Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Smith (2009)
Title A public health model for the molecular surveillance of HIV transmission in San Diego, California.
Citation AIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 662
NumPts 662
Subtype B, C, CRF02_AG, A, D


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Page 1   listing Isolate 1 to Isolate 100 from Total 662 Clinical PR Isolates

PI1 US2001PI1 None    G16GR, M36IV, R41K, I62V, H69Y  
PI10 US1997PI10 None    L63P, I72L, V77I  
PI100 US2003PI100 None   L10LF T12TI, E35D, N37E, R41K, R57RK, D60DE, I62V, L63S, K70KR, V77VI  
PI11 US2001PI11 None  L90M  K14R, L19I, L63P, A71T, I72V, I93L  
PI12 US1999PI12 None    I13V, I15V, M36I, L63P, K70T  
PI13 US1998PI13 None    L19I, N37T, K70R  
PI14 US2000PI14 None    N37S, V77I, I93L  
PI15 US2002PI15 None    N37H, R41K, V77I, I93L  
PI16 US2001PI16 None    H69Y  
PI17 US1999PI17 None    I15IV, M36I, R41K, L63LHQ, H69K, K70R, L89M, I93L  
PI18 US2001PI18 None    I13V, L63Q  
PI19 US2000PI19 None    Q61N  
PI2 US2003PI2 None    I15V, I62V, L63Q, I64IV, I93L  
PI20 US2002PI20 None    T12TS, I13V, K14KR, I62IV, L63Q, I64IV, T91V  
PI21 US2002PI21 None    I13V, K20I, E35ED, M36I, N37NS, R41K, H69K, K70R, L89M  
PI22 US2002PI22 None    I13V, K20I, M36I, R41K, H69K, K70R, L89M  
PI23 US2002PI23 None    I62V, L63P, V77I, I93L  
PI24 US2002PI24 None    I13V, K20R, M36I, N37NS, R41KN, R57K, L63P, I72E  
PI25 US2002PI25 None    I13V, E35D, N37T, L63P  
PI26 US2002PI26 None    I13V, I15V, G16A, N37ND  
PI27 US2003PI27 None    I64V, I72M, V77I  
PI28 US2003PI28 None    K14R, R41K, D60E, L63P, I93L  
PI29 US2003PI29 None    I13V, I15V, L19V, R41RK, L63P  
PI3 US2003PI3 None    L10I, I13V, N37S, L63S, I64V, E65D, I72V, V77I  
PI30 US2003PI30 None    N37C, K70R, V77I  
PI31 US2003PI31 None    I15V, N37S, I64V  
PI32 US2003PI32 None    E35D, N37D, D60E, L63P  
PI33 US2003PI33 None    T12S, I15V, L19I, M36T  
PI34 US2003PI34 None    I15V, N37S, R41K, I64V, V77I  
PI35 US2001PI35 None    R57K, L63P, V77I, I93L  
PI36 US2001PI36 None    I15V, N37D, K45R, L63P, V77I, I93L  
PI37 US2001PI37 None    T12A, E35D, L63P, H69Q  
PI38 US2001PI38 None    T12A  
PI39 US2001PI39 None    E35D, V77I, L89M  
PI4 US2003PI4 None   L33I L63P, I64IL, V77VI, I93L  
PI40 US2001PI40 None    N37H, R41K, V77I, I93L  
PI41 US2001PI41 None    L63P  
PI42 US2002PI42 None    N37S, L63T, H69Q, I93L  
PI43 US2002PI43 None    P39T, L63P, H69Q, V77I  
PI44 US2002PI44 None    E35D, M36I, R41K, I62V, L63S, H69Y, A71T, I72T  
PI45 US2002PI45 None    N37H, R41K, V77I, I93L  
PI46 US2002PI46 None    L10V, T12E, I13V, L33V, N37Y, P39Q, D60E, L63P, L89M  
PI47 US2001PI47 None    I15V, L19IT, R41K, L63F  
PI48 US2002PI48 None    L10I, I93L  
PI49 US2002PI49 None    E35D, M36I, R41K, I62V, L63S, A71T, I72T  
PI5 US2003PI5 None    T12S, E35D, L63P, H69Q  
PI50 US2002PI50 None    Q18E, E35D, N37H, R41K, L63P, I64V, E65D, K70R, I72V  
PI51 US2002PI51 None    T12S, L19I, L63G, K70R, V77I  
PI52 US2002PI52 None    K14R, E35D, N37S, R41K, L63P, I72V  
PI53 US2001PI53 None    L63T  
PI54 US2002PI54 None    E35D, M36I, N37D, L63Q, I64V, E65D  
PI55 US2001PI55 None  I54V, V82A Q58E L19I, N37E, L63P, A71V, I93L  
PI56 US1997PI56 None    M36L, R57K, L63P  
PI57 US2002PI57 None    N37A, L63T, I72V, V77I  
PI58 US2002PI58 None    I13V, L63P, I64V, V77I  
PI59 US2002PI59 None    L10I, I93L  
PI6 US2003PI6 None    N37M, I62V, L63P, Q92E  
PI60 US2002PI60 None    M36I  
PI61 US2002PI61 None    E35D, I93L  
PI62 US2002PI62 None    L10I, K14R, N37D, R41K, L63V, V77I, I93L  
PI63 US2002PI63 None    K14R, I15V, N37E  
PI64 US2002PI64 None    E35D, V77I, L89M  
PI65 US2002PI65 None    I13V, R57K, L63P P9PS 
PI66 US2002PI66 None    K14R, I15V, E35D, N37E, I62V, L63P, G68D, A71T, I93L  
PI67 US2002PI67 None    L63P, I72V, V77I, I93L  
PI68 US2002PI68 None    L10I, R41K, K43R, I62V, L63HP, I93L  
PI69 US2002PI69 None    R57RK, L63P, I72T  
PI7 US2003PI7 None    T12N, K14R, L63P  
PI70 US2002PI70 None    T12S, L19I, N37C, P39S, L63P  
PI71 US2002PI71 None    E35D, N37T, L63P, I93L  
PI72 US2002PI72 None  M46L  V77I, L89M  
PI73 US2002PI73 None    N37S, L63LP, I93L  
PI74 US2002PI74 None    E35D, V77I, L89M  
PI75 US2002PI75 None    I13V, I15V, L19V, L63P  
PI76 US2002PI76 None  I54V, I84V, L90M  L10I, K20R, E35D, M36I, N37S, R57K, L63P, A71V, I93L  
PI77 US2002PI77 None    L10V, T12A, I15V, N37T, R41K, I62V, I93L  
PI78 US2002PI78 None    T12S, I15V, L63P  
PI79 US2002PI79 None    K14R, I15V, N37S, I64V  
PI8 US2001PI8 None    K14R, L33V, N37IT, R41K, I62V, I64V  
PI80 US2003PI80 None    M36I, R41K, I93L  
PI81 US2003PI81 None    E34EG, M36MT, P39T, I62V, L63P, H69Q, V77I  
PI82 US2003PI82 None    P39T, I62V, L63P, H69Q, V77I  
PI83 US2003PI83 None    N37S, R41K, L63P, V77I, I93L  
PI84 US2003PI84 None    T12N, I15V, L19I, M36I  
PI85 US2003PI85 None    I13V, L63P, I64V, V77I  
PI86 US2003PI86 None    L10V, T12N, L19I, L63P, I93L  
PI87 US2003PI87 None    I13V, E35D, N37T, L63P  
PI88 US2003PI88 None    I15V, R41K, L63Q  
PI89 US2001PI89 None    N37H, R41K, I72V, V77I, I93L  
PI9 US2000PI9 None    L10I, T12N, L19V, N37S, L63I, I64V, I93L  
PI90 US2002PI90 None    T12P, I13V, K14R, L63HP, I64V, C67CW  
PI91 US2001PI91 None    T12AE, K14KR, R41K, K43R, D60E, L63P, I64V  
PI92 US2003PI92 None  D30N, M46I, I84V, L90M L10F, L33I, N88D I13V, A22V, M36I, K45R, L63P, A71V, T74S, N83S, T91S, I93L  
PI93 US2003PI93 None    L10V, E35D, N37D, R41K, I62V, L63P, I93L  
PI94 US2003PI94 None    I13V, R57K, L63P, I64V  
PI95 US2003PI95 None    T12S, L19I, E35D, Q61H, I62V, L63S  
PI96 US2003PI96 None    N37S, P39Q, R41K, R57K, D60E, L63P, A71V, V77I, I93L  
PI97 US2003PI97 None    E35D, N37S, L63P  
PI98 US2003PI98 None    T4S, I13V, N37S  
PI99 US2003PI99 None    T12S, L19I, N37S, I64V