<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Arroyo (2005)
Title HIV-1 diversity and prevalence differ between urban and rural areas in the Mbeya region of Tanzania.
Citation AIDS
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 14
NumPts 14
Subtype C, A

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CO178 CO178 None None   V35M, E36A, T39E, S48T, K122E, D123G, I135T, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, E291D, V292I, I293V, K311R, Q334H, G335D, R356K, G359T, T377M, K390R, E404D, V435A, R461K, V466I, V467I, D471E, H483Q, L491S, S519N, K530R, A534S, A554S  
CO3056 CO3056 None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, K281R, T286A, E291D, I293V, Q334N, G335D, R356K, G359T, K390R, A400T, E404D, V435A, G436E, L452K, V466I, T470M, D471E, T477A, H483Q, L491S, S519N, K527N, K530R, V531I, A534S, A554S  
CO328 CO328 None None   V35T, E36A, T39D, S48E, V60I, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K275R, Q278N, T286A, E291D, V292I, P294S, K311R, D324E, Q334D, G335D, R356K, G359T, V365I, K366R, T377M, T386I, K390R, A400T, E404D, A446S, L452I, V466I, D471E, H483Q, L491S, Q509H, L517I, S519N, K530R, A534S, A554S  
CO3305 CO3305 None None   K20R, V35T, E36A, T39E, S48T, V60I, K122E, D123S, I142L, K173T, Q174K, T200A, Q207A, R211K, P243H, V245Q, K277R, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T377Q, K390R, A400T, E404D, E413D, E449D, T450R, L452I, V466I, V467I, T470N, D471E, H483Q, L491P, S519N, K527N, K530R, A534S, A554S  
CO346 CO346 None None   E6D, V35T, V60I, K122E, D123S, K173A, I178M, G196E, T200A, E204K, Q207E, R211K, V245H, D250E, A272S, E291D, V292I, I293V, Q334N, G335D, R356K, T377M, K390R, A400T, E404D, V435I, A437V, L452I, L469I, D471E, H483Q, L491S, S519N, K530R, A534S, A554S V314T 
CO3710 CO3710 None None   V35T, T39K, S48T, K122E, D123G, K173A, Q174K, T200A, Q207E, R211K, V245N, A272P, T286A, V292I, I293V, P294A, E297K, Q334H, G335D, R356K, M357I, G359T, T377M, I380V, K390R, A400T, E404D, V435A, L452I, V466I, D471E, H483Q, L491S, S519N, K527N, K530R, A534S, A554S  
CO3720 CO3720 None None   V35T, T39A, V60I, K122E, D123N, I135T, I142T, K173S, Q174K, D177E, Q207A, R211S, V245M, E248D, D250E, S251I, T286A, I293V, P294T, E312D, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, T386S, A400T, T403M, E404D, E432D, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S  
CO6025 CO6025 None None   P4S, V35T, E36A, T39E, S48T, W88*, K122E, D123S, A158S, R172K, K173A, D177E, G196R, T200A, Q207E, W212*, M230I, V245Q, W252*, W266*, A272P, K275Q, L279M, R284K, T286A, E291D, V292I, I293V, R307K, Q334L, G335D, P345T, F346H, R356K, G359T, T377Q, K390R, E404D, E415X, F440Y, R461K, S468T, D471E, H483K, L491S, S519N, K530R, A534S, A554S M16I, G18R, G51R, G93R, G231R, G316K, G352R 
CO6130 CO6130 None None   V35T, T39K, S48T, V60I, K122E, D123S, E138A, T165I, Q174K, G196E, I202V, Q207E, R211K, F214L, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, M357R, R358K, G359S, K366R, T377I, K390R, A400T, E404D, V435A, A437V, D471E, H483Q, L491S, S519N, K527Q, K530R, A534S, A554N, K558R  
CO6721 CO6721 None None  Y188H V35T, T39E, S48T, K122E, D123N, K173I, Q174K, T200A, Q207E, R211K, V245C, A272P, I274V, K281R, T286A, E291D, V292I, I293V, P294T, D324G, Q334N, G335D, G359T, A371V, A376T, T377M, K390R, E396D, A400T, E404D, V435I, V466I, S468T, D471E, H483Q, L491S, S519N, K527N, K530R, A534S, A554S N137H, I167L 
CO6770 CO6770 None None   K22R, V35T, E36A, T39E, S48T, K122E, D123G, K173A, D177E, E194N, T200A, Q207E, V245Q, E248D, D250G, A272K, K277R, T286A, E291D, V292I, I293V, D324E, G335D, P345Q, F346H, R356K, G359T, T377Q, K390R, A400I, E404D, V435A, L452M, R461K, V466I, D471E, K476R, H483K, Q487E, L491S, L517I, S519N, K530R, A534S, A554S  
CO6968 CO6968 None None   V35A, K49R, V60I, K122E, D123N, I135T, K173S, Q174R, D177E, V179I, T200A, Q207A, R211S, V245I, A272S, K277R, T286A, E291D, I293V, E312D, V317A, Q334H, G335D, R356K, G359T, T377M, K390R, A400T, T403M, E404D, E432D, V435A, D471E, Q480H, L491S, S519N, Q524K, K527G, E529D, A534S, A554S  
CO883 CO883 None None M184I G190R V35T, E36A, T39D, S48T, K49R, W71*, W88*, K122E, D123N, I135T, T139A, A158S, E169K, K173T, D177E, E194K, G196R, T200A, Q207E, R211K, W212*, W229*, V245Q, K249Q, D250E, V261I, W266*, A272S, K277R, R284K, E291D, V292I, I293V, G333R, Q334H, G335D, R356K, G359N, T377I, W383*, T386I, K390R, W398*, A400T, W401*, W402*, E404D, W410*, W414*, W426*, V435A, R448K, K454R, R461K, V466I, D471E, H483Q, L491S, S519N, E529D, A534S, W535*, V548I, A554S M16I, G45R, G51R, G112E, G141E, G155R, G231R, G273E, G285R, G316K, E413K, G444R, G453R, G456E, E478K, G541R, G543R, G544R, G555R 
CO9 CO9 None None   V35T, V60I, K173A, Q174K, D177E, T200A, Q207E, V245Q, T286A, V292T, I293V, P294A, E312N, K323R, G335D, M357K, G359S, T369A, A371V, I375V, A376G, T377M, T386S, A400T, T403M, E404D, W410Y, E432D, D471E, Q480H, L491S, L503I, K512R, L517I, S519N, Q524K, K527G, E529D, A534S, A554S