<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Sanchez (2006)
Title Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia.
Citation Am J Trop Med Hyg
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 37
NumPts 37
Subtype B, F

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
COL001 COL001 Unknown Unknown   V35T, E40D, K49R, V60I, T69S, I135V, S162C, E169D, K173T, Q174K, T200A, Q207K, R211Q, K238R, V245Q, E248D  
COL041 COL041 Unknown Unknown   R83K, D123E, I178L, V245L  
COL105 COL105 Unknown Unknown M184I E138K, G190R V35T, E44K, G45E, W88*, V111I, D123E, W153*, I178L, V179I, E194K, G196R, R211K, W212*, E224K, W229*, M230I, W239*, W252*, W266*, K277R, Q278H, R284K, E291K, I293V, G333R, Q334L, G335S, W337*, M357T, A376T, T377L, S379C, W383*, K390R, W398*, A400T, W401*, W402*, W406*, W410*, W414*, W426*, V435A, R448K, L452I, D460N, R461K, V467I, L491S, E492K, S519N, K527N, W535*, R557K, V559I M16I, G18S, E29K, M41I, G51R, R72Q, G93R, G99R, D110N, G112S, G141K, G152R, G155R, G213R, G231S, G262K, G273R, G285R, G316R, G352R, E413K, G436R, G444K, G453K, G456R, G462R, E478K, G490R, G504R, G541K, G543K, G544R, G555K 
COL116 COL116 Unknown Unknown   E6D, V35K, T39A, K102R, I142V, S162C, V179I, R211K, F214L, V245K  
COL1233 COL1233 Unknown Unknown   K102R, I135V, I142L, I178M, I202V, Q207A, R211K, V245K E53K 
COL1378 COL1378 Unknown Unknown   K20R, K104Q, I135T, G196R, T200A, I202V  
COL1497 COL1497 Unknown Unknown  K103N K20R, T107P, I135T, G196R, T200A, I202V K104H 
COL154 COL154 Unknown Unknown   E6D, V35R, K102R, K122KE, I135T, I195T, T200I, F214L, V245K  
COL205 COL205 Unknown Unknown   K20R, K122E, I135T, T200A, Q207A, R211K, F214L E53K 
COL211 COL211 Unknown Unknown   I135T, D177E, R211K, F214L  
COL220 COL220 Unknown Unknown   K20R, K49R, I135T, S162D, Q174K, G196E, V245E  
COL223 COL223 Unknown Unknown M184V  K122E, I135M, I178M, Q207QE  
COL239 COL239 Unknown Unknown   K49R, F171Y, R211K  
PCM001 PCM001 Unknown Unknown T215A  K122E, I142V, S162C, I202V, Q207E, R211K, V245I, A272P, I293V, T296S, E297A, I329L, T338S, A360T, E449D, L452S  
PCM003 PCM003 Unknown Unknown   D86E, D123E, I142V, S162A, D177E, Q207E, R211K  
PCM005 PCM005 Unknown Unknown   V60I, V106I, I180V, R211K, V245K  
PCM006 PCM006 Unknown Unknown   K49R, I50V, K103R, V118I, K122E, I135V, E169D, T200E, F214L, E248D  
PCM009 PCM009 Unknown Unknown   V60I, D123E, I142V, D177E, G196E  
PCM011 PCM011 Unknown Unknown   D123E, I178ILV, F214L, V245E  
PCM013 PCM013 Unknown Unknown   R83K, K102Q, D123E, I135T, S162C, I178L, R211G, A272P, L295I, E297K, D324E, G335D, G359S, T377M, K390R, E404D, V435L, D460N, R461K, Q480H, L503I  
PCM015 PCM015 Unknown Unknown   V35I, S48T, R83K, D123E, I135T, Q207E, R211K R72S 
PCM016 PCM016 Unknown Unknown   K20R, D123E, D177E, I178L, I244V, V245E  
PCM023 PCM023 Unknown Unknown   K102Q, K122E, R211K, A272P, K277R, Q334D, F346C, I375V, A400S, E404D, E432D, V435L, E514D, Q524E, K530R, A534S  
PCM025 PCM025 Unknown Unknown   E6D, V35I, V106I, V118I, D123E, I202V, R211K, F214L D86S 
PCM031 PCM031 Unknown Unknown   E28A, K32Q, V35T, K64R, D123E, I135T, S162C, I178L, Q207E, R211K, A288S, E297K, Q334Y, M357A, A400S, E449D, L452I, R463K, K527R, V548I, A554T, K558R  
PCM033 PCM033 Unknown Unknown  K103N K32N, V35L, I135R, I202V, R211K, V245K  
PCM034 PCM034 Unknown Unknown   V60I, Q207E, R211K, V245E, A272P, I293V, V317A, S322T, D324N, M357A, A400S, A446S, S468P, T470N, H483Y G51R 
PCM035 PCM035 Unknown Unknown   K122E, Q207A, R211K, V245L, E248D  
PCM037 PCM037 Unknown Unknown  K103T P14A, K102R, D177E, G196E, I202L, V245M  
PCM039 PCM039 Unknown Unknown   V35I, R83K, K122Q, I178L, G196E, R211K, A272S, K281R, E297S, Q334D, K350R, M357T, T377R, T397S, A400L, E404D, V435L, L452I, R461K, S519N, Q520L, A554S  
PCM074 PCM074 Unknown Unknown   V35E, A98S, I135R, D177E, Q207E, R211K, V245M, A272P, T286A, V292I, I326V, Q334P, M357T, V365I, A376S, K385R, A400S, W410*, E430X, A446S, L452I, K512T F61FV, W153W* 
PCM080 PCM080 Unknown Unknown   K11Q, V118I, K122E, D123N, I135T, E169D, D177E, I202V, R211K, F214L, I244V  
PCM083 PCM083 Unknown Unknown   K20R, K122E, S162C, R211G  
PCM172 PCM172 Unknown Unknown   I5IV, E6D, I195L, G196E  
PCM173 PCM173 Unknown Unknown   V35I, R83K, D123E, I135T, T200A  
PCM174 PCM174 Unknown Unknown   I50V, R83K, D123E, I135T, D177E, Q207E, R211K, V245E D185N 
PCM189 PCM189 Unknown Unknown   V35T, T39A, I135V, I142V, R211Q, E248D