<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Nguyen (2008)
Title HIV drug resistance threshold survey using specimens from voluntary counselling and testing sites in Hanoi, Vietnam.
Citation Antivir Ther
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 49
NumPts 49
Subtype CRF01_AE

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
001 VN001 None None   V35L, E36N, I37X, T39K, K43Q, V60VI, K122E, D123S, S162C, K173I, Q174K, D177E, T200TA, Q207S, R211S, K238R, V245E  
002 VN002 None None L74LV Y181YC K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39DEKN, K122E, D123S, S162C, K173I, Q174K, D177E, V179VI, T200I, Q207QHKN, R211S, K238R, V245E  
003 VN003 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K43Q, K122E, D123NS, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E  
004 VN004 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K43KE, V111VIM, K122E, D123S, S162C, K173KIR, Q174K, D177E, I178M, G196GE, Q207GS, R211RS, K238R, V245E  
005 VN005 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, V106VI, K122E, D123S, S162C, K173AV, Q174K, D177E, I178IM, Q207S, R211S, K238R, V245E  
006 VN006 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39E, K122E, D123NS, I135X, S162C, K173I, Q174K, D177E, I178M, T200TA, Q207S, R211S, K238R, V245E  
007 VN007 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39S, T69TN, K122E, D123S, S134X, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  
008 VN008 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39TA, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  
009 VN009 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K102KE, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207NS, R211S, K238R, V245EQ  
010 VN010 None None   K30X, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K122E, D123S, T139TI, S162C, K173IT, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E  
011 VN011 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, T69TS, K122E, D123S, I135IT, S162C, K173I, Q174K, D177E, I178M, T200A, Q207S, R211S, K238R, V245E  
012 VN012 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37F, T39E, K122E, D123N, S162C, K173AV, Q174K, D177E, I178M, T200TA, Q207S, R211RKNS, V245E  
013 VN013 None None   V35L, E36N, I37X, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E  
014 VN014 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39A, K122E, D123S, I135RT, S162C, K173I, Q174K, D177E, I178IM, Q207S, R211S, K238R, V245E  
015 VN015 None None   V35L, E36N, I37X, T39K, K43Q, K122E, D123S, S162C, K173I, Q174K, D177E, I178IM, Q207NS, R211S, K238R, V245EK  
017 VN017 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39E, V106I, V118VI, K122E, D123NS, S162C, K173I, Q174K, D177DE, Q207S, R211S, K238R, V245E  
018 VN018 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39E, K122E, D123S, I135IV, S162C, K173I, Q174KR, D177E, I178M, Q207D, R211S, K238R, V245E  
019 VN019 None None   V35L, E36N, I37F, T39E, K122E, D123N, S162C, K173I, Q174K, D177E, T200E, Q207G, R211KN, K238R, V245E  
020 VN020 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K122E, D123S, S162C, F171Y, K173I, Q174K, D177E, I178M, E204D, Q207S, R211S, K238R, V245E  
021 VN021 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200TA, Q207S, R211S, K238R, V245E  
022 VN022 None None   E28D, K30X, I31X, K32G, A33C, L34T, V35L, E36N, I37X, T39E, V106I, K122E, D123NS, S162C, K173I, Q174K, D177DE, Q207S, R211S, K238R, V245E E29S 
024 VN024 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39DN, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  
025 VN025 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, K122E, D123S, I135V, S162C, K173I, Q174K, D177E, I178IM, T200TI, Q207KN, R211S, K238R, V245E  
027 VN027 None None   V35L, E36N, I37F, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200TI, Q207S, R211S, K238R, V245E  
028 VN028 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39E, V106I, K122E, D123NS, S162C, K173AV, Q174K, D177E, T200TA, Q207S, R211S, K238R, V245E  
029 VN029 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39E, K122E, D123S, N136X, S162C, K173R, Q174K, D177E, Q207S, R211S, K238R, V245E  
030 VN030 None None   V35L, E36N, I37F, T39K, K43E, K122E, D123N, S162C, K173A, Q174K, D177E, I202V, Q207S, R211S, K238R, V245E  
031 VN031 None None   E28D, K30X, I31X, K32G, A33C, L34T, V35L, E36N, I37X, T39E, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, I178IM, T200A, Q207S, R211X, K238R, V245E E29S 
032 VN032 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, E40D, V60I, T107S, K122E, D123S, S162C, K173I, Q174K, D177E, V179I, Q207N, R211S, K238R, V245E  
033 VN033 None None   V35L, E36N, I37X, T39D, T69TN, K102KQ, V106VI, D123N, S162C, K173IT, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E  
034 VN034 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37F, T39K, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, I178M, G196E, Q207N, R211S, V245E  
035 VN035 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K122E, D123S, S162C, K173R, Q174E, D177E, I178M, Q207K, R211S, K238R, V245E  
036 VN036 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39A, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200TAIV, I202IV, Q207N, R211GS, F214FL, K238KR, V245E  
037 VN037 None None   K30X, K32G, A33C, L34T, V35L, E36N, I37F, T39TK, K43KE, K102R, D123S, S162C, K173I, Q174K, D177E, V179I, Q207S, R211S, K238R, V245E  
038 VN038 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K122E, D123S, S162C, K173AV, Q174K, D177E, T200I, Q207DGNS, R211S, K238R, V245E  
039 VN039 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K43KE, V111VIM, K122E, D123S, S162C, K173KR, Q174K, D177E, I178M, G196GE, Q207X, R211RS, K238R, V245E  
040 VN040 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39KN, T69TN, K122E, D123S, S162C, K173T, Q174K, D177E, T200A, I202V, Q207NS, R211T, V245E  
041 VN041 None None   V35L, E36N, I37X, T39EK, K43KQ, V106I, V118I, D123N, S162C, K173IT, Q174K, D177E, I178M, Q207S, R211S, V245E  
042 VN042 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39N, K122E, D123S, S162C, K173I, Q174K, D177E, I178IM, T200TI, Q207NS, R211ST, K238R, V245E  
043 VN043 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, E40D, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207R, R211S, K238R, V245A  
044 VN044 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K122E, D123S, S162Y, K173I, Q174K, D177E, V179VI, T200TI, E203ED, Q207S, R211S, V245E  
045 VN045 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39A, V60I, K122E, D123S, S162C, Q174N, D177E, Q207N, R211K, K238R, V245E  
046 VN046 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, V179VI, Q207S, R211S, K238R, V245E  
047 VN047 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39A, V60I, K122E, D123S, S162C, Q174N, D177E, Q207N, R211K, K238R, V245E  
048 VN048 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37X, T39N, K122E, D123S, S162C, K173I, Q174K, D177E, I178IM, T200TI, Q207NS, R211ST, K238R, V245E  
049 VN049 None None   V35L, E36N, I37X, T39K, K122E, D123S, S162C, K173IM, Q174K, D177E, I178IM, V179VI, Q207S, R211S, K238R, V245E  
050 VN050 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37F, T39K, K43Q, K122E, D123S, Q145X, S162C, K173T, Q174K, D177E, T200TA, Q207S, R211S, K238R, V245E  
051 VN051 None None   K30Q, K32G, A33C, L34T, V35L, E36N, I37F, T39K, K122E, D123S, S162C, K173R, Q174E, D177E, I178M, Q207K, R211S, K238R, V245E  
052 VN052 None None   V35L, E36N, I37X, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  

Database

Resources

Team