<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Sagoe (2007)
Title Variability of the human immunodeficiency virus type 1 polymerase gene from treatment naive patients in Accra, Ghana.
Citation J Clin Virol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 25
NumPts 25
Subtype CRF02_AG, A, G

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
10 GHN10 None None   V35K, T39A, D123E, I142V, S162A, K173T, Q174K, D177E, T200A, Q207E, V245KQ, E248EDKN, D250DE, K281KR, T286A, E291D, V292I, I293V, P294T, K311KR, S322T, I326V  
103 GHN103 None None   V35T, E36ED, E40D, D123E, I135V, S162A, K173T, Q174R, D177E, T200A, Q207E, R211RK, V245KM, K281R, T286A, E291D, V292VI, I293V, P294T, S322T, I326V  
104 GHN104 None None   V35T, E36ED, T39TA, E53D, I135V, S162A, K173T, Q174EK, D177E, R199RK, T200A, Q207E, R211RK, P243H, V245E, A272P, L279M, T286A, A288T, E291ED, V292VI, I293V, P294PT, E297R, S322T, I326V  
105 GHN105 None None   K20KR, V35T, V60I, V90I, I135V, S162A, K173T, Q174K, D177E, I178IM, T200A, Q207AE, R211RKNS, F214FL, V245Q, K281KR, T286A, E291ED, V292I, I293V, P294T, H315HQ, S322T, I326V  
111 GHN111 None None   V35T, E36D, T39KQ, K43KE, V60I, K64KR, A98AS, D123E, I135V, S162A, Q174N, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292VI, I293V, P294T, L310I, S322T  
117 GHN117 None None   V35T, E36D, T39K, K43E, V60I, D121H, K122E, I135L, K173N, Q174QK, D177E, V179I, T200A, Q207A, R211RKT, V245L, K281R, T286A, E291D, V292I, I293V, P294T, E312D, I326V  
123 GHN123 None None   V35T, T39L, V60I, V90I, I135V, S162A, K173T, D177E, I178M, T200A, Q207D, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, S322A  
15 GHN15 None None   V35T, E36D, T39M, K122E, S162A, K173T, Q174K, D177E, I178IM, T200A, Q207E, V245E, E248EDHQ, A272P, T286A, K287KR, A288G, I293V, P294A, S322T  
21 GHN21 None None   V35T, E36A, T39K, K43E, K122E, D123GS, S162A, K173S, Q174K, D177E, V179I, Q207A, V245Q, E248DN, A272P, T286A, E291D, I293V, P294T, E312D, I326V  
24 GHN24 None None   V35T, E36D, V60VI, D123E, I135V, S162A, K173KT, Q174N, D177E, T200A, Q207E, R211K, V245KT, E248D, D250DE, S251SC, A272P, T286A, V292I, I293V, P294T, S322T E29ED, F61FL 
25 GHN25 None None   V35T, E36ED, K122KE, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211RK, V245Q, K281R, T286A, E291D, V292I, I293V, P294AITV, D324DE  
34 GHN34 None None   V35T, K49R, V60I, L109LI, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, P243PT, V245Q, E248EQ, D250DE, S251SN, T286A, E291D, V292I, I293V, P294T, S322T, I326V  
36 GHN36 None None   K32R, V35T, V60I, D123DE, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, E203ED, Q207A, R211EK, V245Q, E248D, K281R, L283I, T286A, E291D, V292VI, I293V, P294PT, S322A, I326IV  
60 GHN60 None None  V179E K20R, V35T, T39E, E40D, V60I, K104R, I135V, K173A, Q174K, D177E, T200A, Q207DE, R211K, F214L, L228H, V245Q, E248D, D250E, S251D, A272P, Q278H, K281R, T286A, E291D, V292I, I293V, E297A, L301M, D320E, I326IV, I329V  
67 GHN67 None None   K20R, V35T, E36D, T39E, I135V, S162A, K173E, Q174K, D177E, I178M, T200A, Q207E, P243T, V245Q, Y271F, T286A, E291D, V292I, I293V, P294T, L295M, S322T  
71 GHN71 None None   K20R, V35T, E36D, E40D, V60I, I135V, S162A, K173T, Q174E, D177E, I178M, T200A, E204K, Q207E, L228Q, P243T, V245Q, A272P, K277R, T286A, V292I, I293V, P294T, S322T  
72 GHN72 None None   E6D, V21I, V35T, E36D, K49KR, E53D, L109LI, K122P, I135V, S162A, M164ML, K173T, Q174E, D177E, I178L, T200A, K201KN, E204X, Q207D, V245K, E248D, D250E, K277R, T286A, E291D, V292I, I293V, P294T, D320DE, P321PS, S322T, I326V  
81 GHN81 None None   K20KR, K32R, V35T, T39M, V60I, D123DE, I135V, E138EA, S162A, K173T, Q174K, N175NY, D177EG, I178IM, T200AE, Q207AT, R211K, V245Q, T286A, E291D, V292VI, I293V, P294T, S322T, I326V  
82 GHN82 None None   V35T, T39M, K102R, I135V, S162A, K173A, Q174K, D177E, V189A, T200A, I202V, Q207E, P243T, V245Q, T286A, E291D, V292I, I293V, P294T, K311R, P321X, S322T D320KN 
86 GHN86 None None   V35T, E36D, K122KE, D123DN, I135V, S162A, K173R, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D, D250DE, V276I, L283I, T286A, E291D, V292I, I293V, P294T, I326V  
87 GHN87 None None   V21I, V35T, E36D, V60I, T69S, K122P, I135V, S162A, K173AT, Q174K, D177E, I178L, I180IV, G196E, T200A, Q207G, R211K, V245Q, E248D, A272S, T286A, E291D, I293V, K311KR, S322AT, I326V C280C* 
88 GHN88 None None   V35T, T39K, K43KQ, D123E, I135IV, S162A, T165I, K173AT, Q174K, D177E, G196E, T200A, Q207E, F214FL, V245E, S251H, T286A, E291D, V292I, I293V, P294T, S322T, I326V  
90 GHN90 None None   V35T, V60VI, K122E, S162T, T165I, K173KT, Q174K, D177E, I178IV, T200A, Q207E, R211K, V245Q, E248N, D250DE, T286A, E291D, V292I, I293V, P294T, S322T D121CHRY 
93 GHN93 None None   V21I, V35T, E36D, T39L, D123E, A158S, S162A, K173T, Q174KT, D177E, I178V, G196GE, Q207A, V245Q, E248N, K277R, K281R, T286A, E291D, I293V, P294T, E312D, I326V  
96 GHN96 None None   V35T, E36D, K102E, D123DE, I135V, S162A, K173KT, Q174GRS, D177E, I178M, T200A, Q207D, R211K, V245Q, A272P, K277R, T286A, E291ED, V292I, I293V, P294PT, V314I, S322A, I326V  

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