<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Rosen-Zvi (2008)
Title Selecting anti-HIV therapies based on a variety of genomic and clinical factors.
Citation Bioinformatics
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 162
NumPts 65
Subtype B, CRF01_AE, CRF02_AG, A, C, CRF45_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 162 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
03p1-1 None    I13V, K14R, K20R, M36I, N37D, R41K, L63P, H69K, K70R, L89M  
  04p1-2 LPV 85 V82A N83D L10V, I13V, K14R, K20R, M36I, N37D, R41K, Q61H, H69K, K70R, L89I  
  05p1-3 LPV, RTV, APV 140 M46I, V82A, I84V N83D L10V, I13V, K14R, K20R, A22V, M36I, N37D, R41K, Q61H, H69K, K70R, L89I  
10 99p10-1 IDV, SQV, NFV, RTV 133 G48V, V82A, L90M  L10V, L19I, N37S, I62V, L63P, I64V, T74S, V77I  
  00p10-2 IDV, SQV, NFV, RTV 133 L90LM  L10LV, I15IV, N37AS, L63HQ, I64V, V77I  
  01p10-3 IDV, SQV, NFV, RTV, LPV 162 G48V, I54T, V82A, L90M  L10V, L19I, E34EQ, N37S, R41RK, I62V, L63P, I64V, H69R, A71V, T74S, V77I  
11 99p11-1 IDV, SQV, NFV 109   K14R, L63P, V77I, I93L  
13 03p13-1 None   L33F, Q58E E35D, I62V, L63H T74R 
15 00p15-1 SQV, NFV 97 L90M  E35D, N37S, L63P, I64V  
  01p15-2 SQV, NFV, APV, LPV 176 L90M L10F, Q58QE, G73GA E35D, N37NS, L63P, I64V  
  03p15-3 SQV, NFV, APV, LPV 232 M46I, I54V, I84V, L90M L10F, Q58E E35D, N37NH, Q61QR, L63P, I64IV  
  08p15-4 SQV, NFV, APV, LPV, RTV, TPV 541 M46ML  I15V, E35ED, N37ND, R41RK, I62V, L63P, V77VI, I93L  
16 02p16-1 SQV, RTV, IDV 47   L10I, T12A, I13V, E35D, M36I, R41K, R57K, L63LAPV, H69K, K70KR, L89M  
  06p16-2 SQV, RTV, IDV, LPV 287 V82F  L10I, T12A, I13V, E35D, M36I, R41K, R57K, H69K, L89I  
17 00p17-1 SQV, IDV, NFV, RTV 199 M46I, L90M L23I, F53L, G73S L10I, I13V, I15IV, K20KR, I62IV, L63P, H69R, A71V, V77I  
  00p17-2 SQV, IDV, NFV, RTV 201 L90M L23I, F53L, G73S Q7QE, L10MV, T12TA, I13V, I15IV, K20T, L63P, H69R, A71V, V77I V11R, Q18Q*, Q58QL 
  01p17-3 SQV, IDV, NFV, RTV, APV 257 M46I, I54M, L90M L23I, L33F, F53L, G73S L10I, I13V, I15V, K20R, L63P, H69R, A71V, V77I  
  08p17-4 SQV, IDV, NFV, RTV, APV, LPV 625   I13V, N37S, L63P, V77I W42W*, G51GR 
18 02p18-1 RTV, IDV 261 V82A  N37NH, I64V, V77I  
19 00p19-1 IDV, SQV, NFV, RTV 80   L10I, I13V, K14R, I15V, G16E, E35D, N37S, R41K, K45KR, L63T, I72T  
99p2-1 IDV, SQV, RTV, NFV 154 I54V, V82A, L90M F53L L10I, R41K, K55R, R57K, L63P, A71I, I72V, I93L, C95F  
  00p2-2 IDV, SQV, RTV, NFV 166   K14KR, R41K, R57K, L63P, A71T, I72IV, I93L  
  00p2-3 IDV, SQV, RTV, NFV, APV, LPV 187 I54V, V82A, L90M L10F, L33F, F53L R41K, K55R, R57K, I62V, L63P, A71I, I72V, I93L, C95F  
  01p2-4 IDV, SQV, RTV, NFV, APV, LPV 250 I54V, V82A, L90M L10F, L33F, F53L I13V, K20T, R41K, K55R, R57K, I62V, L63P, A71I, I72V, I93L, C95F  
  02p2-5 IDV, SQV, RTV, NFV, APV, LPV 264 I54V, V82A, L90M L10F, L33F, F53L I13V, K20T, R41K, K55R, R57K, I62V, L63P, A71I, I72V, I93L, C95F  
  03p2-6 IDV, SQV, RTV, NFV, APV, LPV 286 I54V, V82A, L90M L10F, L33F, F53L I13V, K20T, R41K, K55R, R57K, I62V, L63P, A71I, I72V, I93L, C95F  
21 00p21-1 IDV, NFV 139 M46I, L90M G73T T12P, L19I, K20I, L63P, C67W, V77I, I93L  
22 01p22-1 SQV, IDV 130 L90M  L10I, K20I, M36I, R41K, K43R, I62V, L63P, A71V, I72T, T74A, I93L  
23 01p23-1 IDV, SQV 126   I15A, E35D, N37D, I62V, L63P, C67CY, A71V, I93L  
24 00p24-1 IDV 117 V32I L10F M36I, K43R, I62V, L63P, G73V, Q92E  
  03p24-2 IDV, SQV, LPV 252   K43R, L63P, Q92K  
25 00p25-1 NFV, IDV 140 M46L  L10R, K55R, L63P, I93L D29A 
27 02p27-1 SQV 252 L90M  I13V, R41K, L63P, A71V, I72V, T74S, V77I, I93L  
  04p27-2 SQV 262 L90M  L10I, I13V, R41K, L63P, T74S, V77I, I93L  
  04p27-3 SQV 262 L90M  L10IV, I13V, R41K, L63P, T74S, V77I, I93L  
  04p27-4 SQV 262   R41K, I62IV, L63P, V77I, I93L  
  04p27-5 SQV 262 L90M  L10IV, I13V, R41K, L63P, T74S, V77I, I93L, F99FL  
  04p27-6 SQV 262 L90M  L10IV, I13V, R41K, L63P, T74S, V77I, I93L  
  05p27-7 SQV 262 L90M  L10IV, I13V, R41K, L63P, T74S, V77I, I93L  
  07p27-8 SQV 262 L90M  L10V, I13V, R41K, L63P, T74S, V77I, I93L  
28 99p28-1 SQV, NFV, IDV 128   I13IV, K14KR, L63LP, V77I  
  03p28-2 SQV, NFV, IDV, LPV 344   K14KR, R57RK, V77VI  
30 04p30-1 None    I13IV, L63H  
  06p30-2 None    L10LI, K14KR, L63HP  
  06p30-3 RTV, APV 18   L10LI, I13IV, K14KR, L63H  
36 02p36-1 None    L10V, T12I, I13V, I15V, G16E, E35D, M36I, R41K, K45R, L63AT, H69K, I72IV, L89M  
  06p36-2 LPV 155   L10V, T12I, I13A, I15V, G16E, E35D, M36I, R41K, K45R, L63T, H69K, L89M  
  06p36-3 LPV 155   L10V, T12I, I13AV, I15IV, G16E, E35D, M36I, R41K, K45R, L63T, H69K, I72IV, L89M  
37 04p37-1 SQV, IDV, NFV, APV, LPV 378 G48V, I54V, V82S, I84V  L10I, E34Q, L63P, A71T  
38 99p38-1 SQV, IDV, NFV, RTV 95 I84V, L90M  I13V, K20I, M36I, I62V, L63P, I64V, T74S  
39 01p39-1 RTV, IDV, LPV 138   I13V, E35D, M36I, R41K, K45R, L63LP, H69K, L89M  
  03p39-2 RTV, IDV, LPV 248   I13IV, E35D, M36I, R41K, K45R, L63LP, H69K, L89M  
  08p39-3 RTV, IDV, LPV, ATV 479   E35D, M36I, R41K, K45R, L63P, H69K, A71T, L89M  
03p4-1 RTV, IDV 288   R41K, I93L  
  05p4-2 RTV, IDV 288   N37NS, R41RK, I93L  
41 04p41-1 None    G16GE, Q18QE, I64V  
  04p41-2 None    G17GD, I64V  
  04p41-3 Unknown    K14KR, G17GD, Q18QE, I64V  
  05p41-4 Unknown    Q18E, I64V G78GR 
  06p41-5 Unknown    I13IV, G17GD, Q18QE, I64V  
  07p41-6 Unknown, RTV, APV 34   I13IV, G17GD, Q18QE, I64V  
42 02p42-1 SQV, IDV 123   I15V, M36MI  
45 04p45-1 None    I13V, K14R, K20I, M36I, R41K, H69K, K70KR, L89M  
  04p45-2 LPV   I13V, K14R, K20I, M36I, R41K, H69K, K70KR, L89M  
  06p45-3 LPV 109   I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
  07p45-4 LPV 109   I13V, K14R, K20I, E35ED, M36I, R41K, H69K, L89M  
46 00p46-1 RTV, SQV, NFV, APV 141 M46MIL, I54V, V82M, I84V, L90M L33F, Q58E L10V, T12V, I13IV, K14KR, I15V, K20R, E35D, M36I, N37E, R41K, R57K, L63P, H69K, L89I  
  02p46-2 RTV, SQV, NFV, APV, LPV 205 I54V, L76V, V82M, L90M L33F, Q58E, G73S, L89V L10V, T12V, I13V, K14KR, I15V, K20R, E35D, M36I, N37E, R57K, I62IV, L63P, H69K  
47 01p47-1 SQV 229 I84V, L90M G73S L10LI, I13V, K14KR, I15V, Q18QH, K20KIM, N37D, L63P, A71V  
  02p47-2 SQV, LPV, RTV, APV 321 M46L, I54M, I84V, L90M V11I, G73S L10I, I13V, I15V, N37D, L63P, A71V, I72M  
48 99p48-1 SQV, NFV, IDV, APV 137 G48V, I54V, V82A K43T L10I, T12S, I13V, K20I, L63P, A71T, T74S, V77I  
  00p48-2 SQV, NFV, IDV, APV 139   T12A, L63P, V77I  
  00p48-3 SQV, NFV, IDV, APV 139   T12A, L63P, V77I  
  00p48-4 SQV, NFV, IDV, APV, LPV 176 G48V, I54V, V82A K43T L10I, T12S, I13V, K20I, M36I, L63P, T74S  
99p5-1 NFV 117 D30N N88D E35D, M36MIV, N37D, R41K, L63P, I64V  
  02p5-2 NFV 268 D30N N88D K20KR, E35D, M36MIV, N37D, R41K, L63P, I64V, V77VI  
  03p5-3 NFV 331 D30N N88D K20R, E35D, M36I, N37D, R41K, I62V, I64V, V77I  
50 00p50-1 SQV, RTV, IDV, NFV 155   I15V, I62V, L63P, V77I, I93L  
  03p50-2 SQV, RTV, IDV, NFV, LPV 278   I15V, I62V, L63P, V77VI, I93L H69HL 
  06p50-3 SQV, RTV, IDV, NFV, LPV 410   I15V, I62V, L63P, V77VI, I93L  
52 00p52-1 None    L10I, E35D, K43R, R57RK, L63PT, I64V, E65D  
53 04p53-1 SQV, LPV 367 L90M  I62V, L63P, A71V, V77I, I93L  
  05p53-2 SQV, LPV 394   I62V, L63P, A71T, V77VI, I93L R87RK 
54 99p54-1 SQV, NFV, RTV, IDV 113   I15V, E35D, N37S, L63P  
  09p54-2 SQV, NFV, RTV, IDV, LPV 510   I15V, E35D, N37S, L63A  
55 03p55-1 None    N37S, L63C  
59 99p59-1 SQV, NFV, IDV 93 V82T, L90M G73S K14R, I15V, N37E, L63P, A71V, I72L  
  00p59-2 SQV, NFV, IDV, LPV 105 M46L, I54V, V82A, L90M  L10I, K14R, I15V, R41K, L63P, K70R, A71V, I72T, I93IL  
  01p59-3 SQV, NFV, IDV, LPV 169 I54V, V82A, L90M G73S L10I, K14R, I15V, N37E, L63P, A71V, V77VI  
00p6-1 IDV, SQV, RTV 188 I54V, V82A L24I L10I, R41K, L63P, A71T, I72V  
  00p6-2 IDV, SQV, RTV, LPV 211 I54V, V82A L24I L10I, I15V, R41K, L63P, A71T, I72V P81PL 
  00p6-3 IDV, SQV, RTV, LPV 223 I54V, V82A L24I L10I, I15IV, M36MI, R41K, L63P, A71T, I72V  
60 99p60-1 NFV, SQV, IDV 112   R41RK, I62V, L63P, V77I, I93L  
  01p60-2 NFV, SQV, IDV 157 L90LM G73GS L10LI, I15IV, K20KIM, K43KR, I62V, L63P, A71AV, V77I, I93L  
  01p60-3 NFV, SQV, IDV 157   I62V, L63P, V77I, I93L  
  02p60-4 NFV, SQV, IDV 157   L10LI, R41RK, K43KR, I62V, L63P, A71AV, V77I, I93L L89LQ 
  04p60-5 NFV, SQV, IDV 157 M46I, I54V, V82VF, L90M G73S I62V, L63P, A71V, V77I, I93L  
01p7-1 None  V82L  L19I, L63LP, A71T, I93L  
  02p7-2 None  V82L  L19I, I62IV, L63LAPV, A71T, I93L  
03p8-1 None    T12K, K14KNRS, G17GE, L19I, L63LP