<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Aghokeng (2007)
Title Full-length sequence analysis of SIVmus in wild populations of mustached monkeys (Cercopithecus cephus) from Cameroon provides evidence for two co-circulating SIVmus lineages.
Citation Virology
SelectedGene RT
SelectedSpecies NHPL
NumIsolates 5
NumPts 5
Host Mustached monkey


Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CM1239 01CM1239 None None V75I, Y115F, F116Y, T215Q, K219D, N348I K103H, V108I, Y181I, Y188L, M230L T7P, V8I, K11A, P14E, E28Q, V35E, E36G, T39Q, E40Q, K46Q, S48E, K49E, E53D, T58S, K64R, S68K, T69S, K73M, E79Q, D86E, K101A, K102E, K104E, L109V, V111I, K122P, D123A, I132L, I135V, E138Q, G141A, I142R, N147K, A158T, S162Y, S163T, T165A, E169Q, K173E, Q174A, V179T, I180L, V189I, D192N, G196S, T200R, I202V, E203A, E204Q, Q207N, R211K, F214I, D218E, H221Y, E224D, L228Q, T240K, V241I, I244V, V245T, E248Q, K249Q, D250E, S251N, A272P, I274V, V276T, L282C, L283I, T286V, A288S, I293V, P294Q, E300Q, E312Q, P313A, H315Q, V317A, Y319F, S322E, K323Q, D324P, I326V, K331S, Q332L, Q334D, G335S, I341F, Y354F, R356K, M357V, G359S, A360V, T369S, E370D, V372I, K374R, A376G, T377R, I380L, T386P, K390R, L391I, I393V, E399D, Y405H, A408V, T409S, E413D, N418H, P421H, V423L, K424R, Y427F, K431P, I434L, V435S, G436E, F440Y, N447H, R448K, T450S, D460N, R461T, R463K, Q464E, T470E, D471N, T477A, Q480E, I482V, H483L, Q487K, D488E, S489G, L491P, E492S, A502V, I506V, A508S, K512E, Q520E, K527T, A534S, A554H P9K, M16A, D17K, K20M, C38V, E42L, E44L, G45D, V60C, K82E, R83A, W88T, S105H, G112K, T131S, S134Q, T139G, Y146F, M164A, I167L, P170E, F171I, L193R, Q197G, K201V, L205I, H208M, W212L, P225Y, F227V, D237R, K238G, S268A, I270A, V292E, R307Q, Q330V, T338G, Q340N, Y342L, E344N, P345K, F346~, K347G, T351S, D364S, V365Y, K366Q, Q373A, P387P_E, F389V, Q394I, T397Q, A400Q, W414I, F416A, P420T, L425Q, Q428T, E430V, E438P, E449V, G490P, V493M, Q507A, D511Q, E514T, E516P, S519E, E523Q, I526L, K530A, Q547D, K558Q 
CM1246 01CM1246 None None V75I, Y115F, F116Y, T215Q, K219D V108I, Y181V, Y188L, M230L I2V, V8L, V10I, K11S, P14E, T27S, E28K, K32E, V35K, T39Q, E40K, K46Q, I47L, S48E, K49E, T58S, K64R, S68K, K73M, D86E, A98S, K101A, K102Q, L109V, D123E, I132V, I135V, G141A, I142K, Y144F, N147K, A158T, S162A, S163T, T165A, Q174D, P176Q, V179L, V189I, Q197E, T200R, I202V, E203K, E204K, Q207D, H208L, L210S, R211S, F214I, D218E, E224D, T240R, V241I, Q242K, I244V, V245E, E248D, K249Q, S251T, D256E, I270V, A272S, V276T, Q278H, K281R, L282C, L283I, A288G, V292L, I293V, P294E, T296S, E300Q, E312Q, P313E, V314A, V317A, S322E, D324P, I326V, K331S, Q332L, Q334E, I341F, E344D, K350R, Y354F, R356K, M357I, G359T, T362S, T369A, V372L, K374R, I375A, A376S, T377K, S379A, I380L, K390R, L391I, I393V, E399D, A400N, T403A, E404D, Y405S, A408T, E413D, N418H, P421Y, V423L, K424R, Y427F, K431P, V435E, F440Y, E449N, T450S, K454R, Q464E, K465R, V466A, V467I, S468N, T470E, D471N, K476Q, T477A, H483L, S489G, L491P, I495L, D511E, L525M, K527S, E529N, V531I, L533I, A534S, W535R, Q547E, A554R P4E, I5A, T7E, P9P_VTSLMPTAPP, G15R, M16K, D17K, K20M, C38T, E42I, E44L, I50A, E53N, E79K, K82E, R83V, W88A, L92T, K104A, S105H, V111M, G112Q, K126P, T131S, S134A, E138M, T139G, Y146F, M164T, I167L, P170Q, F171V, I178A, L193R, K201L, L205I, W212K, K223P, P225Y, F227V, L228E, D237K, K238G, S268A, T286I, E298Q, H315G, A327L, Q330V, G335Q, T338G, Q340T, Y342T, P345R, F346~, K347N, N348M, D364P, V365Y, K366Q, Q373S, I382C, P387P_D, F389C, Q394V, T397Q, W414I, F416A, L425Q, Q428T, E430V, G436T, E438P, R463Q, Q487M, G490P, V493M, Q507T, Q509A, K512V, E516P, S519E, E523Q, I526L, K530A, Y532F, K550H, K558Q 
CM2500 01CM2500 None None V75I, Y115F, F116Y, T215Q, K219E V108I, Y181V, Y188L, M230L I5L, T7P, P14A, D17E, T27S, E28K, K32E, V35E, T39Q, E40R, K46Q, I47L, S48E, K49E, I50T, E53Q, T58S, K64R, S68K, T69S, K73M, W88S, A98S, K101S, L109V, V118I, D121Y, K122E, D123E, I132V, I135V, G141A, I142K, N147K, A158T, S162A, S163T, T165A, Q174E, P176Q, V179L, V189I, Q197E, T200R, I202V, E203K, E204R, L205V, Q207D, H208L, R211S, F214I, D218E, K223Q, E224D, D237G, T240R, V241I, Q242R, I244V, V245E, E248D, K249Q, D250E, S251T, D256E, A272S, V276T, Q278H, L282C, L283I, T286V, V292T, I293V, P294E, E300Q, E312Q, P313E, V317A, S322E, D324P, K331S, Q332L, Q334E, I341F, Y354F, R356K, M357V, G359T, T362I, T369A, V372L, I375A, T377R, I380L, K390R, L391I, I393V, E399D, T403A, Y405S, A408T, I411V, N418H, P421H, V423L, K424R, Y427F, K431P, I434L, V435E, G436A, F440Y, E449N, T450S, K454R, Q464E, V466A, V467I, T470E, D471N, T477A, H483L, L484M, S489G, L491P, E492K, D511E, K512T, Q520K, K527T, V531I, A534S, Q547E, A554K V8T, P9K, K11G, M16K, K20M, C38T, E42L, E44L, V60A, E79K, K82E, R83A, L92T, K104A, S105H, V111M, G112Q, K126P, T131S, E138L, T139G, Y146F, M164T, I167L, P170Q, F171I, I178A, L193R, K201L, L210T, W212K, P225Y, F227V, L228E, K238G, S268A, E298Q, L310M, H315K, A327L, Q330V, G335Q, T338G, Q340T, Y342T, P345K, F346~, K347N, N348M, D364T, V365Y, K366Q, Q373A, I382C, P387P_D, F389C, Q394V, T397Q, A400H, W414I, F416A, L425Q, Q428T, E430V, E438P, R463Q, S468D, Q487T, G490P, V493M, Q507T, Q509A, E516P, S519E, E523Q, I526L, K530A, E546Q, K550H, K558Q 
CM2554 01CM2554 None None Y115F, F116Y, T215Q, K219E V108I, Y181V, Y188L, M230L W88S, A98S, K101S, L109I, V118I, D121Y, K122E, D123E, I132V, S134C, I135V, G141A, I142K, N147K, A158T, S162A, S163T, T165A, Q174D, P176Q, V179L, V189I, Q197E, T200R, I202V, E203K, E204R, L205V, Q207D, H208L, R211S, F214I, D218E, K223Q, E224D, D237G, T240R, V241I, Q242R, I244V, V245E, E248D, K249Q, D250E, S251T, D256E, A272S, V276T, Q278H, L282C, L283I, T286V, V292T, I293V, P294E, E300Q, E312Q, P313E, V317A, S322E, D324P, K331S, Q332L, Q334E, I341F, Y354F, R356K, M357V, G359T, T362I, T369A, V372L, I375A, T377R, I380L, K388R, K390R, L391I, I393V, E399D, T403A, Y405S, A408T, N418H, P421H, V423L, K424R, Y427F, K431P, I434L, V435E, G436A, F440Y, T450S, K454R, Q464E, V466A, V467I, T470E, D471N, T477A, H483L, L484M, S489G, L491P, E492K, A508T, D511E, K512T, Q520K, K527T, V531I, A534S, Q547E, A554K L92T, K104A, S105H, V111M, G112Q, K126P, T131S, E138L, T139G, Y146F, M164T, I167L, P170Q, F171I, I178A, L193R, K201L, L210T, W212K, P225Y, F227V, L228E, K238G, S268A, E298Q, L310M, H315K, A327L, Q330V, G335Q, T338G, Q340T, Y342T, P345K, F346~, K347N, N348M, D364T, V365Y, K366Q, Q373A, I382C, P387P_D, F389C, Q394V, T397Q, A400H, W414I, F416A, L425Q, Q428T, E430V, E438P, E449T, R463Q, S468D, Q487T, G490P, V493M, Q507T, Q509A, E516P, S519E, E523Q, I526L, K530A, E546Q, K550H, K558Q 
CM2573 01CM2573 None None Y115F, F116Y, T215Q, K219E V108I, Y181V, Y188L, M230L A98S, K101S, L109V, V118I, D121Y, K122E, D123E, I132V, S134C, I135V, G141A, I142K, N147K, A158T, S162A, S163T, T165A, Q174D, P176Q, V179L, V189I, Q197E, T200R, I202V, E203K, E204R, L205V, Q207D, H208L, R211S, F214I, D218E, K223Q, E224D, D237G, T240R, V241I, Q242R, I244V, V245E, E248D, K249Q, D250E, S251T, D256E, A272S, V276T, Q278H, L282C, L283I, T286V, V292T, I293V, P294E, E300Q, L301A, E312Q, P313E, V317A, S322E, D324P, K331S, Q332L, Q334E, I341F, Y354F, R356K, M357V, G359T, T362I, T369A, V372L, I375A, T377R, I380L, K388R, K390R, L391V, I393V, E399D, T403A, Y405S, A408T, N418H, P421H, V423L, K424R, Y427F, K431P, I434L, V435E, G436A, F440Y, E449N, T450S, K454R, Q464E, V466A, V467I, T470E, D471N, T477A, H483L, L484M, S489G, L491P, E492K, D511E, K512T, Q520K, K527T, V531I, A534S, Q547E, A554K L92T, K104A, S105H, V111M, G112Q, K126P, T131S, E138L, T139G, Y146F, M164T, I167L, P170Q, F171I, I178A, L193R, K201L, L210T, W212K, P225Y, F227V, L228E, K238G, S268A, E298Q, L310M, H315K, A327L, Q330V, G335Q, T338G, Q340T, Y342T, P345K, F346~, K347N, N348M, D364T, V365Y, K366Q, Q373A, I382C, P387P_D, F389C, Q394V, T397Q, A400H, W414I, F416A, L425Q, Q428T, E430V, E438P, R463Q, S468D, Q487T, G490P, V493M, Q507T, Q509A, E516P, S519E, E523Q, I526L, K530A, E546Q, K550H, K558Q