<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Liao (2009)
Title Phylodynamic analysis of the dissemination of HIV-1 CRF01_AE in Vietnam.
Citation Virology
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 33
NumPts 33
Subtype CRF01_AE


Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
VNAG201 97VNAG201 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162ST, T165I, K173I, Q174K, D177E, I178M, Q207V, R211N, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, S379G, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG202 97VNAG202 None None   E6D, K11T, V35T, T39N, K122E, D123T, K173I, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, K238R, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG204 97VNAG204 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173T, Q174K, D177E, Q207A, R211S, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376T, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, L491T, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG206 97VNAG206 None None   E6D, K11T, V35T, T39K, K43E, K102R, V118I, D121H, K122E, D123S, I142V, K173I, Q174K, D177E, V179I, T200I, Q207A, R211N, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, Y342F, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, H483Q, L491S, K512R, L517V, Q524E, K530R, A534S, A554S  
VNAG207 97VNAG207 None None   E6D, K11T, E28K, K32E, V35T, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R, V245E, E291D, V292I, I293V, K311Q, E312T, I326V, I329V, G335D, M357K, G359S, K366R, T369TA, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG208 97VNAG208 None None   E6D, K11T, V35T, V60I, K102R, D121H, K122E, D123S, K173I, Q174K, D177E, Q207A, R211N, K238R, V245E, K277R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, V435I, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG210 97VNAG210 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, Q524E, A534S, A554S  
VNAG212 97VNAG212 None None   E6D, V35T, T39K, V106I, K122E, D123S, S162C, K173T, Q174K, D177E, T200I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, P294S, K311R, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG214 97VNAG214 None None   E6N, K11T, V35T, T39K, V106I, K122E, D123S, S162C, K173I, Q174K, D177E, Q207G, R211X, K238R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG216 97VNAG216 None None   E6D, K11T, V35T, T39K, V106I, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245K, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, E529D, A534S, A554S  
VNAG218 97VNAG218 None None   E6D, K11T, V35T, T39N, K122E, D123S, K173I, Q174K, D177E, I178M, Q207G, R211S, K238R, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG220 97VNAG220 None None   E6D, K11T, V35T, T39K, K122E, D123S, K173I, Q174K, D177E, I178M, E204K, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG221 97VNAG221 None None   E6D, K11T, V35T, T39K, K122E, D123S, K173I, Q174K, D177E, I178M, E204K, Q207V, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNAG223 97VNAG223 None None   E6D, K11T, V35T, T39E, K122E, D123S, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Y, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNBG4 VNBG4 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I329V, G335D, E344K, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S K13R 
VNBG5 VNBG5 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S  
VNBG6 98VNBG6 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNBG7 98VNBG7 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNHCM301 97VNHCM301 None None   E6D, K11T, V35T, T39K, W88C, K122E, D123S, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491P, K512R, L517V, Q524E, A534S, A554S  
VNHCM302 97VNHCM302 None None   E6D, K11T, V35T, T39K, K122E, D123S, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, K249Q, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNHCM303 97VNHCM303 None None   E6D, K11T, V35T, T39K, K122E, D123S, K173I, Q174K, D177E, I178M, Q207V, R211S, K238R, V245E, K249R, K277R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, I382V, K390R, K395R, E399G, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNHCM306 97VNHCM306 None None   E6D, K11T, V35T, T39E, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, K311Q, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554P Q258R 
VNHCM309 97VNHCM309 None None   E6D, K11T, I31V, V35T, T39N, S68G, K122E, D123S, T165I, K173I, Q174K, D177E, I178M, T200A, Q207A, R211N, V245E, K277R, T286A, A288G, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S H96R 
VNHCM310 97VNHCM310 None None   E6D, V35T, T39K, K43Q, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNHCM314 97VNHCM314 None None   E6D, V35T, T39K, T69P, V106L, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207G, R211S, V245E, T286A, E291D, V292I, I293V, K311R, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, A376S, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S, A554S R78K 
VNHCM319 97VNHCM319 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, Q207A, R211S, K238R, T286A, E291D, V292I, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, V417I, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554T  
VNHCM343 97VNHCM343 None None   E6D, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207A, K238R, V245E, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, L452I, D471E, Q480H, H483Q, L491S, K512R, E514D, L517V, S519N, Q524E, A534S, A554S  
VNHCM345 97VNHCM345 None None   E6D, V35T, T39K, K43Q, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, V276I, T286A, E291D, V292I, I293V, E312A, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, E514D, L517V, S519N, Q524E, A534S, I556V  
VNHD10 98VNHD10 None None   E6D, K11T, V35T, T39K, K102E, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, Q330H, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, E514D, L517V, S519N, Q524E, A534S, A554S  
VNHD11 98VNHD11 None None   E6D, K11T, G18A, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, E514D, L517V, S519N, Q524E, A534S, A554S P19T 
VNHD9 98VNHD9 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, K281R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, E514D, L517V, S519N, Q524E, A534S, A554S  
VNND15 98VNND15 None None   E6D, K11T, V35T, T39K, S68G, K122E, D123S, K173I, Q174K, D177E, Q207A, R211S, K238R, V245E, K249R, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
VNND17 98VNND17 None None   E6D, K11T, V35T, T39K, K102R, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, K323E, I326V, I329V, G335D, E344K, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, R461K, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S