| Subject | Isolate | PIs | Wks | PIMajor | PIMinor | Common | Unusual |
|---|
| 1 | TCHAD-1 | None | | | | I15V, G16A, N37E, R41K, K43R, D60E, Q61E, I62V, L63N, C67E, H69K, V77I | |
| 10 | TCHAD-10 | None | | | | K14R, I15V, L19Q, K20R, E35D, M36I, R41K, R57K, L63V, I64M, E65D, L89M | |
| 17 | TCHAD-17 | IDV | 26 | M46I, I84V | | L10I, I13V, K14R, I15V, K20I, M36I, R41K, R57K, L63P, I66F, H69N, I72V, L89I | |
| 19 | TCHAD-19 | None | | | | I13V, G16E, L19I, E35N, M36I, N37D, R41K, K45R, R57K, L63H, H69K, I72V, V75I, L89M | |
| 22 | TCHAD-22 | None | | | | T12R, G16A, M36I, N37D, D60E, Q61E, L63T, C67E, H69K, V77I, L89M | |
| 24 | TCHAD-24 | None | | | | G16A, R57K, D60E, Q61E, L63T, C67E, H69K, V77I | |
| 26 | TCHAD-26 | None | | | G73S | T12I, I13V, K14R, G17E, K20I, E34K, M36I, N37D, R41K, Q61N, I62M, L63A, C67E, H69K, K70R, V77I, L89M | |
| 28 | TCHAD-28 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63A, T74S, L89M | |
| 30 | TCHAD-30 | None | | | | M36I, N37D, R41K, D60E, I62V, L63P, I64V, C67S | |
| 33 | TCHAD-33 | IDV | 26 | | | L10I, I13V, G16A, K20I, E35D, M36I, R41K, H69Q, L89M | |
| 35 | TCHAD-35 | None | | | | I13V, K14R, L19Q, E35D, M36I, R41K, Q61H, H69K, L89M | |
| 39 | TCHAD-39 | IDV | 26 | | | T12P, L19V, M36I, N37D, R41K, D60E, L63P, I64V, C67S | |
| 4 | TCHAD-4 | None | | | | I13V, K14R, G16E, L19V, K20I, E35D, M36I, R41K, K43R, H69K, L89M | |
| 40 | TCHAD-40 | None | | | | L10I, I13V, K14R, I15V, G16E, L19T, K20I, M36I, R41K, L63S, H69N, L89M | |
| 47 | TCHAD-47 | None | | | | G16A, N37H, L38I, D60E, Q61D, L63T, C67E, H69K, V77I | |
| 48 | TCHAD-48 | IDV | 26 | V82T | | I13V, K20I, M36I, R41K, I66F, H69K, K70R, L89M | |
| 53 | TCHAD-53 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M | |
| 54 | TCHAD-54 | None | | | | I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M | |
| 58 | TCHAD-58 | None | | | | G16A, N37H, L38I, R41K, D60E, Q61G, L63T, C67E, H69K, V77I | |
| 59 | TCHAD-59 | None | | | | L10V, I13V, L19P, K20I, E35D, M36I, R41K, L63S, H69K, L89M | |
| 60 | TCHAD-60 | None | | | | L10I, T12R, I13V, K14R, I15V, L19I, K20I, M36I, R41K, H69N, L89M | |
| 64 | TCHAD-64 | None | | | | I13V, K14R, L19I, K20I, M36I, R41K, H69K, T74S, L89M | |
| 65 | TCHAD-65 | IDV | 26 | L90M | | L10I, I13V, I15V, L19M, K20I, M36I, L63R, I64M, H69N, L89M | |
| 66 | TCHAD-66 | None | | | | T12A, I15V, G16A, N37D, R57K, D60E, Q61D, L63T, C67E, H69K, V77I, L89I | |
| 67 | TCHAD-67 | None | | | | I13V, K20R, E35D, M36I, R41K, H69K, L89M | |
| 68 | TCHAD-68 | IDV | 26 | M46I, L76V | | T12P, I15V, L19V, K20I, E35N, M36I, N37D, R41K, R57K, D60E, I62V, L63P, I64V, K70R, I85V | |
| 69 | TCHAD-69 | None | | | | I13V, K14R, K20I, M36I, N37S, R41K, Q61N, C67S, H69K, V82I, L89M | |
| 70 | TCHAD-70 | IDV | 26 | M46L, V82A | F53L | G16A, N37D, D60E, Q61G, L63T, C67E, H69K, A71T, I72T, V77I | |
| 71 | TCHAD-71 | None | | | | K20R, E35D, M36I, R41K, L63A | |
| 72 | TCHAD-72 | None | | | | I15V, G16A, E35D, N37D, D60E, Q61N, L63T, C67E, H69K, V77I | |
| 74 | TCHAD-74 | None | | | Q58E | T4S, K14R, I15V, K20R, E35D, M36I, R41K, L89M | |
| 75 | TCHAD-75 | None | | | | L10V, K14I, I15V, L19Q, K20R, E35D, M36I, R57K, L63V, L89M | |
| 76 | TCHAD-76 | None | | | | T12I, I13V, K14R, G17E, K20I, E34K, M36I, N37D, Q61N, I62M, L63T, C67E, H69K, I72V, V77I, L89M | |
| 78 | TCHAD-78 | IDV | 26 | | | L10I, T12K, I13V, K14R, G16E, L19P, K20V, E35D, M36I, R41S, C67Y, H69K, L89M | |
| 8 | TCHAD-8 | IDV | 26 | V82A | | L10I, T12S, I15V, L19I, E35D, M36I, R41K, L63P, K70E, A71T, I93L | |
| 80 | TCHAD-80 | None | | | | I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89M | |
| 85 | TCHAD-85 | None | | | Q58E | T4S, K14R, I15V, K20R, E35D, M36I, R41K, L89M | |