Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Cardoso (2009)
Title HIV-1 pol phylogenetic diversity and antiretroviral resistance mutations in treatment naive patients from central west Brazil.
Citation J Clin Virol
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 97
NumPts 97
Subtype B, F, C


Clinical PR Isolates

BRGO3001 BRGO3001 None    E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I72T, L89M  
BRGO3002 BRGO3002 None   L33I L19LI, N37AGST, L63P, C67S, H69HY  
BRGO3003 BRGO3003 None    L19I, R41K T12H 
BRGO3004 BRGO3004 None    L10V, T12V, I13V, G16E, E35D, M36I, R41K, R57K, I62V, L63N, I64V, K70R  
BRGO3005 BRGO3005 None    K14KR, I15V, R41K, I62V, L63P, H69Q, I72V  
BRGO3007 BRGO3007 None    M36I, N37K, R41N, L63P, H69K, I72V, I93L  
BRGO3008 BRGO3008 None    T12S, L19I, N37C, L63T  
BRGO3009 BRGO3009 None    L63AP, V77I  
BRGO3010 BRGO3010 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, V77I, L89M  
BRGO3011 BRGO3011 None    T12N, K20R, E35D, M36I, R41K, R57K, D60E, Q61E, I62V, L89M  
BRGO3012 BRGO3012 None    I15V, N37S, R41K, K43R, L63LP  
BRGO3013 BRGO3013 None    I15V, L38IM, I62V, L63P, V77I, L89M, I93L  
BRGO3015 BRGO3015 None    I15V, E35D, M36I, R41K, R57K, Q61N, L63S, I72T  
BRGO3016 BRGO3016 None    T12N, K14KR, E35D, L63Q, I64V  
BRGO3017 BRGO3017 None    I13V, I15V, R41K, I64V  
BRGO3018 BRGO3018 None    T12S, L19V, N37C, I62V, L63A  
BRGO3019 BRGO3019 None    E35D, R57K, I62V, L63Q, A71V, I72IT, I93L  
BRGO3021 BRGO3021 None    L19I, N37D, R41K, D60E, L63LIM, V77I, I93L  
BRGO3022 BRGO3022 None    T12N, L19I, R41K  
BRGO3024 BRGO3024 None    L10LV, I15V, E35D, M36I, R41K, R57K, Q61N, E65D, I72V, L89M  
BRGO3026 BRGO3026 None    I15V, M36MI, N37S, R41K, L63LP, I64V, H69Q  
BRGO3027 BRGO3027 None    L10I, I13V, N37S, R41K, I62V, I64V  
BRGO3028 BRGO3028 None    L10I, L19I, L33V, N37ST, I62V, L63T, I72V, V82VI  
BRGO3029 BRGO3029 None    L33V, N37A, I64V  
BRGO3032 BRGO3032 None    K20R, E35D, M36I, R41K, Q61QE, L63P, I72V, I93L  
BRGO3033 BRGO3033 None    T12Q, L19I, N37T, I64V, I72V  
BRGO3034 BRGO3034 None    T12D, L63P  
BRGO3036 BRGO3036 None    T12S, L19I, N37S, R41K, L63A  
BRGO3037 BRGO3037 None    T12P, N37D, K43R, L63P, C67S  
BRGO3038 BRGO3038 None    T12TA, I15V, G16E, N37T, P39S, R41K  
BRGO3040 BRGO3040 None    L19T, E35D, N37D, R41K, K43R, I62V, L63A, A71T, I93L  
BRGO3041 BRGO3041 None    I13V, I15V, L19I, L63S, I64V  
BRGO3042 BRGO3042 None    G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61D, E65ED, V77I, L89M  
BRGO3043 BRGO3043 None    T12P, E35D, M36I, R41K, R57K, D60E, Q61D, L63P, E65D, C67W, L89M T74TI 
BRGO3044 BRGO3044 None    L10V, T12P, E35ED, N37ND, R41RK, K43KR, R57RK, D60E, L63P, C67S, V77I, I93L  
BRGO3045 BRGO3045 None    E35D, M36I, N37S, R41K, R57K, Q61N, L63Q, I72V  
BRGO3048 BRGO3048 None    T12TS, I13V, L19I, E35D, L63P  
BRGO3049 BRGO3049 None    T12S, L19V, L33V, R57K, L63S, I64V  
BRGO3050 BRGO3050 None    I15V, M36L, I62V, L63Q, I64V, C67S  
BRGO3051 BRGO3051 None    T12S, L19I, L33V, N37C, I62V, L63A, I64V, H69Y, I72E  
BRGO3052 BRGO3052 None    I13V, E35ED, K43R, I62V, L63P, A71V, V77I, I93L  
BRGO3053 BRGO3053 None    T12N, G16E, L19V, N37C, L63T, H69K, V77I  
BRGO3054 BRGO3054 None    L33V, L63R, I64V, K70E  
BRGO3056 BRGO3056 None    Q7H, E35D, N37S, I62V, L63P, I72V  
BRGO3057 BRGO3057 None    E35D, N37S, K43R, I62V, L63H, I72V  
BRGO3058 BRGO3058 None    Q18L, E35D, M36I, N37D, I62V, L63P  
BRGO3059 BRGO3059 None    K14KR, E35D, N37S, R41K, L63P, H69Q R87RK 
BRGO3061 BRGO3061 None    T12K, I15V, L19I, M36I, N37K, R41N, H69K, L89M, I93L  
BRGO3063 BRGO3063 None    L10V, T12N, R41RK, L63P, I64V, V77VI, I93L  
BRGO3065 BRGO3065 None    T12N, K14R, I15V, L19I, N37E, K70R, I72M  
BRGO3066 BRGO3066 None    T12N, I15V, L19I, N37E, K70R, I72M  
BRGO3068 BRGO3068 None  M46L  I13M, K14R, L33V, N37ND, R41K, I62V, L63P, I93L  
BRGO3072 BRGO3072 None    T12N, R41K, L63P, K70R  
BRGO3073 BRGO3073 None    I13V, K14R, N37E, L63P, F99L R87S 
BRGO3075 BRGO3075 None    I62V, L63P, K70E, V77I, I93L  
BRGO3076 BRGO3076 None    I15V, G17D, K20R, E35D, M36I, R41K, R57K, Q61N, L63S  
BRGO3077 BRGO3077 None    N37S, K45KR, L63LP, I64V, I93L  
BRGO3079 BRGO3079 None    T12TA, N37S, R41K, I62V, L63A, I64IL  
BRGO3081 BRGO3081 None    N37NS, I62V, L63A, H69K, V82I, I93L  
BRGO3086 BRGO3086 None    N37S, R41K, L63ST  
BRGO3087 BRGO3087 None   L76I I15V, L19T, M36I, N37K, R41N, C67CW, H69K, L89M, I93L  
BRGO3088 BRGO3088 None    I15IV, E35D, N37D, R57K, L63P, I93L  
BRGO3091 BRGO3091 None    T12P, I15V, G16E, E35D, N37T, P39S, I62V, L63P, H69Y  
BRGO3093 BRGO3093 None    E35D, N37NS, L63P, V77VI  
BRGO3094 BRGO3094 None   L33I G17D, P39Q, R41K, R57K, D60E, Q61K, I62V, L63P, I64V, A71T, I93L  
BRGO3100 BRGO3100 None    I64V  
BRGO3101 BRGO3101 None    I15V, G16E, L19I, R41K, I64V G40R 
BRGO3103 BRGO3103 None    I13V, K14R, I15V, G16E, E35D, M36I, I62V, L63T, I64V, E65D  
BRGO3104 BRGO3104 None    T12S, I15V, L19I, E35D, M36I, I62V, L63P, I64L  
BRGO3105 BRGO3105 None    T12A, K14R, I15V, R41K, L63P, H69Q, I72V  
BRGO3109 BRGO3109 None    G17D, R41K, I62V, L63V, H69K, A71T, I93L  
BRGO3111 BRGO3111 None    G16E, E35D, I72V, V77I  
BRGO3112 BRGO3112 None    K14KR, N37C, I62V  
BRGO3116 BRGO3116 None    T12S, L19I, L63A  
BRGO3120 BRGO3120 None    K14E, E35D, M36I, R41K, R57K, Q61N, L63AS, E65D, K70R  
BRGO3121 BRGO3121 None    L10V, I15V, G16E, E35D, I64V, K70R  
BRGO3122 BRGO3122 None    E35D, N37D, R57K, L63P, G68E, A71V, V77I, I93L  
BRGO3126 BRGO3126 None    I15V, L19I, E35D, L63P  
BRGO3129 BRGO3129 None    T12N, L19I, R41K  
BRGO3130 BRGO3130 None    I13V, L63P, H69HQ, I72IR  
BRGO3133 BRGO3133 None    E35D, M36I, R41K, K43R, R57K, Q61D, L63A, E65D, L89M  
BRGO3134 BRGO3134 None    K14R, I15V, G16E, E35D, I64IV  
BRGO3135 BRGO3135 None    T12N, I15V, L19I, M36I, N37E, R57K, E65D, I72V  
BRGO3136 BRGO3136 None    T12S, I62V, L63T, V77I  
BRGO3137 BRGO3137 None    I15V, I62IV, L63P, I64V, I72V, I93L  
BRGO3140 BRGO3140 None    I13V, I15V, K20M, E35D, M36I, N37K, P39T, R41K, K45R, R57K, D60E, Q61D, L63P, V82VI, L89M  
BRGO3141 BRGO3141 None    L10I, T12P, I13V, K14R, G16E, M36I, N37S, R41K, I62V, L63T, H69Q, A71T, I72V, I93L  
BRGO3142 BRGO3142 None    K14R, I15V, E35D, M36I, L63P  
BRGO3143 BRGO3143 None   L33I G17DE, N37S, R41K, D60E, L63P, A71T, I93L  
BRGO3146 BRGO3146 None    I15V, K20R, E35D, M36I, R41K, R57K, Q61D, L63V, E65D, I72R, V82I  
BRGO3147 BRGO3147 None    K14R, L19I, E35D, M36I, R41K, R57K, Q61N, L89M  
BRGO3148 BRGO3148 None    K14KR, I15V, L19S, E35D, M36I, N37ND, R41K, R57K, Q61N, T74S, L89M  
BRGO3149 BRGO3149 None    K14R, G17E, N37E, I62IV, L63AP, E65ED, K70R, V77I, L89F  
BRGO3150 BRGO3150 None   Q58E Q18L, L19Q, L33V, N37C, R41K, L63C, I64V, I72V, I85V  
BRGO3151 BRGO3151 None  M46I, L90M L33I I62V, L63P, G68E, V77I, I93L  
BRGO3155 BRGO3155 None    K43R, L63P, I64V, I72L, V77I  
BRGO3156 BRGO3156 None   K43KT I15V, Q18E, K20R, E35D, M36I, R41K, R57K, Q61N, L63T