| Author (yr) |
Patient |
Isolate |
Acc# |
PIs |
Wks | PIMajorDRMs |
PIMinorDRMs |
OtherMut | Subtype |
| Tanuri (1999) | BR112 | BR112 | AF079996 | None | | | | Q7H, L10V, K14R, I15V, E34G, E35D, M36I, P39S, R41K, R57K, Q61N, L89M | F |
| Op de Coul (2000) | CE93R26 | CE93R26 | AF204042 | None | | | | L10V, T12S, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | CE96R96 | CE96R96 | AF204043 | None | | | | L10V, T12P, I15V, G16E, K20R, E35D, M36I, N37D, R41K, R57K, L63T, E65D, I72T, L89M | F |
| | CE97R98 | CE97R98 | AF204047 | None | | | | L10V, T12K, I15V, K20R, E35D, M36I, R41K, R57K, Q58X, L63T, E65D, L89M | F |
| | CE97R99 | CE97R99 | AF204049 | None | | | | L10V, I15V, K20R, E35D, M36I, N37D, R41K, K45R, R57K, L63T, E65D, I72T, L89M, I93L | F |
| | CE97R104 | CE97R104 | AF204052 | None | | | | L10V, T12R, I15V, G16E, L19I, K20R, E35D, M36I, P39S, R41K, R57K, I62V, L63T, E65D, L89M | F |
| | CE97R105 | CE97R105 | AF204046 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, H69Y, L89M | F |
| Op de Coul (2000) | EO-CA20 | CA20 | AF247521 | None | | | | L10V, T12A, I13V, K20R, E35D, M36I, R41K, D60E, I62V, L63P, H69Q | F |
| | EO-CA16 | CA16 | AF247520 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, L89M | F |
| Triques (2000) | 95cm-mp257 | 95cmmp257 | AJ249237 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, I62V, L63S, H69Q, L89M | F |
| Vergne (2000) | LVMP1443 | LVMP1443 | AJ287042 | None | | | | L10V, I13V, K14T, I15V, L19Q, K20R, E35D, M36I, R57K, L63V, L89M | F |
| Balotta (2001) | CB-1292 | CB-1292 | AF295282 | None | | | | L10V, K14R, I15V, E35D, R41K, R57K, Q61N, L63C | F |
| Carr (2001) | ARMA036 | ARMA036 | AY037275 | None | | | | L10V, I15V, G17E, E35D, M36I, R41K, R57K, D60E, Q61N, L63T, E65D, I72T | F |
| | URTR23 | URTR23 | AF385934 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, Q61N | F |
| Kijak (2001) | ARG13 | ARG13PR | AF328573 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, Q61N, I93L | F |
| Brindeiro (2002) | TVGG17 | TVGG17 | AY145825 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, D60E, Q61N, E65D, I72T, L89M | F |
| Fonjungo (2002) | CM223 | CM223 | AY051202 | None | | | | L10V, I15V, L19I, K20R, E35D, M36I, R41K, R57K, V77I, L89M, I93L | F |
| | CM214 | CM214 | AY051201 | None | | | | L10V, I15V, G16E, K20R, M36I, R41K, I62V, L63H, H69Q, K70E, L89M, I93L | F |
| | CM1 | CM1 | AY051199 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, K45R, R57K, L63T, H69Q, I72V, V82I, L89M, I93L | F |
| Tebit (2002) | 99CMLB33 | 99CMLB33 | AF355313 | None | | | | P9T, L10V, I15V, G16E, K20R, E35D, M36I, P39T, R41K, I62V, L63H, H69Q, L89M | F |
| Brindeiro (2003) | BRC1528 | BRC1528 | AY213523 | None | | | | L10V, T12I, I13V, G16E, K20R, E35D, M36I, P39Q, R41K, R57K, D60E, Q61D, I72T, L89M | F |
| Soares (2003) | BRBS532 | BRBS532 | AF527190 | None | | | | L10V, K14R, I15V, E35D, M36I, R41K, R57K, Q61S, H69Y, L89M, C95S | F |
| | BRRJ866 | BRRJ866 | AF527354 | None | | | | L10V, K14R, I15V, E35D, M36I, R41K, R57K, D60E, Q61D, I72T, I93L | F |
| Eshleman (2004) | BrRJ127 | BrRJ127 | AY444303 | None | | | | L10V, I15V, E35D, M36I, R41K | F |
| | ABB66 | ABB66 | AY444281 | None | | | | L10V, I15V, E35D, M36I, P39S, R41K, I62V, L63S, H69Q, L89M | F |
| Espinosa (2004) | 50 | 50 | AY140144 | None | | | | L10V, T12A, K14R, I15V, G16E, E35D, M36I, R41K, R57K, Q61N, L63C, I72T | F |
| Gulick (2004) | RG21 | RG21w0 | | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63T, E65D, V77I, L89M | F |
| Kijak (2004) | 0016BBY | 02CM.0016 | AY371158 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, I62V, L63P, H69Q, L89M | F |
| Konings (2004) | KF_Pat10 | 00CM2389 | AY359692 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, I62V, H69Q, L89M | F |
| | KF_Pat11 | 01CM5887 | AY359693 | None | | | | L10V, I15V, K20R, E35D, M36I, P39Q, R41K, K45R, L63P, H69Q, I72V, L89M | F |
| Machado (2004) | N36 | N36 | AY569872 | None | | | | L10V, K14R, I15V, G16E, E35D, M36I, R41K, R57K, Q61N, E65D, I72T, L89M | F |
| Machado (2004) | cs156 | cs156 | AY313310 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, D60E, Q61N, L63S, I72V, V77I | F |
| | cs157 | cs157 | AY313311 | None | | | | L10V, E35D, M36I, R41K, Q61N, L63S, E65D, V77I, L89M | F |
| Sierra (2004) | CH12 | CH12 | AY536235 | None | | | | L10V, T12Q, I15V, E35D, M36I, N37E, R41K, R57K, D60E, Q61D | F |
| Holguin (2005) | 00071103 | 02_71103 | AY248334 | None | | | | L10V, T12P, K14R, E35D, M36I, R41K, R57K, L63V, T74S, L89M | F |
| Non-B Workgroup (2005) | BR36 | BR36 | AY900876 | None | | | | Q2P, L10V, E35D, M36I, R41K, Q61N, L63S, V77I, L89M | F |
| | BR1052 | BR1052 | AY900940 | None | | | | L10V, I15V, E35D, M36I, R41K, K43R, R57K, Q61N, L63S, I72T, C95S | F |
| Rodrigues (2005) | BR013 | 80397 | AY643203 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, Q61N, E65D, I72T, L89M | F |
| | BLF_Pat26 | BR03SP138 | AY643161 | None | | | | L10V, E35D, M36I, R41K, R57K, Q61N, L63P, E65D, K70R, I72V, L89M | F |
| | BLF_Pat36 | BR02SP117 | AY643135 | None | | | | L10V, T12I, I15V, G16E, E35D, M36I, P39PQ, R41K, R57K, D60E, Q61N, L63C, I72T, L89M | F |
| Babic (2006) | DB_SI8421-02 | SI8421-02 | AJ971100 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, P39Q, R41K, K45R, R57K, L63T, E65D, L89M | F |
| Marechal (2006) | JF_002 | JF_002 | DQ443624 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, D60DE, Q61QE, I62IV, I64IM, H69Q, I72V, V82VI, L89M, I93IL | F |
| Ndongmo (2006) | CM72 | CBN_CM72 | DQ394167 | None | | | | L10V, I13V, I15V, K20R, M36I, N37D, I62V, L63P, I72T, L89M, I93L | F |
| Pando (2006) | 04AR160677 | 04AR160677 | DQ383754 | None | | | | L10V, T12I, I15V, E35D, M36I, L89M | F |
| Petroni (2006) | AP_ARRP059 | AP_ARRP059 | DQ345505 | None | | | | L10V, T12E, I13L, I15V, L19LV, E35D, M36I, R41K, R57K, D60E, Q61D, I93L | F |
| Vergne (2006) | LV_01CM-VP_OU_52 | 01CM-OU_52 | AM181794 | None | | | | L10V, T12N, I15V, K20R, E35D, M36I, R41K, I62G, L63Q, H69Q, V82I, L89M | F |
| Vessiere (2006) | AV_M4339N | AV_M4339N | DQ297266 | None | | | | L10V, I13V, I15V, K20R, E35D, M36I, R41K, I62V, L89M | F |
| Dilernia (2007) | F006 | F006 | EF120077 | None | | | | L10V, K14KR, I15V, M36I, R41K, K43R, Q61N, L63P, I72V, Q92T | F |
| | F021 | F021 | EF120083 | None | | | | L10V, I15IV, E35D, M36IT, R41K, R57K, D60E, Q61D, L63LF, A71AT, I93L | F |
| | F040 | F040 | EF120101 | None | | | | L10V, I13IV, G16E, K20R, M36I, R57K, Q61N, I72T | F |
| | F136 | F136 | EF120143 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, R57K, Q61N, L63S, I64V, E65D, K70E | F |
| | F189 | F189 | EF120164 | None | | | | L10V, T12N, I15V, E35D, M36I, N37D, P39Q, R41K, K45R, R57K, D60E, Q61D, L63P, K70M, I72R, I93L | F |
| | F240 | F240 | EF120193 | None | | | | L10V, T12N, K14R, I15V, K20R, E35D, M36I, N37D, R41K, R57K, Q61N, E65D, I72T, L89M | F |
| | F304 | F304 | EF120220 | None | | | | L10V, T12I, I15V, K20R, E35D, M36I, R41K, R57K, Q61N, G68E | F |
| | F331 | F331 | EF120236 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, Q61D, L63S, I72T, I93L | F |
| | N14 | N14 | EF120275 | None | | | | L10V, I15V, E35D, M36I, N37D, R41K, R57K, D60E, I64V, I93L | F |
| | N18 | N18 | EF120279 | None | | | | L10V, I15V, E35D, M36I, N37D, R41K, R57K, D60E, I64V, I93L | F |
| | N41 | N41 | EF120300 | None | | | | L10V, E35D, M36I, R41K, R57K, Q61N, V77I, I93L | F |
| Eyer-Silva (2007) | BRSAP09 | 05BRSAP09 | DQ899706 | None | | | | L10V, T12H, M36I, N37E, R57K, Q61N, L63T, E65D, I72MV | F |
| | BRSAP09_PED | 05BRSAP09P | DQ899707 | None | | | | L10V, K20R, M36I, N37E, R57K, Q61N, L63A, I72M | F |
| | BRSQ89 | 06BRSQ89 | EF042685 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, D60E, I62V, L63V, H69K, I72K | F |
| Paraschiv (2007) | 157 | 157_2003 | JQ082989 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T | F |
| | 158 | 158_2003 | JQ082990 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R41K, K43KR, R57K, L63T, E65D, I72T, L89M | F |
| | 2093 | 2093_2004 | JQ082991 | None | | | | L10V, I13IV, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89LM | F |
| | 2301 | 2301_2004 | JQ082994 | None | | | | L10V, T12S, I15V, L19V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, V77I, L89M | F |
| | 2303 | 2303_2004 | JQ082995 | None | | | | L10V, I13IV, K14R, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | 2307 | 2307_2004 | JQ082996 | None | | | | L10V, K14R, I15V, K20R, E35D, M36I, N37A, R41K, R57K, L63T, E65D, L89M | F |
| | 304 | 304_2004 | JQ082997 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, I62V, L63T, E65D, I72T, L89M, I93L | F |
| | 397 | 397_2003 | JQ083001 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, I72T | F |
| | 4420 | 4420_2004 | JQ083002 | None | | | | L10V, T12N, K14R, I15V, K20R, E35D, M36I, N37D, R41K, K45KR, R57K, L63T, E65D, I72T | F |
| | 4505 | 4505_2004 | JQ083003 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72IV, L89M | F |
| | 632 | 632_2004 | JQ083008 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89M, I93L | F |
| | 634 | 634_2004 | JQ083009 | None | | | | L10V, I15V, G17E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72V, L89M | F |
| | 842 | 842_2004 | JQ083011 | None | | | | L10V, T12I, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, I62V, L63T, E65D, I72T, T74S, L89M | F |
| Rios (2007) | CH12 | MR_CH12 | EF193896 | None | | | | L10V, T12Q, I15V, E35D, M36I, N37E, R41K, R57K, Q61D | F |
| | CH106 | MR_CH106 | EF194007 | None | | | | L10V, T12Q, I15V, E35D, M36I, N37D, R41K, R57K, D60E, Q61D | F |
| | CH110 | MR_CH110 | EF194012 | None | | | | L10V, I15V, E35D, M36I, R41K, K43R, R57K, Q61N, L63P, L89M, I93L | F |
| Sa-Filho (2007) | BREPM1029 | BREPM1029 | EF637052 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, Q61N, L63S | F |
| | BREPM1026 | BREPM1026 | EF637055 | None | | | | L10V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, D60E, Q61N, I62V, L63S, E65D, V77I, L89M, I93L | F |
| Ferreira (2008) | 623 | BR06PR623 | EU340743 | None | | | | L10V, I15V, K20T, E35D, M36I, R41K, R57K, D60E, Q61N, L63P, I72E, I93L | F |
| Holguin (2008) | SP30-00070993 | SP30-00070993 | EU342756 | None | | | | L10V, K14R, I15V, E35D, M36I, R41K, R57K, Q61D, L63IS, I93L | F |
| Ndembi (2008) | CMYD-64 | 04CMYD-64 | DQ990428 | None | | | | L10V, I15V, K20R, M36I, R41K, I62V, L63A, I72T, L89M | F |
| | CMYD-71 | 04CMYD-71 | DQ990434 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, D60E, I62V, H69Q, L89M | F |
| Aghokeng (2009) | CYN418 | CYN418 | GU191589 | None | | | | L10V, I13IV, I15IV, K20R, E35D, M36I, R41K, I62V, L63C, L89M | F |
| | CDL85 | CDL85 | GU191615 | None | | | | L10V, T12S, I15V, K20R, E35D, M36I, R41K, R57K, L63T, L89M | F |
| Bartolo (2009) | CSE126 | 01AOCSE126 | EU068208 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, H69Q, L89M | F |
| | CSE128 | 01AOCSE128 | EU068210 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, H69Y, I72T, L89M | F |
| | HAB86 | 01AOHAB86 | EU068219 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, H69S, L89M | F |
| | HDC228 | 01AOHDC228 | EU068221 | None | | | | L10V, T12I, I13V, I15V, G16E, K20R, E35D, M36I, R41K, L63T, E65D, I72T, L89M | F |
| | HSL20 | 01AOHSL20 | EU068260 | None | | | | L10V, I13V, K14Q, I15V, G16E, E35D, M36I, N37I, R41K, R57K, L63T, E65D, I72T, L89M | F |
| | LFA13 | 01AOLFA13 | EU068263 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | SNS104 | 01AOSNS104 | EU068286 | None | | | | L10V, T12S, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | SNS48 | 01AOSNS48 | EU068303 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, I72T, L89M | F |
| | HM186 | 01AOHM186 | EU068325 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, L89M, I93L | F |
| | HM187 | 01AOHM187 | EU068326 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, H69Y, I72T, L89M | F |
| Cardoso (2009) | BRGO3010 | BRGO3010 | FJ548794 | None | | | | L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, V77I, L89M | F |
| Cuevas (2009) | X2632_1 | X2632_1 | GU326158 | None | | | | L10V, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, L89M | F |
| | X2687_1 | X2687_1 | GU326171 | None | | | | L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M | F |
| Cuevas (2009) | P1273 | P1273.1 | EU822620 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, R57K, D60E, Q61D, V77I, L89M | F |
| | P1467 | P1467.1 | EU822665 | None | | | | L10V, G17E, K20R, E35N, M36I, N37D, R41K, R57K, Q61N, L63I, H69Y, I72T | F |
| | P1599 | P1599.1 | EU822710 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, R57K, L63T, E65D, I72T, L89M | F |
| de Sa-Filho (2009) | 57367 | 57367Ith | GQ294625 | None | | | I47L | L10V, I13V, I15V, E35A, M36I, R41K, R57K, Q61N, V77I, L89M | F |
| Dumans (2009) | 34_05 | 34_05 | FJ405057 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, R57K, D60E, Q61D, L63P, I72T | F |
| | 470_05 | 470_05 | FJ405141 | None | | | L89V | L10V, I13V, G17D, K20R, E35D, M36I, R41K, R57K, Q61N, E65D, I72T | F |
| | 560_05 | 560_05 | FJ405142 | None | | | | L10V, T12I, I13V, G17D, K20R, E35D, M36I, R41K, R57K, Q61N, E65D, I72T, L89M | F |
| | 307_03 | 307_03 | FJ405157 | None | | | | L10V, E35D, M36I, R41K, Q61N, L89M | F |
| | 46_05 | 46_05 | FJ405163 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, Q61N, E65D, H69Q, L89M | F |
| Koyalta (2009) | 28 | TCHAD-28 | FJ688182 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63A, T74S, L89M | F |
| | 75 | TCHAD-75 | FJ688205 | None | | | | L10V, K14I, I15V, L19Q, K20R, E35D, M36I, R57K, L63V, L89M | F |
| Mintsa-Ndong (2009) | MKK24 | MKK24 | AM903431 | None | | | | L10V, I13V, K14IT, I15V, G16GE, L19Q, K20R, E35D, M36I, R57K, L63V, L89M | F |
| Vercauteren (2009) | pt2092 | 762946957 | GQ398932 | None | | | | L10V, I13IV, K14Q, I15V, K20R, E35D, M36I, R41K, R57K, Q61N, E65H, H69Q, L89M | F |
| | pt1983 | 1407969847 | GQ399041 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, I62V, L63I, L89IM | F |
| | pt1948 | 1571549513 | GQ399076 | None | | | | L10V, T12H, I15V, G16GE, E35D, M36I, N37ND, R41K, K43R, R57K, Q61N, L63Q, E65D | F |
| | pt1869 | 2059370379 | GQ399155 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, R57K, L63T, E65D, I72T, L89M | F |
| | pt1707 | 3124705134 | GQ399317 | None | | | | L10V, T12E, K14R, I15V, L19LI, K20R, E35D, M36I, R41K, I62V, L63H, H69Q, L89M | F |
| | pt1322 | 5268793849 | GQ399702 | None | | | | L10V, T12H, I15V, E35D, M36I, R41K, K43R, R57K, Q61N, L63Q, E65D | F |
| | pt1171 | 6161314874 | GQ399853 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, Q61N, L63C, V77I | F |
| | pt795 | 8392755973 | GQ400229 | None | | | | L10V, T12TI, I13V, K14KR, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | pt752 | 8640409048 | GQ400272 | None | | | | L10V, T12K, I15V, K20R, E35D, M36I, N37D, R41K, K43R, I62V, L63P, H69HQ, T74A, L89M | F |
| | pt665 | 9017941016 | GQ400359 | None | | | | L10V, I13V, I15V, G16GE, Q18QE, E35D, M36MI, R41K, R57K, Q61N, L63C, I72V, V77I, L89M | F |
| Bonura (2010) | 1234_133 | 1234_133 | GU969567 | None | | | | L10V, T12S, I15V, Q18E, L19I, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72IV, L89LM | F |
| Castelbranco (2010) | 090012A | 090012A | HM357730 | None | | | | L10V, I13V, I15V, G16E, L19LS, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | 090016A | 090016A | HM357733 | None | | | | L10V, I13V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | 090020A | 090020A | HM357734 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R41K, R57K, I62V, L63T, E65D, H69Y, L89M | F |
| | 090025A | 090025A | HM357735 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | 090026A | 090026A | HM357745 | None | | | | L10V, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, V77I, L89M | F |
| | 090028A | 090028A | HM357746 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, I72T, V77I, L89M | F |
| | 090044A | 090044A | HM357751 | None | | | | T4S, L10V, T12TI, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89M | F |
| | 090024A | 090024A | HM357756 | None | | | | L10V, T12AV, I13V, I15V, G16E, E34ED, E35D, M36I, P39PS, R41K, R57K, I62V, L63T, E65D, I72V, L89M | F |
| Castro (2010) | PHI-2 | PHI-2 | GQ131597 | None | | | | L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M | F |
| | PHI-22 | PHI-22 | GQ131610 | None | | | | L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, V77I, L89M | F |
| | PHI-3 | PHI-3 | GQ131598 | None | | | | L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M | F |
| Diop-Ndiaye (2010) | 923hald | 923hald | FN599757 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72V, L89M | F |
| Djoko (2010) | 618 | CD3355 | FR666618 | None | | | | L10V, T12S, I15V, G16E, K20R, E35D, M36I, P39S, R41K, K43R, L63T, H69K, L89M | F |
| Ferreira (2010) | P49 | DIP49 | GQ862308 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, Q61N, L63S, V77I, L89M | F |
| | p013 | Dip013 | GQ862323 | None | | | | L10V, I15V, E35D, M36I, R41K, L63T, I64V, E65D | F |
| | p022 | Dip022 | GQ862327 | None | | | | L10V, T12K, I15V, L19I, E35D, M36I, P39T, R41K, R57K, D60E, Q61D, L63I, L89M | F |
| Moussa (2010) | 13 | 40-0837F7 | HM117937 | None | | | | L10V, I13IV, I15V, G16A, K20R, E35D, M36I, N37D, K45R, R57K, D60E, Q61N, L63I, C67E, H69K, K70R, I72E, V82I, L89M | F |
| Yang (2010) | 2010693458 | 2010693458 | JQ616895 | None | | | | L10V, I13V, I15IV, G16E, E35D, M36I, R41K, R57K, L63T, E65D, L89M | F |
| | 2010693479 | 2010693479 | JQ616904 | None | | | | L10V, I13V, I15IV, G16E, E35D, M36I, R41K, L63T, E65D, I66V, I72T, V77I, L89M | F |
| Yebra (2010) | 401397 | 07SP401397 | FJ481661 | None | | | | L10V, I15V, L19LI, K20R, E35D, M36I, R41K, R57K, I62IV, L63T, E65D, I72IV, L89LM | F |
| Aghokeng (2011) | HJ1783 | HJ1783 | JN639526 | None | | | | L10V, T12TA, I15IV, L19LI, K20R, E35D, M36I, R41K, R57RK, L63P, H69Q | F |
| | SK1009-PI | SK1009-PI | HQ864358 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, K45R, D60E, I62V, L63P, H69Q, V82I, L89M | F |
| | SK1017-PI | SK1017-PI | HQ864359 | None | | | | L10V, I13V, I15V, K20R, E35D, M36I, R41K, R57K, D60E, I62V, I64IV, H69Q, L89LM | F |
| | SK3035-PI | SK3035-PI | HQ864360 | None | | | | L10V, K14KR, I15V, K20R, E35D, M36I, R41K, R57K, L63LP, H69Q, I72V, L89M | F |
| | SK6035-PI | SK6035-PI | HQ864362 | None | | | | T4S, L10V, K14R, I15V, K20R, E35D, M36I, R41K, H69HQ, L89M | F |
| | SK8010-PI | SK8010-PI | HQ864363 | None | | | | L10V, I13IV, I15V, K20R, E35D, M36I, R41K, K45KR, I62V, H69Q, L89M | F |
| | SK9032-PI | SK9032-PI | HQ864364 | None | | | | L10V, K14T, I15V, L19Q, K20R, E35D, M36I, R41K, Q61H, H69Q, L89M | F |
| Aulicino (2011) | 3428-M519TGY | 3428-M519TGY | HQ158153 | None | | | | L10V, I15V, L19I, E35D, M36I, R41K, R57K, Q61D | F |
| | 189-930 | 189-930 | HQ158201 | None | | | | L10V, T12I, I15V, E35D, M36I, R41K, R57K, Q61N | F |
| | 374-A494 | 374-A494 | HQ158205 | None | | | | L10V, K14R, I15V, Q18L, E35D, M36I, R41K, R57K, Q61N | F |
| | 329-B789 | 329-B789 | HQ158214 | None | | | | L10V, T12A, K14R, I15V, E35D, M36I, R41K, R57K, Q61N, I93L | F |
| | 186-C128 | 186-C128 | HQ158216 | None | | | | L10V, T12I, I13V, G16E, E35D, M36I, R41K, R57K, Q61N, I72T | F |
| | 151-E230 | 151-E230 | HQ158218 | None | | | | L10V, I15V, E35D, M36I, R41K, K55R, R57K, Q61N, G68E | F |
| | 246-171 | 246-171 | HQ158244 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, Q61N | F |
| Ferreira (2011) | BRMT3095 | BRMT3095 | HQ638744 | None | | | | L10V, G17E, E35D, M36I, N37K, R41K, R57K, Q61N, I72IT, L89M | F |
| | BRMT323 | BRMT323 | HQ638751 | None | | | | L10V, I13V, I15V, G16E, K20M, E35D, M36I, R41K, R57K, Q61N, E65D, I72T, L89M | F |
| | BRMT722 | BRMT722 | HQ638765 | None | | | | L10V, Q18L, E35D, M36I, R41K, R57K, Q61N, L63S, E65D, I72T, L89M | F |
| Florea (2011) | 102_2008 | 102_2008 | JQ083014 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, T74S, L89M | F |
| | 1044_2007 | 1044_2007 | JQ083015 | None | | | | L10V, I13V, K14KR, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72V, L89M | F |
| | 1102_2007 | 1102_2007 | JQ083020 | None | | | | L10V, T12N, I15V, G16GE, K20R, E35D, M36I, R41K, R57K, I62V, L63T, E65D, L89M | F |
| | 112_2008 | 112_2008 | JQ083025 | None | | | | L10V, T12S, I15V, L19Q, K20R, E35D, M36I, R41K, R57K, I62V, L63T, E65D, H69Y, L89M | F |
| | 1650_2007 | 1650_2007 | JQ083032 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, Q61H, L63T, E65D, I72T, L89M | F |
| | 1682_2007 | 1682_2007 | JQ083035 | None | | | | L10V, K14KR, I15V, L19I, E35D, M36I, R41K, R57K, I62V, L63T, E65D, T74S, L89M | F |
| | 208_2008 | 208_2008 | JQ083041 | None | | | | L10V, T12N, I15V, L19I, E35D, M36I, R41K, R57K, L63T, E65D, T74S, L89M | F |
| | 2368_2007 | 2368_2007 | JQ083044 | None | | | | L10V, I15IV, K20KR, E35D, M36I, R41K, R57K, I62V, L63T, E65D, L89M | F |
| | 2739_2007 | 2739_2007 | JQ083046 | None | | | | L10V, I13IV, K14KR, I15V, G16E, K20R, E35D, M36I, N37A, R41K, R57K, L63T, E65D, I72T, L89M | F |
| | 2903_2007 | 2903_2007 | JQ083047 | None | | | | L10V, I13V, K14KR, I15V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, E65D, I72IT, L89M | F |
| | 3163_2007 | 3163_2007 | JQ083052 | None | | | | P9T, L10V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63T, E65D, I72T, L89M | F |
| | 4639_2007 | 4639_2007 | JQ083063 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T | F |
| | 4645_2007 | 4645_2007 | JQ083067 | None | | | | L10V, K14R, G17E, E35D, M36I, R41K, R57K, L63T, E65D, I72AT, L89M | F |
| | 4650_2007 | 4650_2007 | JQ083070 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, L63T, E65D, I72V, T74S, L89M | F |
| | 4700_2007 | 4700_2007 | JQ083071 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, P39S, R41K, R57K, L63T, E65D, I72T, L89M, L97F | F |
| Fokam (2011) | CIRCB-9470 | CIRCB-9470 | JQ796125 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, K45R, H69Q, I72V, L89M | F |
| | CIRCB-11539 | CIRCB-11539 | JQ796136 | None | | | | L10V, I15IV, K20R, E35D, M36I, N37NS, P39T, R41K, D60E, I62V, L63P, H69Q, G94V | F |
| | CIRCB-11096 | CIRCB-11096 | JQ796179 | None | | | | L10V, I15V, K20R, M36I, R41K, I62V, L63T, E65ED, H69Q | F |
| Kousiappa (2011) | CY212 | CY212 | JF683762 | None | | | | L10V, K14R, E35D, M36I, R41K, K43R, R57K, Q61N, L63S, H69Q, V77I, L89M | F |
| | CY222 | CY222 | JF683771 | None | | | | L10V, T12V, I13V, I15V, E35D, M36I, R41K, K43R, R57K, L63T, E65D, I72T, L89M | F |
| Santos (2011) | J53 | J53_PR_RT | JN010443 | None | | | | L10V, E35D, M36I, R41K, L89M | F |
| | J54 | J54_PR_RT | JN010444 | None | | | | L10V, I15V, E35D, M36V, P39Q, R41K, R57K, Q61N, L63N, I72V, I93L | F |
| | J197 | J197_PR_RT | JN010604 | None | | | | L10V, T12K, I15V, E35D, M36I, R41K, Q61D, L63V, E65D | F |
| | J218 | J218_PR | JN010630 | None | | | | L10V, T12K, I15V, E35D, M36I, R41K, K55R, Q61D, L63V, E65D | F |
| | J341 | J341_PR_RT_CN | JN010721 | None | | | | L10V, T12N, I15V, M36I, R41K, Q61D | F |
| Ajoge (2012) | H32 | HP32 | HM854114 | None | | | | L10V, K20R, L33V, E35D, M36I, D60E, I62V, L63P, H69Q | F |
| Caron (2012) | Gab082183 | Gab082183 | HQ541936 | None | | | | L10V, T12N, I15V, K20R, E35D, M36I, R41K, I62V, L63S, L89M, I93L | F |
| da Silveira (2012) | BRMS48 | BRMS48 | JF342299 | None | | | | L10V, E35D, M36I, R41K, R57K, Q61N, L63S, I72IT | F |
| | BRMS56 | BRMS56 | JF342306 | None | | | | L10V, T12I, I13V, E35D, M36I, R41K, R57K, Q61D, L63P, L89M | F |
| De Gascun (2012) | IRL49110 | IRL49110 | JN622314 | None | | | | L10V, I13V, I15V, G16E, K20R, E35D, M36I, N37K, P39T, R41K, R57K, L63T, E65D, I72T, L89M | F |
| Alencar (2013) | RJ2-0015 | RJ2-0015 | JQ237944 | None | | | | L10V, I13V, I15V, Q18E, K20R, E35D, M36I, R41K, R57K, Q61N, L63I, E65D, I72T, L89M | F |
| | PE2-0009 | PE2-0009 | JQ237993 | None | | | | T4TP, L10V, K14R, I15V, E21D, E35D, M36I, R41K, R57K, Q61N, E65D, L89M | F |
| | PE2-0025 | PE2-0025 | JQ238049 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, Q61N, L89M | F |
| | PE2-0032 | PE2-0032 | JQ238051 | None | | | | L10V, I13V, I15V, E35ED, M36I, N37NK, R41K, Q61N, I72IT, L89M | F |
| | RJ2-0075 | RJ2-0075 | JQ238121 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, Q61N, L63A, I93L | F |
| | PE2-0066 | PE2-0066 | JQ238162 | None | | | | L10V, T12TIM, I15V, K20R, E35D, M36I, R41K, W42WG, R57K, D60DE, Q61DG, I62IV, L63X, L89M, I93L | F |
| | RJ2-093 | RJ2-093 | JQ238169 | None | | | | L10V, E35D, M36I, R41K, Q61N, I72V, L89M | F |
| | SP2-0068 | SP2-0068 | JQ238203 | None | | | | L10V, T12I, I13V, I15V, E35D, M36I, N37D, R41K, R57K, Q61N, L63CS, I72IT | F |
| Ferreira (2013) | BR09SP188 | BR09SP188 | HM533988 | None | | | | L10V, I15IV, G17E, K20R, E35D, M36I, R41K, R57K, Q61N, I62V, L63T, E65EK, I72IV, R87RK, I93L | F |
| | BR09SP92 | BR09SP92 | HM534075 | None | | | | L10V, T12MV, G16E, E35D, M36I, P39S, R41K, R57K, D60E, Q61N, I62V, I72V, V77I, L89M | F |
| | BR09SP362 | BR09SP362 | HM534188 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, Q61N, L63T, I64L, I72T, L89M, I93L | F |
| Frentz (2013) | EHR-00383 | EHR-00383 | JX299541 | None | | | | L10V, I15V, G16GE, G17GE, K20R, E35D, M36I, R41K, I62V, L63A, H69Q, L89M | F |
| | EHR-04128 | EHR-04128 | JX299614 | None | | | | L10V, T12S, I15V, L19Q, K20R, E35D, M36I, R41K, R57K, I62V, L63T, E65D, H69Y, L89M | F |
| | EHR-05034 | EHR-05034 | JX299627 | None | | | | L10V, I15V, E35D, M36I, P39S, R41K, R57K, Q61D, L63T, H69Y, I72T, L89M, I93L | F |
| | EHR-12004 | EHR-12004 | JX299734 | None | | | | L10V, K14R, G17E, E35D, M36I, R41K, R57K, L63T, E65D, I72AT, L89M | F |
| | EHR-21439 | EHR-21439 | JX299896 | None | | | | L10V, I15IV, K20KR, E35D, M36I, R41K, R57K, I62V, L63T, E65D, L89M | F |
| | EHR-23013 | EHR-23013 | JX299937 | None | | | | L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, V77I, L89M | F |
| | EHR-28690 | EHR-28690 | JX300038 | None | | | | L10V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T | F |
| | EHR-39038 | EHR-39038 | JX300205 | None | | | | L10V, I13V, K14R, I15V, K20R, E35D, M36I, R41K, R57K, Q61H, L63T, E65D, L89M | F |
| | EHR-42784 | EHR-42784 | JX300260 | None | | | | L10V, T12N, I15V, G16GE, K20R, E35D, M36I, R41K, R57K, I62V, L63T, E65D, L89M | F |
| | EHR-61454 | EHR-61454 | JX300566 | None | | | | L10V, K14R, E35D, M36I, R41K, K43R, R57K, Q61N, L63S, H69Q, V77I, L89M | F |
| | EHR-67058 | EHR-67058 | JX300667 | None | | | | L10V, I15V, G16E, E35D, M36I, R41K, R57K, Q61H, L63T, E65D, I72T, L89M | F |
| | EHR-67210 | EHR-67210 | JX300668 | None | | | | L10V, I13V, K14KR, I15V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, E65D, I72IT, L89M | F |
| | EHR-72070 | EHR-72070 | JX300760 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, L63T, E65D, I72V, T74S, L89M | F |
| | EHR-72812 | EHR-72812 | JX300779 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, P39S, R41K, R57K, L63T, E65D, I72T, L89M, L97F | F |
| | EHR-83444 | EHR-83444 | JX300955 | None | | | | L10V, T12K, K14R, I15V, L19I, E35D, M36I, R41K, R57K, L63T, E65D, T74S, L89M | F |
| | EHR-88771 | EHR-88771 | JX301047 | None | | | | L10V, I13V, I15V, G16E, E35D, M36I, R57K, L63T, E65D, I72T, L89M | F |
| | EHR-98971 | EHR-98971 | JX301153 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, I62V, L63V, E65D, T74S, L89M | F |
| | EHR-99469 | EHR-99469 | JX301158 | None | | | | L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, I62IV, H69Y, I72T, V77VI, L89M | F |
| Temereanca (2013) | SR1 | SR1 | JX966486 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, L63A, E65D, L89M, T91A | F |
| | SR12 | SR12 | JX966488 | None | | | | L10V, T12P, K14R, I15V, L19I, E35D, M36I, R41K, R57K, L63T, E65D, T74S, L89M, I93M | F |
| | SR17 | SR17 | JX966492 | None | | | | L10V, K14G, I15V, K20R, E35D, M36I, N37S, R41K, K45R, R57K, L63T, I64L, E65D, I72T, L89M | F |
| | SR18 | SR18 | JX966493 | None | | | | L10V, I15V, L19I, E35D, M36L, R41K, R57K, L63T, E65D, H69R, T74S, L89M | F |
| | SR1init | SR1init | JX966495 | None | | | | L10V, T12S, I13V, K14R, I15V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63T, E65D, I72T, L89M | F |
| | SR2 | SR2 | JX966496 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, I62V, L63I, L89M, T91N | F |
| | SR2init | SR2init | JX966506 | None | | | | L10V, T12K, I13V, I15V, G16E, L19I, E35D, M36I, R41K, R57K, L63T, E65D, T74S, L89M, Q92K | F |
| | SR35 | SR35 | JX966510 | None | | | V32L, I47K, I50N | T4I, L10V, V11M, I13V, I15V, K20R, L24F, D25A, E35D, M36I, R41K, K43Q, R57K, Q58H, L63T, E65D, K70R, I72T, L89M | F |
| | SR46 | SR46 | JX966522 | None | | | | L10V, I15V, E35D, M36I, R41K, R57K, L63T, E65D, T74S, L89M | F |
| | SR51 | SR51 | JX966524 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89M | F |
| | SR53 | SR53 | JX966525 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89M | F |
| | SR61 | SR61 | JX966528 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89M | F |
| | SR63 | SR63 | JX966529 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89M | F |
| | SR64 | SR64 | JX966530 | None | | | | L10V, I13V, I15V, E35D, M36I, R41K, K45R, R57K, L63S, E65D, L89M | F |
| | SR8 | SR8 | JX966534 | None | | | | L10V, I15V, K20R, E35D, M36I, R41K, R57K, Q61H, L63T, E65D, I72T, L89M, I93L | F |
| Tramuto (2013) | CV1312_92 | CV1312_92 | HQ667694 | None | | | | L10V, I13V, K14R, I15V, G16E, K20R, E35D, M36I, R41K, R57K, D60E, L63T, E65D, I72T, L89M | F |