<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kousiappa (2009)
Title Genetic analysis of HIV type 1 strains from newly infected untreated patients in Cyprus: high genetic diversity and low prevalence of drug resistance.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 37
NumPts 37
Subtype A, B, C, CRF02_AG, D, CRF01_AE

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CY004 CY004 None None  V179D V35T, E36IV, T39E, S48T, K122E, D123G, E138A, A158S, K173A, D177E, G196Q, T200A, Q207D, R211K, F214L, V245Q, E248N, A272P, K277R, L279M, E291D, V292I, I293V  
CY005 CY005 None None   I135T, S162A, Q197H, R211RG, V245Q, V292I, K311KR  
CY006 CY006 None None   I135T, E169A, K173E, Q207E, F214L, V245M, I293V  
CY007 CY007 None None   V35T, E40D, K49R, V60VI, K122E, I135T, S162C, R172K, D177E, I178L, T200A, E204K, Q207E, F214L, V245T, D250E, S251N, A272P, K277R, T286A, V292I, I293V  
CY008 CY008 None None   K20R, V35T, K49R, V60I, D123E, I135T, T165TI, E169D, K173S, Q174QHKN, D177E, I178L, V179I, T200A, Q207A, R211S, V245Q, D250E, I274IV, K277KR, K281KR, T286A, E291D, V292I, I293V, P294T, E297EK, E312D  
CY009 CY009 None None   V35T, E36ED, T39KN, V60I, D123E, I135T, K166KR, K173I, Q174K, D177E, V179I, T200A, Q207A, R211S, V245K, D250E, K277R, T286A, E291D, V292I, I293V, P294T, E312D  
CY010 CY010 None None M41ML  R83K, T139S, S162C, T200A, A272S, K277R, T286A, E291D, V292VI, E297T  
CY012 CY012 None None   V35T, V60I, K64R, K122E, D123N, I135T, E138EA, I142IT, K173L, Q174K, D177E, I178M, V179I, Q207A, R211S, F214FL, V245K, D250E, A272P, K281R, T286A, E291D, V292I, I293V, P294T, E297K, E312D  
CY013 CY013 None None   K122E, D123G, E169D, N175H, T200TA, R211K, A272P, K277R, P294T, E297Q, E328D  
CY014 CY014 None None   K122E, D123DGNS, E169D, N175H, R211K, A272P, K281R, P294H, E297Q, E328D  
CY015 CY015 None None   V35M, T39N, V60I, D123E, I135T, K173I, Q174K, D177E, V179I, T200V, Q207A, R211S, V245K, D250E, K277R, T286A, E291D, V292I, I293V, P294T, E312D, I326V  
CY016 CY016 None None   T39TI, D123X, S162C, Q174H, D177E, I178IM, R211K, A272G, T286A, K311KN, D324E  
CY035 CY035 None None   V35I, I135L, S162G, V245VI, Q278H, T286A, I293V, E297A, I329L  
CY048 CY048 None None   V35T, T39M, D121H, K122E, D123E, I135T, I142IV, A158AS, S162A, K173T, Q174K, D177E, T200A, Q207G, R211K, V245Q, K281R, L283I, T286A, E291D, V292I, I293V, P294T, S322T, I326V  
CY057 CY057 None None   K11T, V35T, T39K, E40D, K122E, D123S, A158S, K173L, Q174K, N175H, D177E, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, D324E, I326V, Q334P  
CY058 CY058 None None   K11T, V35T, E36D, T39M, K122E, D123S, A158S, K173L, Q174K, N175NH, D177E, Q207A, R211S, V245T, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, D324E, I326V  
CY066 CY066 None None   E6D, K46KN, A98S, I135L, T139A, G196E, T200I, R211K, A272P, E297EK  
CY073 CY073 None None   V35T, E36A, T39E, V60I, T107TS, V111I, D121Y, K122E, I135V, E138A, S162A, K173A, Q174K, D177E, V179I, T200A, Q207E, R211RK, V245Q, A272P, K281R, T286A, E291D, V292I, V317A  
CY089 CY089 None None   K20R, A98S, D123E, I142V, Q174EK, D177E, I178L, F214L, K277R, T286A, A288S, E297A  
CY109 CY109 None None   T69S, V90VI, D121Y, K122E, I135T, D177E, R211Q, I244V, V245M, A272P, K277R, P294T, Q334E  
CY111 CY111 None None  Y188N K11A, V35T, K122E, D123N, I135T, I142V, E169D, Q174K, D177E, T200A, Q207A, E248D, T286A, V292I, I293V, P294T, I326V N175I, L187C 
CY112 CY112 None None   K11A, V35T, K122E, D123N, I135T, I142V, E169D, K173T, Q174K, D177E, T200A, Q207A, V245VEKM, T286A, V292I, I293V, P294T, A327V E248NY 
CY142 CY142 None None   V35I, V106I, D123E, E169K, K173E, I178L, G196E, R211S, F214L, K277R, I293V, E297K, G333E  
CY153 CY153 None None   V35A, T39A, V60I, K122E, D123S, I135T, T139TA, I142IT, S162C, K173S, Q174K, D177E, Q207A, R211S, V245E, D250E, K281R, T286A, E291D, V292I, I293V, P294T  
CY158 CY158 None None   V35T, E36D, T39LS, I135V, S162A, F171Y, K173T, Q174DEKN, D177E, I178M, T200A, E204EK, Q207A, R211S, V245Q, D250E, K275Q, K277R, T286A, E291D, I293V, E312D, V317VA, S322T, I326IV  
CY159 CY159 None None   V35I, A98S, I135V, Q207K, V245M, A272P, K277R, T286A, E297V, V314VA, V317A, I326V, Q334L  
CY166 CY166 None None   V35T, E36A, T39E, S48T, E53ED, K122E, D123N, I142V, K166R, K173A, D177N, T200E, Q207EGKR, R211K, V245Q, D250E, A272P, K277R, V292I, I293V, E297A, Q334E T27TK 
CY169 CY169 None None M184V  K11AT, T27S, V35T, E36D, T39EK, V60VI, K64KR, K122E, D123N, I135T, K173L, Q174K, D177E, T200I, I202IV, E203ED, Q207A, R211S, V245X, E248D, A272P, T286A, E291D, V292I, I293V, P294T, V317VA, I326V  
CY170 CY170 None None   K11T, K20R, V35T, E36D, T39K, K122E, D123S, I135T, S162C, K173L, Q174K, D177E, I178IM, T200I, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V  
CY171 CY171 None None   K11A, V35T, E36D, T39N, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, T200TI, Q207AT, R211S, V245IK, E248D, A272P, T286A, E291D, V292I, I293V, P294T, I326V  
CY172 CY172 None None   P4S, V35K, E36D, V60VI, S162A, E169ED, K173T, Q174K, D177E, T200A, Q207X, R211K, F214FL, V245Q, K275R, T286A, E291D, V292I, I293V, P294T, S322A, I326V, Q334L K13R 
CY173 CY173 None None   K11T, K20R, V35T, E36D, T39K, K122E, D123S, I135T, S162C, K173L, Q174K, D177E, T200I, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V  
CY175 CY175 None None   V35T, E36EA, T39E, E40EG, K102R, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245K, D250E, A272P, K277R, E291D, I293V, P294S  
CY176 CY176 None None   V35T, T39E, K122E, D123S, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245K, D250E, A272P, K277R, E291D, I293V, P294S  
CY177 CY177 None None   V35I, T39A, K122E, I135T, I142AV, K166R, G196E, I202V, R211K, V245E, A272P, V276I, Q278E, L283I, K287R, I293V, P294S  
CY178 CY178 None None   V35T, V60I, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, Q207A, R211K, L228LF, V245K, L246LMV, D250E, K263KR, Q278QH, K281R, T286A, E291D, V292I, I293V, P294T, E312N, A327AV Q222Q*, V241VG, K259KT, N306NI, K311KI, E328E*, I329IMR 
CY179 CY179 None None   E6D, V35T, T39K, K43E, K122E, D123S, I135T, S162Y, K173I, Q174K, D177E, Q207A, R211S, K238R, V245E, K275Q, V276I, T286A, E291D, V292I, I293V, P294T, E312T, P321S, D324E, I326V, I329V  

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