, S48T, K82R, A98S, K122E, I135K, K173A, Q174K, D177E, V179I, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, L283I, V292I, I293V W71S, R72G, L193I 
BBVCT16ZA BBVCT16ZA None None   V35T, E36A, T39E, S48T, K102Q, K122E, D123S, I142V, S162C, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, L228H, V245Q, E248D, S251C, A272P, K277R, T286A, E291D, V292I, I293V, D320N Y319L 
BBVCT17ZA BBVCT17ZA None None   V35T, T39E, S48T, V60I, K122E, D123G, S163T, K173T, Q174K, D177E, T200A, R211K, V245K, A272P, K277R, T286A, E291D, V292I, D320N Y319L 
BBVCT18ZA BBVCT18ZA None None   K20R, V35T, E36A, T39E, S48T, V60I, K122E, D123N, K173A, Q174K, D177E, T200A, Q207E, V245Q, K277R, E291D, V292I, I293V  
BBVCT19ZA BBVCT19ZA None None  V179D V35K, T39E, S48T, D86E, V118I, K122E, D123N, E138A, K166Q, E169Q, K173M, Q174K, T200A, Q207E, R211K, F214L, V245Q, E248D, A272P, K275R, K277R, Q278H, T286A, E291D, V292I, I293V, L310I, D320E  
BBVCT20ZA BBVCT20ZA None None   V35T, T39A, S48T, K122E, D123G, K166R, K173T, D177E, T200A, Q207N, R211K, V245Q, E248T, A272P, K277R, E291D, I293V, T296N  
BBVCT21ZA BBVCT21ZA None None   V35T, T39A, S48T, K122E, D123G, K166R, K173T, D177E, T200A, Q207N, R211K, V245Q, E248T, A272P, K277R, E291D, I293V, T296N  
BBVCT23ZA BBVCT23ZA None None   G18A, V35T, T39A, S48T, K122E, D123G, K166R, K173T, D177E, T200A, Q207N, R211K, V245Q, E248T, A272P, K277R, E291D, I293V, T296N D17I 
BBVCT25ZA BBVCT25ZA None None   V8I, V21I, V35K, E36K, T39E, S48T, E53D, V60I, K104R, T139Q, S162Y, K173A, T200A, Q207K, R211K, V245Q, D250E, A272P, T286A, E291D, I293V K32L 
BBVCT26ZA BBVCT26ZA None None   I5M, E6K, V35T, T39E, K122V, D123N, K173E, Q174R, D177E, I178L, T200A, Q207E, R211K, V245Q, E248Q, A272P, K277R, T286A, E291D, V292I, I293V, P294Q, P313T Y144S, Q145K 
BBVCT27ZA BBVCT27ZA None None   V35T, E36A, T39E, S48T, V60I, A98S, K122E, D123S, A158S, K173A, Q174K, D177E, T200A, Q207G, R211K, V245Q, D250E, A272P, K277R, T286A, V292I, I293V, E297A  
BBVCT30ZA BBVCT30ZA None None   K32E, V35T, E36A, T39E, S48T, V60I, V118I, K122E, D123G, I135R, K166R, K173A, D177E, T200A, Q207E, R211K, F214L, V245Q, A272S, K281R, T286A, E291D, V292I, I293V, V314A, Q334H, G335D, F346Y, R356K, G359T, T377L, K390R, A400T, E404D  
BBVCT31ZA BBVCT31ZA None None   K102Q, V118I  
BBVCT32ZA BBVCT32ZA None None   V35T, T39E, S48T, K82R, A98S, K122E, I135K, T139I, K173A, Q174K, D177E, V179I, T200A, Q207E, R211K, V245Q, D250E, S251D, A272P, L283I, V292I, I293V Y144T, Q145K, Q161H 
BBVCT35ZA BBVCT35ZA None None   P4S, V35T, T39E, S48T, V60I, K122E, D123S, K173T, Q174K, D177E, T200A, Q207A, R211K, V245Q, A272P, K277R, L283I, V292I, I293V, G335D, R356K, G359T, T377Q, K390R, A400T, E404D  
BBVCT36Z BBVCT36Z None None   V35T, T39E, S48T, K122E, D123N, I135T, K173M, Q174K, T200A, Q207K, R211K, F214L, V245Q, A272P, K277R, L283I, K287R, I293V, P294T  
BBVCT37ZA BBVCT37ZA None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, I142T, K173A, Q174R, D177E, I178L, T200A, Q207N, R211K, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V  
BBVCT38ZA BBVCT38ZA None None   V8I, V35T, T39E, S48T, E53D, V60I, K122E, D123N, I135V, K173A, Q174K, D177E, T200A, Q207E, R211K  
BBVCT39ZA BBVCT39ZA None None   V35T, E36A, T39D, S48T, V60I, K122E, D123G, E138A, K173T, Q174K, V179I, T200A, Q207D, R211K  
BBVCT40ZA BBVCT40ZA None None   E6N, V35T, T39E, K43R, S48T, K122E, I135M, S162C, K173A, Q174K, D177E, T200A, Q207E, V245Q, E248D, I274L, K277R, T286A, E291D, V292I, I293V, V317A, Q334H, G335D, R356K, G359T, T369A, I375V, T377L, T386I, K390R, A400T, E404D, V435A  
BBVCT42ZA BBVCT42ZA None None   V35T, E36A, T39E, S48T, K122E, D123S, K173A, D177G, T200A, Q207E, R211K, V245Q, E248D, A272P, K277R, K281R, T286A, I293V  
BBVCT43ZA BBVCT43ZA None None   P4S, V35T, E36A, T39E, S48T, E169Q, K173T, Q174K, T200A, I202V, Q207E, R211K, P243A, V245K, A272P, Q278Y, R284K, T286A, E291D, V292I, I293V G273R 
BBVCT44ZA BBVCT44ZA None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, Q174K, D177E, I178V, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V T131S 
BBVCT46ZA BBVCT46ZA None None   K166R, K173T, D177E, T200A, Q207N, R211K, V245Q, E248K, A272P, K277R, E291D, I293V, T296N, D320N Y319L 
BBVCT49ZA BBVCT49ZA None None   P4S, G15E, V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, E300D A299T 
BBVCT50ZA BBVCT50ZA None None   V35I, E36A, T39E, S48T, K122E, D123G, D177G, T200A, Q207E, V245K, D250E, E291D, V292I, I293V, E300D  
BBVCT51ZA BBVCT51ZA None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P  
BBVCT53ZA BBVCT53ZA None None   V35T, T39E, S48T, A98S, K122E, T139A, K173A, Q174K, D177E, T200A, Q207E  
BBVCT55ZA BBVCT55ZA None None   K20R, V35T, E36A, T39E, V60I, K104R, V118M, K122E, D123S, I135T, S162G, K173A, D177E, I178V, T200A, I202V, Q207E, R211K, F214L, V245Q, A272P, E291D, V292I, I293V  
BBVCT56ZA BBVCT56ZA None None   V35T, T39E, S48T, K122E, D123N, K166R, K173A, D177G, T200A, I202V, Q207E, R211K, V245Q  
BBVCT58ZA BBVCT58ZA None None   V8I, E28A, V35T, E36A, T39E, S48T, K122E, D123N, T139A, I142V, K173A, Q174K, D177E, I178L, T200A, Q207E  
BBVCT62ZA BBVCT62ZA None None   V8I, V35T, T39E, S48T, K122E, D123N, K173V, Q174R, D177E, T200A, Q207E, R211K, V245Q, E248Q, A272P, K277R  
BBVCT63ZA BBVCT63ZA None None   I5M, E6K, V35L, T39E, S48T, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, R211K L12I, P19T 
BBVCT64ZA BBVCT64ZA None None   K22R, V35T, T39S, S48T, W88C, K122E, I135R, S162Y, K173T, D177E, V179I, T200V, Q207E, R211K, V245Q, E248V, A272P, T286A, E291D, V292I, I293V  
BBVCT65ZA BBVCT65ZA None None   P4S, K32R, V35T, E36A, T39E, S48T, K122E, D123G, T165I, K173T, D177E, I178L, G196K, T200A, Q207A, R211K, P243Q, V245Q, K277R, T286A, E291D, I293V  
BBVCT67ZA BBVCT67ZA None None   V35T, E36A, T39E, S48T, K82R, A98S, K102R, K122E, D123G, K173A, Q174K, D177E, V179I, Q207E, V245Q, A272P, Q278H, I293V, Q334H  
BBVCT69ZA BBVCT69ZA None None   K11Q, V35T, T39E, V60I, S68G, T69N, D121C, K122E, D123S, K173A, Q174N, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
BBVCT71ZA BBVCT71ZA None None   K32I, V35T, E36A, T39E, A98S, K101Q, K122E, I135K, T139S, K173A, Q174R, D177E, I178V, V179I, E204K, Q207R, L210V, R211K, D218N, V245Q, E248K, A272P, V292I, I293V, E298K, Q334H, G335D, R356K, G359T, T377Q, K390R, A400L, E404D G152R, P217Q 
BBVCT73ZA BBVCT73ZA None None   V35T, E36A, T39E, S48T, K104R, K122E, D123N, T139V F130L, T131N 
BBVCT75ZA BBVCT75ZA None None   K20R, E28A, V35T, E36A, T39E, S48T, V60I, K122E, D123N, K173A, Q174K, T200A, Q207A, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, K311R, E312V, Q334N, G335E, R356K, G359T, T369A, T377L, K390R, A400T, E404D, V435A, G436E, Y441L K11L 
BBVCT76ZA BBVCT76ZA None None   E6D, V35T, E36A, T39E, S48T, V60I, A98S, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q, T286A, V292I, I293V  
BBVCT77ZA BBVCT77ZA None None   P4S, V35T, T39D, V60I, K122E  
BBVCT78ZA BBVCT78ZA None None   E6D, V21I, V35T, T39E, S48T, K122E, D123G, S163C, K173I, Q174K, D177E, G196E, T200A, Q207E, V245Q, V276I, K277R, T286A, E291D, V292I, I293V