Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Ndembi (2008)
Title Transmitted antiretroviral drug resistance surveillance among newly HIV type 1-diagnosed women attending an antenatal clinic in Entebbe, Uganda.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 50
NumPts 50
Subtype A, D, B, C, CRF10_CD

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
IAEAM003 IAEAM003 None None   K11T, V35T, K122E, D123N, K173S, D177E, V179I, T200A, Q207A, R211S, F214L  
IAEAM004 IAEAM004 None None   V35T, V60I, K101Q, D121H, K122E, I135T, E138A, I142V, K166R, K173A, Q174R, D177N, V179I, I202V, Q207D, R211S, F214L  
IAEAM007 IAEAM007 None None   E6Q, K20R, V21I, V35T, V60I, K122E, D123S, K173S, Q174K, D177G, V179I, T200A, I202V, Q207A, R211S  
IAEAM009 IAEAM009 None None   D17E, V35T, T39M, E40D, V60I, Q207E, R211K  
IAEAM012 IAEAM012 None None   E6D, V35T, V60I, K102Q, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S K73N 
IAEAM013 IAEAM013 None None   K20R, V21I, V35T, T39A, E40G, K49R, K122E, D123S, T165V, K173S, D177E, T200A, I202V, Q207A, R211S, F214L  
IAEAM014 IAEAM014 None None   K11Q, V35T, T39L, V60I, D121HY, D123S, A158S, K173A, Q174K, D177E, V179I, Q207A, R211S K122G 
IAEAM016 IAEAM016 None None   I31V, V35K, V60I, K66KR, D121Y, K122E, D123G, D177E, I178M, V179I, Q207G, R211K K49KRT 
IAEAM019 IAEAM019 None None   K20R, V21I, K32I, V35T, T39R, V60I, K122E, D123N, I135M, E138A, S162W, K173S, D177E, V179I, T200A, I202V, Q207A  
IAEAM020 IAEAM020 None None   E6K, K11N, V35T, E36A, T39E, K122E, D123G, I142V, A158S, K173T, D177E, T200A, Q207E  
IAEAM021 IAEAM021 None None   K22R, V35T, K49R, V60I, R83K, T107S, D121Y, K122E, D123E, I135T, T165I, D177E, I178M, T200I, Q207G, R211K  
IAEM010 IAEM010 None None   K49R, V60I, D121Y, K122E, T200I, E203D, Q207E, R211K  
IAEM011 IAEM011 None None   V35T, E40D, K49R, V60I, K122E, D123N, D177E, I178M, T200I, E204K, Q207E, R211K  
IAEM017 IAEM017 None None   I5IV, K20R, V21I, V35T, T39S, K122E, I135T, E138A, K173S, Q174K, D177E, V179I, T200A, I202V, Q207D, R211K  
IAEM022 IAEM022 None None   K11T, K20R, V35T, T39R, K43Q, K122E, D123S, K173S, D177E, V179I, T200K, I202V, Q207A, R211S  
IAEM026 IAEM026 None None   E6N, V8I, V35T, E40D, K49R, V60I, K122E, D177E, Q207E  
IAEM028 IAEM028 None None   E6D, K11Q, V35T, K122E, D123N, S162Y, K173L, Q174K, D177E, V179I, Q207T, R211N  
IAEM030 IAEM030 None None   V35T, T39I, E40D, K49R, V60I, D123E, T139K, I142T, E169D, D177E, I178M, T200I, Q207G, R211K  
IAEM031 IAEM031 None None   V21I, V35T, T39A, E40D, D123S, K173A, Q174K, D177E, V179I, T200A, Q207A, R211K  
IAEM033 IAEM033 None None   V35T, E40D, K49R, V60I, K122E, D123S, I135T, F171Y, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S  
IAEM034 IAEM034 None None   V35T, E40D, K49R, V60I, D121Y, K122E, E169D, D177E, Q207E, R211K  
IAEM035 IAEM035 None None   K20R, V35I, T39K, E40V, K43E, V60I, K101Q, D121Y, K122E, I142V, Q174E, D177E, Q207E  
IAEM036 IAEM036 None None   E6T, V35T, K49R, V60I, K82R, S105A, D121Y, K122E, I135T, I142V, D177E, I178M, G196R, T200I, Q207E, R211K N136H, N137Y, Q145L 
IAEM038 IAEM038 None None   V35T, V60I, K122E, D123N, I135T, T165I, K173S, Q174K, D177E, V179T, V189I, T200K, Q207A, R211S, F214L E40N 
IAEM039 IAEM039 None None   K11T, V35T, E36D, E40D, K49R, V60I, K122E, D123N, I135T, E138G, T165I, K173T, Q174K, D177E, I178V, V179I, G196E, T200A, I202V, Q207A, R211S, F214L  
IAEM041 IAEM041 None None   V35T, D123S, I135T, S162A, K173S, T200A, Q207A, R211S  
IAEM042 IAEM042 None None   V8I, V35K, V60I, D121Y, K122E, D123G, I135T, D177E, T200R, Q207E, R211K  
IAEM043 IAEM043 None None   K11T, K20R, V35T, T39K, K49R, K122E, D123S, S162N, K173R, Q174K, V179I, I202V, Q207A, R211N  
IAEM045 IAEM045 None None   V35T, T39L, V60I, K64R, K122E, D123S, I135T, E138A, I142V, E169D, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, F214L  
IAEM047 IAEM047 None None   V35T, E40D, V60I, K122E, D123G, I135T, D177E, T200I, Q207E, R211K  
IAEM048 IAEM048 None None   K20R, V35I, E40D, K43R, V60I, D121Y, K122E, D123E, I159V, K173S, Q174K, D177E, I178M, Q197K, T200I, Q207E W239L 
IAEM049 IAEM049 None None   K11T, K20R, V21I, V35T, V60I, K122E, D123G, K173S, Q174R, D177E, I178M, V179I, T200A, Q207A, R211S  
IAEM050 IAEM050 None None   V8I, K11T, K20R, V21I, V35T, T39R, K49R, K122E, D123N, I135T, E169A, K173S, D177G, V179I, I202V, Q207A, E224D  
IAEM054 IAEM054 None None   V35T, E40D, I135T, K173S, Q174K, D177E, V179I, T200E, Q207A, R211S Q182R 
IAEM056 IAEM056 None None   K20R, V21I, V35I, K173S, D177E, V179I, T200A, I202V, Q207A, R211S  
IAEM057 IAEM057 None None   V35T, V60I, D121Y, K122E, I159V, K173R, D177E, I202V, Q207A, R211K, F214L  
IAEM060 IAEM060 None None   I5V, E6D, V35T, E40D, V60I, K122E, D123S, I135T, I142V, K173L, Q174K, D177E, V179T, I202V, Q207G, R211S, F214L G141R 
IAEM061 IAEM061 None None   P4S, E6D, K11T, V35T, T39R, D121Y, K122A, I142V, S162A, D177E, Q207E, R211K  
IAEM064 IAEM064 None None   V35T, S48T, V60I, K122KE, D123NS, I142V, D177E, I178M, T200I, Q207E, R211K  
IAEM065 IAEM065 None None   V35T, E40D, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, Q207E, R211S  
IAEM066 IAEM066 None None   V21I, K32E, V35I, K49R, V60I, D121Y, K122E, I135R, D177E, T200I, Q207G, R211K  
IAEM067 IAEM067 None None   E6D, V35T, V60I, K122E, D123S, I135T, K173S, Q174K, D177E, T200A, I202V, Q207E, R211S, F214L  
IAEM068 IAEM068 None None   V35T, K49R, D121C, K122E, T165I, R172K, D177E, I178M, T200I, Q207E, R211K  
IAEM069 IAEM069 None None   V21I, T27S, V35T, T39K, V60I, I135V, Q145V, D177E, T200A, I202V, Q207E, R211K  
IAEM070 IAEM070 None None   V35I, K49R, V60I, D121Y, K122E, I135T, D177E, I178M, T200I, Q207G, R211K, F214L  
IAEM071 IAEM071 None None   V35I, K49R, V60I, D121Y, K122E, I135T, D177E, I178M, T200I, Q207G, R211K, F214L  
IAEM074 IAEM074 None None   K11T, V35T, E40D, V60I, D177E, I178M, Q207K, R211K  
IAEM075 IAEM075 None None   V35T, E40A, K43T, K49R, V60I, D121Y, K122E, D177E, Q197K, T200I, Q207G  
IAEM077 IAEM077 None None   K20R, K32R, V35T, T39K, K49R, V60I, D121Y, K122E, I135T, S162C, D177E, T200I, Q207E, R211K  
IAEM078 IAEM078 None None   V35T, K49R, I50V, V60I, T69S, D121H, K122E, D123S, I135T, I142V, T165I, E169D, K173S, Q174K, T200A, Q207A, R211K, F214L  

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