<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Protease Inhibitors

Subtype F
Gene PR
Mutation L63S
Rx PI-naive
IncludeMixtures No
References 38
Patients 71
Isolates 71
 
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Sequences matching input query are shown below. Original reference, patient identifier, isolate name, partial treatment histories and accession number are indicated. Complete treatment histories, when available, can be accessed by clicking the isolate name. Sequences may additionally be downloaded in the fasta format, or viewed as individual or composite alignments using the options above. If the user wishes to view individual alignments of isolates for which there are multiple clones, the user can choose to view either an alignment of consensus sequences derived from the clones or an alignment of each clone as well as a consensus sequence.

Author (yr) Patient Isolate Acc# PIs WksPIMajorDRMs PIMinorDRMs OtherMutSubtype
Vergne (2000)95cm-mp25795cmmp257AJ249237None   L10V, I15V, K20R, E35D, M36I, R41K, I62V, L63S, H69Q, L89MF
Carr (2001)URTR17URTR17AY037272None   T12S, I15V, K20R, E35D, M36I, R41K, R57K, Q61N, L63S, I72TF
Kijak (2001)ARG15ARG15PRAF328575None   I15V, G16E, E35D, M36I, R41K, R57K, Q61N, L63SF
Brindeiro (2002)TVGG13TVGG13AY145824None   I15V, E35D, M36I, R41K, R57K, D60E, Q61N, I62V, L63S, L89MF
Eshleman (2004)ABB66ABB66AY444281None   L10V, I15V, E35D, M36I, P39S, R41K, I62V, L63S, H69Q, L89MF
 3781137811AY444273None   K14R, I15V, G17E, E35D, M36I, R57K, Q61N, I62V, L63S, L89MF
Gulick (2004)RG5RG5w0 None  V11VIL10I, I15V, E35D, M36I, R41K, R57K, Q61N, L63S, I72T, V77I, I93LF
Machado (2004)N35N35AY569871None   I15V, E35D, M36I, R41K, R57K, D60E, Q61N, I62V, L63S, I64L, L89MF
 N76N76AY569901None   T12M, E35D, M36I, R41K, R57K, Q61N, L63SF
 N47N47AY569882None   I15V, E35D, M36I, R41K, R57K, Q61N, I62V, L63S, I72T, T74SF
Machado (2004)cs122cs122AY313300None   T12R, L19I, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, L89M, C95SF
 cs156cs156AY313310None   L10V, I15V, E35D, M36I, R41K, R57K, D60E, Q61N, L63S, I72V, V77IF
 cs157cs157AY313311None   L10V, E35D, M36I, R41K, Q61N, L63S, E65D, V77I, L89MF
Non-B Workgroup (2005)BR36BR36AY900876None   Q2P, L10V, E35D, M36I, R41K, Q61N, L63S, V77I, L89MF
 BR1052BR1052AY900940None   L10V, I15V, E35D, M36I, R41K, K43R, R57K, Q61N, L63S, I72T, C95SF
 BR1060BR1060AY900948None   I15V, E35D, M36I, R41K, R57K, D60E, Q61N, I62V, L63S, I64LF
Rodrigues (2005)BLF_Pat7BR03SP270AY643172None   I15V, K20R, E35D, M36I, P39S, R41K, R57K, Q61N, L63S, H69Y, L89MF
de Sa Filho (2006)BREPM12817BREPM12817DQ085874None   L10I, I13V, G16E, L19P, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I72TF
Laurent (2006)CK2-7602CM-76AM279447None   L10I, I13V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, I62V, L63S, H69Q, L89MF
Pando (2006)02AR11545502AR115455DQ383747None   I15V, E35D, M36I, R41K, R57K, Q61N, L63S, H69Y, I72TF
Petroni (2006)AP_ARRP040AP_ARRP040DQ345496None   I15V, E35D, M36I, R41K, K45R, R57K, Q61N, L63S, V77I, I93LF
Santos (2006)F1021PRF1021PRDQ191031None   G17E, E35D, M36I, R41K, R57K, Q61N, I62V, L63S, H69Y, L89MF
Dilernia (2007)F023F023EF120085None   I15V, K20R, T31TA, E35D, M36I, R41K, R57K, Q61N, L63S, I64M, V75IF
 F136F136EF120143None   L10V, I13V, I15V, E35D, M36I, R41K, R57K, Q61N, L63S, I64V, E65D, K70EF
 F172F172EF120154None   T12S, E35D, M36I, N37D, R41K, K45R, R57K, Q61N, L63S, I93LF
 F196F196EF120167None   L10I, I15L, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I72T, I93LF
 F279F279EF120208None   T12N, I15V, E35D, M36I, R41K, R57K, D60E, Q61D, L63S, I72TF
 F331F331EF120236None   L10V, I15V, K20R, E35D, M36I, R41K, R57K, Q61D, L63S, I72T, I93LF
 N54N54EF120311None   T12A, I15V, E35D, M36I, R41K, R57K, Q61N, I62V, L63S, T74SF
 F003F003EF120340None   I15V, L19I, E35D, R41K, R57K, Q61N, L63S, I93LF
Rios (2007)CH122MR_CH122EF194024None  K43TT12K, I15V, L19I, E35D, M36I, R57K, Q61D, L63SF
Sa-Filho (2007)BREPM1029BREPM1029EF637052None   L10V, I15V, E35D, M36I, R41K, R57K, Q61N, L63SF
 BREPM1026BREPM1026EF637055None   L10V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, D60E, Q61N, I62V, L63S, E65D, V77I, L89M, I93LF
Lloyd (2008)CR07503HN_CR075EU312668None   L10I, K20R, E35D, M36I, R41K, I62V, L63S, H69Q, K70R, A71AV, I72IT, L89MF
Palacios (2008)1257912579 None   G16E, K20KM, E35D, M36I, R41K, R57K, Q61N, L63S, I64L, H69Y, I72T, L89LMF
Yamaguchi (2008)J11233J11233EU697906None   T12S, I13V, L19I, K20I, M36I, N37S, R41K, L63S, I64M, C67E, H69K, K70R, V82I, L89MF
Cardoso (2009)BRGO3001BRGO3001FJ548786None   E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I72T, L89MF
 BRGO3015BRGO3015FJ548798None   I15V, E35D, M36I, R41K, R57K, Q61N, L63S, I72TF
 BRGO3076BRGO3076FJ594144None   I15V, G17D, K20R, E35D, M36I, R41K, R57K, Q61N, L63SF
Cuevas (2009)X2632_1X2632_1GU326158None   L10V, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, L89MF
Vercauteren (2009)pt8358144231798GQ400189None   I15V, G17E, L19I, R57K, Q61N, L63S, E65D, I93LF
Ferreira (2010)P31DIP31GQ862307None   L10I, I13V, E35D, M36I, P39Q, R41K, R57K, Q61N, L63S, K70R, T80Q, L89MF
 P49DIP49GQ862308None   L10V, I15V, E35D, M36I, R41K, R57K, Q61N, L63S, V77I, L89MF
Yebra (2010)40134007SP401340FJ481662None   L10I, E35D, M36I, R41K, R57K, Q61N, L63S, C67S, H69Q, V77VIF
 18836004SP0188360FJ481673None   G17E, K20R, E35D, M36I, R41K, R57K, Q61N, L63S, I93LF
 25609105SP0256091FJ481675None   G17D, E35D, M36I, R41K, R57K, Q61N, L63S, E65DF
 22413304SP0224133FJ481676None   I15IV, G17D, E35D, M36I, R41K, R57K, Q61N, L63S, E65DF
 33780506SP337805FJ481681None   L10LI, I15V, G17D, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I93LF
Aulicino (2011)598-C131598-C131HQ158217None   I15V, E35D, M36I, R41K, R57K, Q61N, L63S, I93LF
Carvalho (2011)O07-83O07-83GU214088None   K14R, I15V, E35D, M36I, R41K, K45R, R57K, L63S, I64VF
Ferreira (2011)BRMT2526BRMT2526HQ638704None   L10I, Q18L, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I72T, L89M, I93LF
 BRMT2558BRMT2558HQ638710None   I15IV, E35D, M36I, R41K, R57K, Q61D, L63S, E65D, L89MF
 BRMT722BRMT722HQ638765None   L10V, Q18L, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I72T, L89MF
Florea (2011)4294_20074294_2007JQ083058None   T12P, K14R, I15V, E35D, M36I, R41K, R57K, L63S, L89MF
Santos (2011)J76J76_PR_RTJN010454None   G17E, K20R, M36I, R41K, R57K, Q61N, L63S, H69Y, L89MF
 J193J193_PRJN010597None   T12E, K14R, E35D, M36I, R41K, R57K, Q61N, L63S, I64L, I72T, L89M, I93LF
Caron (2012)Gab082183Gab082183HQ541936None   L10V, T12N, I15V, K20R, E35D, M36I, R41K, I62V, L63S, L89M, I93LF
da Silveira (2012)BRMS48BRMS48JF342299None   L10V, E35D, M36I, R41K, R57K, Q61N, L63S, I72ITF
Alencar (2013)MG2-0010MG2-0010JQ237983None   I13V, I15V, E35D, M36I, P39Q, R41K, K45R, R57K, Q61N, L63S, I64LF
 RJ2-0046RJ2-0046JQ238061None   L10I, T12E, I15V, E35DN, M36I, R41K, Q61N, L63S, C67E, K70R, I72T, L89MF
 RJ2-0055RJ2-0055JQ238105None   K14R, I15V, L19I, E35D, M36I, N37E, R41K, R57K, D60E, Q61N, L63S, E65DF
 PE2-0086PE2-0086JQ238175None   L10I, I15V, K20R, E35D, M36I, R41K, R57K, Q61N, I62V, L63S, L89M, I93LF
Ferreira (2013)BR09SP357BR09SP357HM534183None   I15V, K20R, E35D, M36I, N37D, R41K, R57K, Q61N, L63S, I72T, I93LF
Frentz (2013)EHR-61454EHR-61454JX300566None   L10V, K14R, E35D, M36I, R41K, K43R, R57K, Q61N, L63S, H69Q, V77I, L89MF
 EHR-72094EHR-72094JX300761None   T12P, K14R, I15V, E35D, M36I, R41K, R57K, L63S, L89MF
Temereanca (2013)SR51SR51JX966524None   L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89MF
 SR53SR53JX966525None   L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89MF
 SR61SR61JX966528None   L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89MF
 SR63SR63JX966529None   L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89MF
 SR64SR64JX966530None   L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89MF
Van Zyl (2013)6151588KC423250None   E35D, M36I, R41K, L63S, H69K, V82I, L89M, I93LF