Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Rhee (2009)
Title Predictive value of HIV-1 genotypic resistance test interpretation algorithms.
Citation J Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 734
NumPts 641
Subtype B, A, CRF02_AG, C


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Page 1   listing Isolate 1 to Isolate 100 from Total 734 Clinical PR Isolates

CA1290 CA3215 SQV, IDV, NFV 100 M46I, V82A, L90M G73T L10I, I15V, M36I, N37D, K45R, L63P, H69K, I93L  
CA1339 CA3372 IDV, NFV 35 D30N  E35D, M36I, K43Q, I62V, L63S, I64V, E65D  
CA1415 CA9593 IDV, NFV, SQV 151 I54A, V82A K43T L10I, E34Q, L63P, A71V, Q92K  
CA1419 CA3803 SQV, IDV, NFV 104 L90M G73S L63P, A71V, V77I, I93IL  
CA1429 CA8487 IDV 67 M46I, L90M G73ST L10V, I13V, L19I, L63P  
CA1431 CA3829 SQV, NFV 91 M46L, L90M L10F, I84L E35D, M36V, N37E, I62V, L63P, I64L  
CA1435 CA3837 IDV, SQV, RTV, NFV 103 V32I, M46I, V82A, L90M L23I, F53L L10V, T12S, L19Q, M36L, N37S, I62V, L63P, A71V  
CA1445 CA3860 IDV 53 M46ML L10F V11VG, I13V, K20T, N37S, I64V, I93L  
CA1447 CA3864 IDV 99 M46I, V82T, L90M  L10R, I13V, K14KR, L63P, I64V, A71AV, V77I, I93L  
CA1455 CA3884 SQV, NFV 111 I84V, L90M G73S L10I, I15V, L19P, K20I, E35D, M36I, R41K, L63P, A71V  
  CA7737 SQV, NFV, RTV 138 I84V, L90M G73S L10I, I15V, L19P, K20I, E35D, M36I, R41K, I62V, L63P, A71V  
CA1456 CA3886 SQV, IDV, NFV 96 L90M G73T L10LI, E35D, N37S, K45R, L63P, I64V, A71AV, V77I, I93L  
CA1462 CA3901 IDV, NFV 80 L90M  K20I, E35D, M36I, L63Q, I64V, A71V, I72V, I93L  
CA1469 CA3917 SQV, IDV, NFV 119 G48V, I54S, V82A M46V L10I, G16GA, N37D, L63P, A71I, V77I, I93L  
CA1481 CA4245 IDV, NFV, SQV, RTV 106 M46I, L90M G73S K20I, E35D, M36I, I62V, L63P  
CA1491 CA4266 None    E35D, N37T, I62V, L63P, I64L, V77I  
CA1493 CA4270 None    E35D, L63P  
CA1494 CA4272 IDV, RTV, NFV, SQV 99 G48V, I54V, V82A, L90M  L10I, R57K, L63P, A71V, T74S, V77I, I93L  
CA1495 CA4274 SQV, RTV, IDV, NFV 123 L90M G73GS L10I, L63P, V77I, I93L  
CA1496 CA4277 NFV, IDV 91 M46I, I54V, V82A N88D I13V, E35D, M36I, I62V, L63P, A71V, T74S  
CA1498 CA4280 SQV, IDV 117 L90M L10FI, G73S L63P, K70R, A71V, I72L L23LV 
CA1499 CA4282 IDV 58 M46L, L90M G73S N37C, I62V, L63P, A71V, V77I, I93L  
CA1511 CA4327 SQV, APV 36 L90M  L63P  
CA1524 CA4365 SQV 20 G48V, V82A  L10I, I13V, K14KR, M36I, N37D, L63P, A71AT, T74S  
CA1530 CA4383 NFV 49 D30N N88D L10V, T12S, I15V, L19V, K20T, L63P, A71V  
CA1534 CA4396 IDV, SQV, NFV 109 M46I, L90M G73C L10I, D60E, I62V, L63P, I64V, K70R, I72E, V77I, I93L  
CA1551 CA4435 IDV, NFV 160 I54V, V82A F53L I15V, E35D, N37S, L63P, A71V  
CA1554 CA4441 RTV, IDV, SQV 106 M46MI, I54IV, I84V, L90M  K20KR, E35D, M36I, N37T, D60E, Q61E, L63P, I64V, A71AV  
CA1578 CA4503 IDV, NFV 106 D30N Q58E, N88D L19T, K20T, E35D, M36I, L63P  
CA1579 CA4505 IDV, SQV, RTV 79 G48V, I54V, V82A, I84V F53L N37D, L63P, A71AT, V77I, I93L  
CA1582 CA4513 IDV, NFV 66 D30N L10F, N88D L63P, V77I, I93L  
CA1586 CA4521 NFV 23 D30N  R57RK, L63P, I93L  
CA1587 CA4523 IDV 47   L10V, T12TA, I13V, L63P  
CA1590 CA9754 IDV, SQV, RTV, NFV 158 I54V, V82VA, L90M G73GS L10I, T12E, L19I, L63P, A71V, I93L  
CA1592 CA4535 RTV, IDV   K14R, I15V, N37D, L63A, V77I, I93L  
  CA9703 RTV, IDV, NFV 35 M46I, N88S  K14KR, I15IV, N37D, I62V, L63A, V77I, I93L  
CA1617 CA4591 IDV, NFV, SQV, RTV 125 V32I, M46I, I54V, V82A, L90M K43T, F53L L10I, K20R, E35D, M36I, N37E, I62V, L63H, A71LV, I72V  
CA1618 CA4593 None    R57K, L63P  
CA1622 CA4601 IDV, SQV 116 M46L, I54V, V82A, L90M  L10I, K43KR, I62V, L63P, A71V, T74TS, V77I, I93L  
CA1624 CA4605 IDV, SQV, RTV 136 I54IV L24I, L33F, F53L, G73CS, N83D I15V, E34Q, M36L, N37S, L38W, R57K, D60DE, I62V, L63P, A71V  
CA1799 CA4835 IDV 112   K14R, R41K, L63P  
CA1808 CA7442 IDV, NFV 141 M46I, L90M G73S L10I, I15V, K20I, M36I, R41K, I62V, L63P, I72L, I93L  
CA1813 CA4868 IDV 63 M46L, N88S  L10LI, I13V, I15V, E35D, M36I, I62V, L63P, I93L  
CA1821 CA4904 IDV, NFV 125 M46I, I84V, L90M  L10I, I15V, K20T, E35D, N37D, R57K, L63P, C67L, I85V, Q92K  
CA1826 CA4914 IDV, NFV, SQV 82 M46L, G48V, L90LM  N37C, L63A, T74TA, V77I  
CA1846 CA4951 SQV, IDV, NFV 131 I84V, L90M L10F K20I, E35D, M36I, L63P, A71V, I72T  
CA1847 CA4955 None    M36I, I62V, L63P, I64V, H69Y  
CA1850 CA10733 IDV, RTV 136 V32I, M46I, V82A, L90M F53L L10I, L63P, I64M, A71V, L89M, I93L  
CA1853 CA4968 None    E35D, N37S, L63P  
CA1854 CA4970 IDV, SQV, NFV 89   N37S, R41K, Q61H, L63HP, V77VI  
CA1859 CA4980 IDV 118 V32I, M46I, I47V  L10I, I13V, L63P, I64M, C67S, V77I, I93L  
CA1863 CA4989 None    N37S, I64V  
CA1866 CA4995 IDV 56 L90LM  R57K, L63P, A71V, I72E, V77I, I93L  
CA1869 CA4999 IDV, SQV, RTV 125 M46L, V82A L24I L10I, I15V, R41K, L63P, T74S  
CA1872 CA5005 IDV, SQV, NFV 105 M46I, I54V, V82A L24I L10I, L63A, I64V  
CA1963 CA7524 IDV, NFV 142 M46I, V82A L89V L10I, I13V, L19I, N37D, G51A, D60E, L63P, A71V, I93IL  
CA2082 CA7709 RTV 46 V82VA  I64V, V77I, I93L  
CA2091 CA7727 RTV, SQV 113   L63RS, I64V  
CA2097 CA7745 NFV, IDV 93 M46L, V82T, L90M  L10I, I62V, L63P, T74S, I93L  
CA2206 CA7999 SQV, IDV 184 M46I, I84V, L90M G73C L10I, L24M, N37H, I62V, L63P, I64V, T74S, V77I, I85IV, I93L  
CA2213 CA8019 IDV, NFV 115 M46I, I54V, V82T, L90M  L10I, E35D, N37D, L63P, I64V, C67S, A71V, I72V, I93L  
CA2251 CA8165 IDV 63 M46I, L76V  I13V, E35D, N37D, Q61N, L63P, I64V, V77I  
CA2256 CA9531 SQV, RTV, IDV 80 I54V, V82A, L90M  L10I, I15V, K20M, M36I, N37D, L63P, A71V, Q92QK  
CA2258 CA8183 IDV 128 M46L, V82A V11I, L24I L10I, M36V, N37S, I62V, L63P, A71V, V77I, I93L  
CA2262 CA8193 IDV, SQV, NFV 114 V32I, M46MI, I47V  I15IV, E35D, M36MI, N37E, R41K, L63P, K70T, V77I, I93L  
CA2313 CA8441 None    Q7QH, L63P, V77I, I93L  
CA2314 CA8404 RTV, SQV, IDV, NFV 148 I54V, V82A, L90M L33F, Q58E L10LI, I13V, K14R, E35D, M36IL, N37DE, R57K, I62V, L63P, T74TS  
CA2315 CA8406 None    K14R, E35D, N37S, R41K, L63P  
CA2322 CA8422 None    L19Q, N37S  
CA3879 CA9654 IDV, NFV 89 D30N  T12P, L19I, L63P, A71AITV, Q92E  
CA3886 CA9662 NFV 14 D30N  E35D, M36I, N37T, I62V, L63P  
CA3893 CA9650 IDV 127   L10V, I13V, L33V, N37A, P39S, I64V, K70R  
CA3908 CA9510 None    L19V, I62V, L63P, I93L  
CA3914 CA9457 NFV 77 M46I L33I, T74P L10LI, R41K, I62V, L63P, A71T, I72V, V77I, I93L  
CA3920 CA9693 IDV, NFV 113 D30N N88D I13V, N37CS, L63P, I64V, A71V, V77I  
CA3963 CA9547 SQV, RTV, IDV, NFV 172 I84V, L90M  L10I, I13V, K14R, K20T, L63P, A71V, V77VI  
CA3968 CA9722 IDV, SQV 157 M46MI, N88S  L10I, I15V, Q18H, L63P, T74S, I93L  
CA3969 CA9731 IDV 153 V32I, M46I, I47V, V82A K43T N37D, I64V  
CA3970 CA9732 IDV, NFV 140 D30N L33I R41K, L63P, I93L  
CA3983 CA9562 SQV, IDV, NFV 158 D30DN, L90M N88D R41K, K43R, K45R, L63P, A71V, I72V, V77I, I85IV, Q92K  
CA3984 CA9561 NFV 32   E35D, R41K, D60E, I62V, L63P, I93L  
CA4060 CA9775 None    I15V, G16E, E35D, N37S, I62V, L63P  
CA4062 CA9760 IDV, SQV, RTV 115 M46L, I84V, L90M L10F, V11VI, F53FL, G73GS K20I, R41K, L63LP, A71IT, I72IR  
CA4074 CA9576 Unknown, IDV 133 M46L, I54V, V82A  K55KR, I62IV, L63P, A71AV, I93L  
CA4091 CA9794 IDV, NFV 168 M46I, L90M G73GA I64V, V77VI  
CA4100 CA9800 None    E35D, L63P  
CA4129 CA9821 None    T12A, I13V, L19I, L63P  
CA4144 CA9961 RTV, NFV 158 I54V, V82A, L90M  K20R, E35D, M36I, N37D, D60DE, L63P, A71V, I93IL  
CA4159 CA9986 IDV, NFV 111 D30N N88D Q2QH, I13V, L19I, K20I, E35N, M36I, N37D, D60E, Q61E, L63P, A71V, I72T  
CA4164 CA10001 IDV 52   I15V, E35D, M36I, N37D, L63P, I93L  
CA4166 CA10003 NFV 103 D30N N88D I13V, E35D, M36I, L63P, A71AITV, I93IL  
CA4285 CA10665 IDV 97   R57K, D60E, Q61E, L63P, V77I, I93L  
CA4303 CA10696 IDV 160 M46L, I54V, V82A, L90M  L10I, I15V, K20R, E35D, M36I, N37D, R57K, I62V, L63P, I85V, I93L  
CA4307 CA10699 IDV, SQV, RTV 153 M46I, G48V, I54V, V82T  Q7QH, L10V, I15V, L19I, M36I, N37S, I64V  
CA4315 CA10710 IDV 139 M46L, V82A L24I L10I, I15IM, K20I, E35D, M36I, K55KR, L63P, I64V, V77I D25DG, D29DAGV 
CA4316 CA10711 IDV 122 M46ML, L90M  I13IV, E35D, M36I, N37D, R57K, L63P, A71T, I72V, I93L  
CA4330 CA10730 RTV, IDV, NFV 170 M46I, N88S  L63P  
CA4333 CA10734 IDV, NFV 148 M46I, V82T L24I, Q58E L10I, K20I, M36V, L63P, I64V, A71V, I93L  
CA4341 CA10747 NFV 91 L90M  K20I, E35D, M36MI, I64V, A71AV  
CA4354 CA10762 IDV 166 V32VIL, M46I, V82VA, I84IV L10F, T74TP L63PT, I64V, A71AV, L89M